BLASTX nr result
ID: Ephedra28_contig00029047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029047
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16549.1| unknown [Picea sitchensis] 119 5e-25
gb|ABK25569.1| unknown [Picea sitchensis] 118 9e-25
gb|ABK24422.1| unknown [Picea sitchensis] 107 1e-21
ref|XP_006482140.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_006430632.1| hypothetical protein CICLE_v10011615mg [Citr... 82 1e-13
ref|XP_006383312.1| hypothetical protein POPTR_0005s14380g, part... 79 5e-13
ref|XP_002301697.1| predicted protein [Populus trichocarpa] 79 5e-13
gb|EOY03976.1| Tetratricopeptide repeat-like superfamily protein... 77 3e-12
emb|CBI33534.3| unnamed protein product [Vitis vinifera] 75 7e-12
ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_004503139.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_004140363.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_006591332.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,... 69 8e-10
gb|ESW35390.1| hypothetical protein PHAVU_001G231300g [Phaseolus... 68 1e-09
gb|AFW73075.1| hypothetical protein ZEAMMB73_887223 [Zea mays] 67 2e-09
gb|ACR36806.1| unknown [Zea mays] 67 2e-09
>gb|ABR16549.1| unknown [Picea sitchensis]
Length = 524
Score = 119 bits (297), Expect = 5e-25
Identities = 56/117 (47%), Positives = 74/117 (63%)
Frame = +2
Query: 38 PPQSSSFTLIASKQTGMDLGQYPQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKIT 217
PP S K+ G+D QYP TMP E ++++ILK PP MG + A LN +++
Sbjct: 48 PPVQSPQPAQVLKEPGLDPSQYPPTMPIEMIVSNILKKPPRMGVENA----LNELGLEVS 103
Query: 218 SELIEDVLKHMYGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWDC 388
+ +EDVLK YG G EA++FF+WSGL+L KH P WNLL+D LG+ FD MWDC
Sbjct: 104 IQFVEDVLKLSYGAGMEAMKFFRWSGLKLSRKHSPLAWNLLVDLLGKEKLFDAMWDC 160
>gb|ABK25569.1| unknown [Picea sitchensis]
Length = 541
Score = 118 bits (295), Expect = 9e-25
Identities = 56/117 (47%), Positives = 77/117 (65%)
Frame = +2
Query: 38 PPQSSSFTLIASKQTGMDLGQYPQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKIT 217
PP SS K+ G+D QYP TMP E ++++ILK PP MG + A++ L R+ ++
Sbjct: 69 PPVQSSQRPRVPKEPGLDRSQYPPTMPIEMIVSNILKKPPRMGVENALNEL---RLG-VS 124
Query: 218 SELIEDVLKHMYGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWDC 388
+ +EDVLK YG G EA++FF+W+GL+L KH P WNLL+D LG+ FD MWDC
Sbjct: 125 IQFVEDVLKLSYGAGMEAVKFFRWAGLKLTRKHSPLAWNLLVDLLGKEKLFDAMWDC 181
>gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 107 bits (268), Expect = 1e-21
Identities = 50/105 (47%), Positives = 67/105 (63%)
Frame = +2
Query: 74 KQTGMDLGQYPQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMY 253
K G+D QYP T P E ++++ILK PP MG ++ LN ++ + +EDVLK Y
Sbjct: 34 KGPGLDPSQYPPTTPIEVIVSNILKKPPQMG----IENTLNGLGLGVSIKFVEDVLKLSY 89
Query: 254 GHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWDC 388
G G EA++FF+W+GL+L KH P WNLL+D LG FD MWDC
Sbjct: 90 GAGMEAMKFFRWAGLKLSSKHSPLAWNLLVDLLGSDKLFDAMWDC 134
>ref|XP_006482140.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Citrus sinensis]
Length = 482
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P PT K + I+ N PS V+ +L+ + +++ E +E VLK Y H A++FF
Sbjct: 33 PNLPPTIKTLCEIIANTPS----PTVEDVLDKTLIRVSQETVEQVLKFSYSHPGPAVKFF 88
Query: 284 KWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+WS +L KH P WNL++D LG++ FD MWD
Sbjct: 89 RWSAYQLNDKHSPYAWNLVVDLLGKNCLFDAMWD 122
>ref|XP_006430632.1| hypothetical protein CICLE_v10011615mg [Citrus clementina]
gi|557532689|gb|ESR43872.1| hypothetical protein
CICLE_v10011615mg [Citrus clementina]
Length = 482
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P PT K + I+ N PS V+ +L+ + +++ E +E VL+ Y H A++FF
Sbjct: 33 PNLPPTIKTLCEIIANTPS----PTVEDVLDKTLIRVSQETVEQVLRFSYSHPGPAVKFF 88
Query: 284 KWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+WS +L KH P WNL++D LGR+ FD MWD
Sbjct: 89 RWSAYQLNDKHSPYAWNLVVDLLGRNCLFDAMWD 122
>ref|XP_006383312.1| hypothetical protein POPTR_0005s14380g, partial [Populus
trichocarpa] gi|550338919|gb|ERP61109.1| hypothetical
protein POPTR_0005s14380g, partial [Populus trichocarpa]
Length = 497
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +2
Query: 41 PQSSSFTLIASKQTGMDLGQYPQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITS 220
P SSS T S Q+ ++ P PT K++ I+ N PS V+++L+ + ++
Sbjct: 28 PSSSSITKKPSFQSYLETPNLP---PTIKLLCEIIANTPSHN----VESVLDATVIRVKQ 80
Query: 221 ELIEDVLKHMYGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMW 382
+E VLK Y A++FF+W+GL+L KH P +WNL++D LG++ FD MW
Sbjct: 81 TDVEQVLKLSYSSPGSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMW 134
>ref|XP_002301697.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +2
Query: 41 PQSSSFTLIASKQTGMDLGQYPQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITS 220
P SSS T S Q+ ++ P PT K++ I+ N PS V+++L+ + ++
Sbjct: 28 PSSSSITKKPSFQSYLETPNLP---PTIKLLCEIIANTPSHN----VESVLDATVIRVKQ 80
Query: 221 ELIEDVLKHMYGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMW 382
+E VLK Y A++FF+W+GL+L KH P +WNL++D LG++ FD MW
Sbjct: 81 TDVEQVLKLSYSSPGSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMW 134
>gb|EOY03976.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 485
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P K++ I+ PS + V+ LL ++T +E+VLK Y +A++FF
Sbjct: 36 PNIQPKVKLLCEIISTTPS----STVEALLEGAGLRVTQPDVENVLKLSYSFPSQAVKFF 91
Query: 284 KWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+WSG +L H+H P +WNL++D LG++ FD MWD
Sbjct: 92 RWSGYQLQHQHSPYSWNLVVDLLGKNGLFDAMWD 125
>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P +++ I+ N PS + V+ +L+ +++ E +ED LK YG A++FF
Sbjct: 57 PNLSPKVRLLCEIIANTPS----STVEEVLHDTAIRVSPEDVEDSLKLSYGFPGSAVKFF 112
Query: 284 KWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+WSG +L H P +WNL++D LG++ FD MWD
Sbjct: 113 RWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWD 146
>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 502
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P +++ I+ N PS + V+ +L+ +++ E +ED LK YG A++FF
Sbjct: 53 PNLSPKVRLLCEIIANTPS----STVEEVLHDTAIRVSPEDVEDSLKLSYGFPGSAVKFF 108
Query: 284 KWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+WSG +L H P +WNL++D LG++ FD MWD
Sbjct: 109 RWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWD 142
>ref|XP_004503139.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cicer arietinum]
Length = 482
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = +2
Query: 104 PQTMPTEKV--IASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALR 277
P+ +P K+ + I+ PS+ V+ L +T + +E VLK Y +A++
Sbjct: 31 PKPLPLSKIKSLFEIISTNPSL----TVEKSLEESSINVTPQDVEQVLKLSYRFPAQAVK 86
Query: 278 FFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
FF+WSG R+ H H P WNL+ID LG++ FD MWD
Sbjct: 87 FFRWSGHRINHNHTPYAWNLVIDILGKNCLFDAMWD 122
>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 485
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Frame = +2
Query: 41 PQSSSFTLIASKQTGMDLGQYPQTMPTEKVIASILKNPPSM------GTDTAVDTLLNMR 202
P SSS + I+ K PQT P+ + I ++ N S+ + +V+ L
Sbjct: 14 PSSSSPSPISKK---------PQTFPSFQDIPNLPSNIKSLCHLIATTSAASVEHSLQSA 64
Query: 203 MSKITSELIEDVLKHMYGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMW 382
+T +E+VLK YG +A++FF+WSG L H P +WNL++D LG++ FD MW
Sbjct: 65 AISVTPHDVEEVLKLSYGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDAMW 124
Query: 383 D 385
D
Sbjct: 125 D 125
>ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like, partial [Cucumis sativus]
Length = 391
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 125 KVIASILKNPPSMGTDTAV-DTLLNMRMSKITSELIEDVLKHMYGHGPEALRFFKWSGLR 301
K++ I+ N PS+ + A+ DT ++ T + +E+VLK Y +++FF+WSG +
Sbjct: 75 KLMCEIIANSPSLDVEKALEDTGIHA-----TQQDVEEVLKLSYRFPGSSVKFFRWSGRK 129
Query: 302 LGHKHLPATWNLLIDCLGRSLNFDQMWD 385
L +H P WNL+ID LG++L FD MWD
Sbjct: 130 LNDQHSPYAWNLIIDMLGKNLYFDPMWD 157
>ref|XP_004140363.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 125 KVIASILKNPPSMGTDTAV-DTLLNMRMSKITSELIEDVLKHMYGHGPEALRFFKWSGLR 301
K++ I+ N PS+ + A+ DT ++ T + +E+VLK Y +++FF+WSG +
Sbjct: 75 KLMCEIIANSPSLDVEKALEDTGIHA-----TQQDVEEVLKLSYRFPGSSVKFFRWSGRK 129
Query: 302 LGHKHLPATWNLLIDCLGRSLNFDQMWD 385
L +H P WNL+ID LG++L FD MWD
Sbjct: 130 LNDQHSPYAWNLIIDMLGKNLYFDPMWD 157
>ref|XP_006591332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 458
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Frame = +2
Query: 92 LGQYPQTMPTEKVIASILKNPPSM-------GTDTAVDTLLNMRMSKITSELIEDVLKHM 250
+ + PQT P+ + I ++ N S+ T +L + +S I + +E+VLK
Sbjct: 23 ISKKPQTFPSFQDIPNLPSNIKSLCHLIATTSAATVEHSLQSAAISVIPHD-VEEVLKLS 81
Query: 251 YGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
YG ++++FF+WSG L H P +WNL++D LGR+ FD MWD
Sbjct: 82 YGFPGQSVKFFRWSGRHLNDNHTPYSWNLVVDILGRNRFFDPMWD 126
>ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 488
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P +++ IL +P T V+ L+ ++T+ +E VL+ Y H A FF
Sbjct: 37 PDLPPKIRLLCEILASPA-----TDVEAALDDAAVRVTTSDVEQVLRFSYAHPRGAAAFF 91
Query: 284 KWSGLR-LGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+W+G R L H+H P +WNL+ID LG++ FD MWD
Sbjct: 92 RWAGHRHLRHQHSPYSWNLVIDLLGKNRLFDPMWD 126
>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 510
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/94 (35%), Positives = 53/94 (56%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P K++ I+ PS + V+T+L+ ++ +E V+K Y A++FF
Sbjct: 61 PNLSPKIKLLCEIIAKIPS----STVETILDETGLYVSQYDVEQVIKLSYSFPGPAVKFF 116
Query: 284 KWSGLRLGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+W+G RL H P +WNL++D LG++ FD MWD
Sbjct: 117 RWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWD 150
>gb|ESW35390.1| hypothetical protein PHAVU_001G231300g [Phaseolus vulgaris]
Length = 489
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = +2
Query: 176 AVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFFKWSGLRLGHKHLPATWNLLIDCLG 355
A++ L + IT + +E+VLK YG +A++FF+WSG L H P +WNL++D LG
Sbjct: 57 AIEHALQCADAAITPQDVEEVLKLSYGFPGQAVKFFRWSGRHLRDNHTPYSWNLVVDILG 116
Query: 356 RSLNFDQMWD 385
++ FD MWD
Sbjct: 117 KNRFFDAMWD 126
>gb|AFW73075.1| hypothetical protein ZEAMMB73_887223 [Zea mays]
Length = 492
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P ++ IL S D ++ L+ +++ +E VL+ Y H A FF
Sbjct: 39 PDMAPKTRIFCDILA---SRADDEELNAELDKADIRVSIADVEQVLRFSYAHPRAAAAFF 95
Query: 284 KWSGLR-LGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+W+G R LGH+H P +WNLL+D LG++ F+ MWD
Sbjct: 96 RWAGYRYLGHEHSPYSWNLLVDILGKNRLFEPMWD 130
>gb|ACR36806.1| unknown [Zea mays]
Length = 369
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 104 PQTMPTEKVIASILKNPPSMGTDTAVDTLLNMRMSKITSELIEDVLKHMYGHGPEALRFF 283
P P ++ IL S D ++ L+ +++ +E VL+ Y H A FF
Sbjct: 39 PDMAPKTRIFCDILA---SRADDEELNAELDKADIRVSIADVEQVLRFSYAHPRAAAAFF 95
Query: 284 KWSGLR-LGHKHLPATWNLLIDCLGRSLNFDQMWD 385
+W+G R LGH+H P +WNLL+D LG++ F+ MWD
Sbjct: 96 RWAGYRYLGHEHSPYSWNLLVDILGKNRLFEPMWD 130