BLASTX nr result
ID: Ephedra28_contig00028821
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028821
(383 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus pe... 59 5e-07
gb|EMJ17472.1| hypothetical protein PRUPE_ppa017372mg, partial [... 59 9e-07
ref|XP_006338777.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
gb|EPS66249.1| hypothetical protein M569_08528 [Genlisea aurea] 58 2e-06
ref|XP_004237581.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-05
>gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus persica]
Length = 772
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = -1
Query: 368 VHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISSYTKNMLD 189
+ P+++T + IK LCR H R A+ + +M + PD T++ I D
Sbjct: 205 IKPDVSTFNILIKALCRAHQIRPALLLMEEMSNHGLSPDEKTFTTLMQGYIEEG-----D 259
Query: 188 NAKAQEIVDALLE-SCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSHGFST 12
A + D ++E CP + + + V C GK EA + KM +GFS D F+T
Sbjct: 260 MKGALRMRDQMVEYGCPWTNVTINVLVNGFCKEGKVEEALSFIEKMSNEGFSPDQFTFNT 319
Query: 11 LV 6
LV
Sbjct: 320 LV 321
>gb|EMJ17472.1| hypothetical protein PRUPE_ppa017372mg, partial [Prunus persica]
Length = 601
Score = 58.5 bits (140), Expect = 9e-07
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Frame = -1
Query: 380 GKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISSY-T 204
G++ +HPN+ T + I LC+ + +FL KM E PD+V ++T LISSY
Sbjct: 219 GRIGIHPNVYTFNILINVLCKDGDVDKVNAFLEKMEEEGFDPDIVTYNT----LISSYCR 274
Query: 203 KNMLDNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSH 24
K L++A + PD ++A+ + LC GK EA ++ +M +G D+
Sbjct: 275 KGRLEDAFYLYKIMYRRGVMPDMVSYTAL-MNGLCKQGKVREAHQIFHRMIDRGLDPDTV 333
Query: 23 GFSTLVN 3
++TL++
Sbjct: 334 SYNTLIS 340
>ref|XP_006338777.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Solanum tuberosum]
Length = 730
Score = 57.8 bits (138), Expect = 2e-06
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = -1
Query: 374 LNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISSYTKNM 195
L + P + TC IK CR + A F KM+ + + PD + ++T++D I +NM
Sbjct: 582 LGIKPTIVTCNSIIKGYCRSGDASRAAKFRNKMQSQGLFPDSITYNTLLDGFIRE--ENM 639
Query: 194 LDNAKAQEIVDALLES--CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSHG 21
AKA ++V+ + PD ++ I + C G+ EA LYRKM +G + D
Sbjct: 640 ---AKALDLVNEMGNQGLSPDVISYNTI-LDGFCKFGRMQEANMLYRKMVERGINPDRST 695
Query: 20 FSTLVN 3
+++L+N
Sbjct: 696 YTSLIN 701
>gb|EPS66249.1| hypothetical protein M569_08528 [Genlisea aurea]
Length = 702
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = -1
Query: 368 VHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLI-SSYTKNML 192
+ PN+ C IK CR ++ + A+ FL KMR R I PD + ++T+I + + ++
Sbjct: 559 ISPNIVICNSLIKGYCRNNDTKKALRFLEKMRSRGIEPDRITYNTLIHGFMKEENVEAVV 618
Query: 191 DNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSHGFST 12
+ A+A+++V L+S + I + C G+ A ++Y KM +GF + F++
Sbjct: 619 ELAEAEKVV---LDS-----VTFHIMIDQFCRSGRMRGAVSMYEKMMKEGFRPERSVFTS 670
Query: 11 LVN 3
L+N
Sbjct: 671 LIN 673
>ref|XP_004237581.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Solanum lycopersicum]
Length = 738
Score = 56.6 bits (135), Expect = 3e-06
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Frame = -1
Query: 374 LNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISSYTKNM 195
L + P + TC IK CR + A FL KM+ + + PD + ++T++D LI +NM
Sbjct: 590 LGIKPTIVTCNSIIKGYCRCGDTSRAAKFLNKMQIQGLFPDSITYNTLLDGLIRE--ENM 647
Query: 194 LDNAKAQEIVDALLES--CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSHG 21
KA ++V+ + + PD ++ I + C G+ EA LY KM +G + D
Sbjct: 648 ---DKALDLVNEMGKQGLSPDVFSYNTI-LDGFCKFGRMQEANMLYSKMVERGINPDRST 703
Query: 20 FSTLVN 3
+++L+N
Sbjct: 704 YTSLIN 709
>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/122 (27%), Positives = 53/122 (43%)
Frame = -1
Query: 368 VHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISSYTKNMLD 189
+ P++TT + IK LCR H R AI + +M + PD T++ I N
Sbjct: 207 IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGAL 266
Query: 188 NAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSHGFSTL 9
+ Q + CP S + + V C G+ E + +M +GF D F++L
Sbjct: 267 RIREQMVA----AGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSL 322
Query: 8 VN 3
VN
Sbjct: 323 VN 324
>ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 761
Score = 55.1 bits (131), Expect = 1e-05
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = -1
Query: 368 VHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISSYTKNMLD 189
+ P+++T + IK LCR H R A+ + +M + PD TI+ I +
Sbjct: 193 IKPDVSTFNILIKALCRAHQIRPALLLMEEMGSYGLKPDEKTFTTIMQGYIEEG-----E 247
Query: 188 NAKAQEIVDALLE-SCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLDSHGFST 12
A I + ++E C S + + V C G+ EAF KM +GFS D + F+T
Sbjct: 248 MKGALRIREQMVEYGCHCSNVTVNVLVNGFCKEGRVDEAFGFIEKMAKEGFSPDQYTFNT 307
Query: 11 LV 6
LV
Sbjct: 308 LV 309