BLASTX nr result
ID: Ephedra28_contig00028831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028831
(453 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japo... 83 3e-14
gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indi... 83 3e-14
gb|ADE76416.1| unknown [Picea sitchensis] 83 4e-14
ref|XP_006656336.1| PREDICTED: tRNA pseudouridine synthase A, mi... 80 2e-13
gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus pe... 79 5e-13
ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [A... 78 1e-12
ref|XP_003563355.1| PREDICTED: tRNA pseudouridine synthase A-lik... 78 1e-12
gb|EMT12212.1| Protein kinase APK1B, chloroplastic [Aegilops tau... 77 2e-12
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622... 76 4e-12
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr... 76 4e-12
ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-lik... 76 4e-12
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592... 76 5e-12
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik... 76 5e-12
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 75 9e-12
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus... 75 9e-12
dbj|BAJ85114.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 9e-12
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun... 75 9e-12
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 75 1e-11
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 75 1e-11
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 75 1e-11
>dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japonica Group]
Length = 495
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 143
+REAAAGA+ + LNLMEATCRRA+APPAPPDGLCLVDVGYED N +
Sbjct: 365 IREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQ 411
>gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indica Group]
gi|125598125|gb|EAZ37905.1| hypothetical protein
OsJ_22255 [Oryza sativa Japonica Group]
Length = 417
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 143
+REAAAGA+ + LNLMEATCRRA+APPAPPDGLCLVDVGYED N +
Sbjct: 365 IREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQ 411
>gb|ADE76416.1| unknown [Picea sitchensis]
Length = 448
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFLI 161
VREAAAGA P+ L LM ATCRRASAPPAPP+GLCLVD+GY DIN EN FLI
Sbjct: 398 VREAAAGATPDNLLKLMHATCRRASAPPAPPEGLCLVDIGYTDINQEN--FLI 448
>ref|XP_006656336.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Oryza
brachyantha]
Length = 364
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 143
+REAAAGA+ + LNLMEATCRRA+APPAPP+GLCLVDVGY+D N +
Sbjct: 312 IREAAAGAEEDALLNLMEATCRRATAPPAPPEGLCLVDVGYDDFNRQ 358
>gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
Length = 409
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/52 (67%), Positives = 44/52 (84%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFL 158
+REAAAGAD + L LM+ATCRRA+APPAPPDGLCLVDVGYE+ + ++ + L
Sbjct: 356 IREAAAGADEDALLKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLIL 407
>ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [Amborella trichopoda]
gi|548854646|gb|ERN12556.1| hypothetical protein
AMTR_s00025p00208060 [Amborella trichopoda]
Length = 371
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENS 149
+REAAAGA ++ L LM+ATCRRA+APPAPPDGLCLVDVGYED N+
Sbjct: 320 IREAAAGAGDDVLLRLMDATCRRATAPPAPPDGLCLVDVGYEDFKPGNT 368
>ref|XP_003563355.1| PREDICTED: tRNA pseudouridine synthase A-like [Brachypodium
distachyon]
Length = 410
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/54 (64%), Positives = 46/54 (85%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFLIN 164
+REAAAGA+ ++ LNLMEATCRRA+APPAP +GLCL DVGYED N++ F+++
Sbjct: 358 IREAAAGAEDDVLLNLMEATCRRATAPPAPAEGLCLADVGYEDF-NKHKCFIVD 410
>gb|EMT12212.1| Protein kinase APK1B, chloroplastic [Aegilops tauschii]
Length = 914
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/54 (66%), Positives = 45/54 (83%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFLIN 164
+REAAAGAD + LNLM+ATCRRA+APPAP +GLCLVDVGYED +E F+++
Sbjct: 862 IREAAAGADEDALLNLMDATCRRATAPPAPAEGLCLVDVGYEDF-DEQRCFIVD 914
>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
Length = 454
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 152
VREAAAGAD + L L++ATCRRA+APPAPP+GLCLVDVGY + + +NS+
Sbjct: 403 VREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNFDPQNSL 452
>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
gi|557556408|gb|ESR66422.1| hypothetical protein
CICLE_v10008288mg [Citrus clementina]
Length = 447
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 152
VREAAAGAD + L L++ATCRRA+APPAPP+GLCLVDVGY + + +NS+
Sbjct: 396 VREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNFDPQNSL 445
>ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
subsp. vesca]
Length = 410
Score = 76.3 bits (186), Expect = 4e-12
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDIN 137
+REAAAGAD + + LM+ATCRRA+APPAPPDGLCLVDVGYE+ +
Sbjct: 357 IREAAAGADEDALIKLMDATCRRATAPPAPPDGLCLVDVGYEEFD 401
>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
Length = 436
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYED 131
+REAAAGAD + L LM+ATCRRA+APPAPPDGLCLVDVGY D
Sbjct: 385 IREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTD 427
>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
lycopersicum]
Length = 436
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYED 131
+REAAAGAD + L LM+ATCRRA+APPAPPDGLCLVDVGY D
Sbjct: 385 IREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTD 427
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 152
+REAAAGA+ + L LM+ATCRRA+APPAPPDGLCLVDVGY + N +
Sbjct: 393 IREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCLVDVGYSEFKPNNCL 442
>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
Length = 440
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFLI 161
+REAAAGA+ + + LM+ATCRRA+APPAPPDGLCLVDVGY + + + LI
Sbjct: 387 IREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFILI 439
>dbj|BAJ85114.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 143
+REAAAGA+ + LNLM+ATCRRA+APPAP +GLCLVDVGYED + +
Sbjct: 169 IREAAAGANEDALLNLMDATCRRATAPPAPAEGLCLVDVGYEDFDEQ 215
>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase
A [Medicago truncatula]
Length = 400
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFL 158
+REAAAGA+ + L LM+ATCRRA+APPAPPDGLCLVDVGY + E +
Sbjct: 347 IREAAAGAEDDALLKLMDATCRRATAPPAPPDGLCLVDVGYAEFEREKCFIM 398
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 444
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSIFLI 161
+REAAAGA+ + + LM+ATCRRA+APPAPPDGLCLVDVGY + + LI
Sbjct: 391 IREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFILI 443
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 152
VREAAAGA + L LM+ATCRRA+APPAPPDGLCLVDVGY + + N +
Sbjct: 406 VREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCL 455
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 3 VREAAAGADPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 152
VREAAAGA + L LM+ATCRRA+APPAPPDGLCLVDVGY + + N +
Sbjct: 397 VREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCL 446