BLASTX nr result
ID: Ephedra28_contig00029058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029058
(638 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519940.1| photosystem II protein D2 (chloroplast) [Eph... 343 3e-92
dbj|BAN16925.1| photosystem II protein D2 (chloroplast) [Gnetum ... 338 8e-91
ref|YP_008082180.1| photosystem II protein D2 (chloroplast) [Gne... 336 3e-90
ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirab... 335 7e-90
ref|YP_007475548.1| PsbD (chloroplast) [Podocarpus totara] gi|56... 334 1e-89
ref|YP_001542442.1| photosystem II protein D2 [Ceratophyllum dem... 334 1e-89
ref|YP_740470.1| photosystem II protein D2 [Citrus sinensis] gi|... 334 1e-89
ref|NP_904094.1| photosystem II protein D2 [Amborella trichopoda... 333 3e-89
ref|YP_003330957.1| photosystem II protein D2 [Parthenium argent... 333 3e-89
ref|YP_007474801.1| photosystem II protein D2 (chloroplast) [Tax... 333 3e-89
gb|AER45596.1| psbD (chloroplast) [Halocarpus kirkii] 333 3e-89
dbj|BAK86721.1| photosystem II protein D2 (chloroplast) [Sciadop... 333 3e-89
ref|YP_004891480.1| photosystem II protein D2 (chloroplast) [Tai... 333 3e-89
gb|ADD30582.1| photosystem II protein D2 [Euonymus americanus] g... 333 3e-89
gb|AGQ55670.1| photosystem II protein D2 (chloroplast) [Alstroem... 332 4e-89
ref|YP_007889856.1| photosystem II protein D2 [Francoa sonchifol... 332 4e-89
gb|AFU94456.1| PsbD, partial (chloroplast) [Medusagyne oppositif... 332 4e-89
ref|YP_008994068.1| photosystem II protein D2 (chloroplast) [Fri... 332 4e-89
gb|AEX95648.1| photosystem II protein D2 (chloroplast) [Phormium... 332 4e-89
gb|AER45597.1| psbD (chloroplast) [Agathis australis] 332 4e-89
>ref|YP_002519940.1| photosystem II protein D2 (chloroplast) [Ephedra equisetina]
gi|220983541|dbj|BAH11308.1| photosystem II protein D2
(chloroplast) [Ephedra equisetina]
Length = 353
Score = 343 bits (879), Expect = 3e-92
Identities = 166/178 (93%), Positives = 166/178 (93%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALGNFSKEEKTF FIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGNFSKEEKTFLDTLDDWLRRDRFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>dbj|BAN16925.1| photosystem II protein D2 (chloroplast) [Gnetum ula]
Length = 355
Score = 338 bits (867), Expect = 8e-91
Identities = 163/180 (90%), Positives = 165/180 (91%)
Frame = +2
Query: 98 IIMTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTS 277
+IMTIA G SKEEKTF F+FIGWSGLLLFPCAYFALGGWFTGTTFVTS
Sbjct: 1 MIMTIAFGKISKEEKTFLDILDDWLRRDRFVFIGWSGLLLFPCAYFALGGWFTGTTFVTS 60
Query: 278 WYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALH 457
WYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALH
Sbjct: 61 WYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALH 120
Query: 458 GAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
GAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 GAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 180
>ref|YP_008082180.1| photosystem II protein D2 (chloroplast) [Gnetum montanum]
gi|490345005|gb|AGL11025.1| photosystem II protein D2
(chloroplast) [Gnetum montanum]
Length = 353
Score = 336 bits (862), Expect = 3e-90
Identities = 162/178 (91%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIA G SKEEKTF F+FIGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIAFGKISKEEKTFLDILDDWLRRDRFVFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirabilis]
gi|221222715|sp|B2Y1U5.1|PSBD_WELMI RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|163311617|gb|ABY26775.1| photosystem II protein D2
[Welwitschia mirabilis] gi|220983405|dbj|BAH11174.1|
photosystem II protein D2 (chloroplast) [Welwitschia
mirabilis]
Length = 353
Score = 335 bits (859), Expect = 7e-90
Identities = 161/178 (90%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG FSK+EKT F+FIGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKFSKDEKTLLDVLDDWLRRDRFVFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVA HGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVAFHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_007475548.1| PsbD (chloroplast) [Podocarpus totara]
gi|568246253|ref|YP_008965025.1| photosystem II protein
D2 (chloroplast) [Agathis dammara]
gi|568247496|ref|YP_008965106.1| photosystem II protein
D2 (chloroplast) [Nageia nagi]
gi|347977318|dbj|BAK86776.1| photosystem II protein D2
(chloroplast) [Agathis dammara]
gi|347977831|dbj|BAK86669.1| photosystem II protein D2
(chloroplast) [Nageia nagi] gi|354991449|gb|AER45598.1|
psbD (chloroplast) [Podocarpus totara]
gi|449020348|gb|AGE65844.1| PsbD (chloroplast)
[Podocarpus totara] gi|563317609|dbj|BAO19709.1|
photosystem II protein D2 (chloroplast) [Agathis
dammara] gi|563317691|dbj|BAO19790.1| photosystem II
protein D2 (chloroplast) [Nageia nagi]
Length = 353
Score = 334 bits (857), Expect = 1e-89
Identities = 161/178 (90%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG SKEEKT F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKSSKEEKTLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_001542442.1| photosystem II protein D2 [Ceratophyllum demersum]
gi|221222629|sp|A8SE98.1|PSBD_CERDE RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|148508438|gb|ABQ81445.1| photosystem II protein D2
[Ceratophyllum demersum] gi|227481114|emb|CAP62493.1|
PSII D2 protein [Ceratophyllum demersum]
Length = 353
Score = 334 bits (856), Expect = 1e-89
Identities = 160/178 (89%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGRFTKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_740470.1| photosystem II protein D2 [Citrus sinensis]
gi|122166188|sp|Q09MI3.1|PSBD_CITSI RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|113952617|gb|ABI49015.1| photosystem II protein D2
[Citrus sinensis]
Length = 353
Score = 334 bits (856), Expect = 1e-89
Identities = 160/178 (89%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKFTKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|NP_904094.1| photosystem II protein D2 [Amborella trichopoda]
gi|75275913|sp|Q70Y08.1|PSBD_AMBTC RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|34481624|emb|CAD45102.1| PSII D2 protein [Amborella
trichopoda]
Length = 353
Score = 333 bits (854), Expect = 3e-89
Identities = 160/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG FSKEE F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGRFSKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_003330957.1| photosystem II protein D2 [Parthenium argentatum]
gi|269924833|gb|ACZ52706.1| photosystem II protein D2
[Parthenium argentatum]
Length = 199
Score = 333 bits (854), Expect = 3e-89
Identities = 159/182 (87%), Positives = 164/182 (90%)
Frame = +2
Query: 92 RRIIMTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFV 271
RRI MTIALG F+K+E F+F+GWSGLLLFPCAYFA+GGWFTGTTFV
Sbjct: 3 RRITMTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFV 62
Query: 272 TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVA 451
TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVA
Sbjct: 63 TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVA 122
Query: 452 LHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGV 631
LHGAFGLIGFMLRQFELARSVQLRPYNAIAFS PIAVFVSVFLIYPLGQSGWFFAPSFGV
Sbjct: 123 LHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGV 182
Query: 632 AA 637
AA
Sbjct: 183 AA 184
>ref|YP_007474801.1| photosystem II protein D2 (chloroplast) [Taxus mairei]
gi|372863279|gb|AEX99350.1| photosystem II protein D2
(chloroplast) [Taxus mairei] gi|372863356|gb|AEX99426.1|
photosystem II protein D2 (chloroplast) [Taxus mairei]
gi|372863520|gb|AEX99588.1| photosystem II protein D2
(chloroplast) [Taxus mairei]
Length = 353
Score = 333 bits (853), Expect = 3e-89
Identities = 160/178 (89%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG SKEE+T F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKSSKEEQTLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>gb|AER45596.1| psbD (chloroplast) [Halocarpus kirkii]
Length = 353
Score = 333 bits (853), Expect = 3e-89
Identities = 159/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTI LG + KEEKT F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTITLGKYPKEEKTLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>dbj|BAK86721.1| photosystem II protein D2 (chloroplast) [Sciadopitys verticillata]
Length = 353
Score = 333 bits (853), Expect = 3e-89
Identities = 160/178 (89%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG SKEE+T F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKSSKEEETIFDILDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_004891480.1| photosystem II protein D2 (chloroplast) [Taiwania cryptomerioides]
gi|512721486|ref|YP_008082107.1| photosystem II protein
D2 (chloroplast) [Cunninghamia lanceolata]
gi|512721782|ref|YP_008082397.1| photosystem II protein
D2 (chloroplast) [Taiwania flousiana]
gi|568246639|ref|YP_008965184.1| photosystem II protein
D2 (chloroplast) [Calocedrus formosana]
gi|347977383|dbj|BAK86814.1| photosystem II protein D2
(chloroplast) [Taiwania cryptomerioides]
gi|482841029|dbj|BAN16976.1| photosystem II protein D2
(chloroplast) [Calocedrus formosana]
gi|490344924|gb|AGL10953.1| photosystem II protein D2
(chloroplast) [Cunninghamia lanceolata]
gi|490345255|gb|AGL11243.1| photosystem II protein D2
(chloroplast) [Taiwania flousiana]
gi|563317769|dbj|BAO19867.1| photosystem II protein D2
(chloroplast) [Calocedrus formosana]
Length = 353
Score = 333 bits (853), Expect = 3e-89
Identities = 160/178 (89%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG SKEE+T F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKSSKEEQTLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>gb|ADD30582.1| photosystem II protein D2 [Euonymus americanus]
gi|408899216|gb|AFU94442.1| PsbD, partial (chloroplast)
[Elaeodendron orientale]
Length = 353
Score = 333 bits (853), Expect = 3e-89
Identities = 159/178 (89%), Positives = 163/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKFTKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAI+FSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>gb|AGQ55670.1| photosystem II protein D2 (chloroplast) [Alstroemeria aurea]
Length = 353
Score = 332 bits (852), Expect = 4e-89
Identities = 159/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGRFTKEEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFS PIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_007889856.1| photosystem II protein D2 [Francoa sonchifolia]
gi|386268360|gb|AFJ00466.1| photosystem II protein D2
[Francoa sonchifolia]
Length = 353
Score = 332 bits (852), Expect = 4e-89
Identities = 159/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKFTKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFS PIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>gb|AFU94456.1| PsbD, partial (chloroplast) [Medusagyne oppositifolia]
Length = 353
Score = 332 bits (852), Expect = 4e-89
Identities = 159/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKFAKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFS PIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>ref|YP_008994068.1| photosystem II protein D2 (chloroplast) [Fritillaria taipaiensis]
gi|374974765|gb|AFA27474.1| photosystem II protein D2,
partial [Lilium superbum] gi|474452187|gb|AGI51239.1|
photosystem II protein D2 (chloroplast) [Fritillaria
taipaiensis] gi|500050340|gb|AGL80003.1| photosystem II
protein D2 (chloroplast) [Fritillaria taipaiensis]
gi|500050428|gb|AGL80086.1| photosystem II protein D2
(chloroplast) [Fritillaria taipaiensis]
Length = 353
Score = 332 bits (852), Expect = 4e-89
Identities = 159/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGRFTKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFS PIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>gb|AEX95648.1| photosystem II protein D2 (chloroplast) [Phormium tenax]
gi|372484027|gb|AEX95655.1| photosystem II protein D2
(chloroplast) [Trichopetalum plumosum]
gi|372484047|gb|AEX95665.1| photosystem II protein D2
(chloroplast) [Brodiaea californica]
gi|372484049|gb|AEX95666.1| photosystem II protein D2
(chloroplast) [Dichelostemma capitatum]
gi|372484051|gb|AEX95667.1| photosystem II protein D2
(chloroplast) [Dichelostemma congestum]
gi|372484053|gb|AEX95668.1| photosystem II protein D2
(chloroplast) [Dichelostemma ida-maia]
gi|372484055|gb|AEX95669.1| photosystem II protein D2
(chloroplast) [Triteleia hyacinthina]
gi|372484057|gb|AEX95670.1| photosystem II protein D2
(chloroplast) [Xanthorrhoea preissii]
gi|374974781|gb|AFA27482.1| photosystem II protein D2,
partial [Phormium tenax]
Length = 353
Score = 332 bits (852), Expect = 4e-89
Identities = 159/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG F+KEEK F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKFAKEEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFS PIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178
>gb|AER45597.1| psbD (chloroplast) [Agathis australis]
Length = 353
Score = 332 bits (852), Expect = 4e-89
Identities = 160/178 (89%), Positives = 162/178 (91%)
Frame = +2
Query: 104 MTIALGNFSKEEKTFXXXXXXXXXXXXFIFIGWSGLLLFPCAYFALGGWFTGTTFVTSWY 283
MTIALG SKEEKT F+F+GWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1 MTIALGKSSKEEKTLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
Query: 284 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 463
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGA
Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
Query: 464 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 637
FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAA 178