BLASTX nr result
ID: Ephedra28_contig00028758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028758
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
gb|ESW20346.1| hypothetical protein PHAVU_006G201000g [Phaseolus... 72 1e-10
gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japo... 71 1e-10
gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indi... 71 1e-10
ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group] g... 71 1e-10
ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_004983795.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,... 70 3e-10
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ... 70 3e-10
ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581... 70 4e-10
gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein... 70 4e-10
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251... 70 4e-10
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 70 4e-10
gb|ABR17838.1| unknown [Picea sitchensis] 69 5e-10
ref|XP_004959800.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
gb|EMT12987.1| hypothetical protein F775_06874 [Aegilops tauschii] 69 6e-10
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/97 (40%), Positives = 60/97 (61%)
Frame = +3
Query: 30 EEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDL 209
EEIE + YV ++L +SAC ++ ++K G +HG+ F+ G SVG+AL NMYA L
Sbjct: 350 EEIEPN-YV-TLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCL 407
Query: 210 DTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTLAV 320
+ SR++F MP + V+WSS+I+ G G+ L +
Sbjct: 408 NGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQI 444
>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/97 (37%), Positives = 61/97 (62%)
Frame = +3
Query: 24 EKEEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSN 203
+ E+++ D Y+ +++ +SAC S+GA+ G +H R G+ + S+ +AL +MYA
Sbjct: 322 QAEKVDFD-YI-TMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCG 379
Query: 204 DLDTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTL 314
++D +R VFER+PC VSW+S+I C + G+D L
Sbjct: 380 NIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDAL 416
>ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Fragaria vesca subsp. vesca]
Length = 764
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = +3
Query: 54 VDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFE 233
V ++LG L C + A ++G IHG FRLG SD VG+AL MY+ L+TS RVFE
Sbjct: 519 VATMLGILPVCSLLAAKRKGQEIHGCIFRLGYHSDVPVGNALIEMYSSCGSLETSIRVFE 578
Query: 234 RMPCNEGVSWSSVIATCGTSKFGKDTL 314
+M + V+W+S+I+ GT G+ L
Sbjct: 579 QMCIKDVVTWTSLISAYGTYGEGEKAL 605
>gb|ESW20346.1| hypothetical protein PHAVU_006G201000g [Phaseolus vulgaris]
Length = 607
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERM 239
++L +SAC +I ++K G +HGH F+ G + SVG+AL NMYA LD SR++F M
Sbjct: 359 TLLAVISACTNISSLKCGCGLHGHVFKCGFSFSISVGNALINMYAKCGCLDGSRKIFLEM 418
Query: 240 PCNEGVSWSSVIATCGTSKFGKDTL 314
+ V+WSS+I G GK L
Sbjct: 419 WNRDSVTWSSLINAYGLHGCGKQAL 443
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 66 LGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSND-LDTSRRVFERMP 242
+ L AC + G +K G IHG+AFR G S + SAL NMY + L + +FE
Sbjct: 259 IALLQACAAPGFLKHGKEIHGYAFRRGFESCSTFSSALINMYCHCGESLHLAELIFEGSC 318
Query: 243 CNEGVSWSSVIAT 281
C + V WSSVI +
Sbjct: 319 CRDVVLWSSVIGS 331
>gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/87 (40%), Positives = 56/87 (64%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERM 239
++ G LSAC ++GA++ G+ + G+A R G+ S+ VG+AL +MYA DLD + VF +M
Sbjct: 357 TLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKM 416
Query: 240 PCNEGVSWSSVIATCGTSKFGKDTLAV 320
PC SW+++I CG + G+ A+
Sbjct: 417 PCKNVASWNALI--CGLAFNGRGDEAI 441
>gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/87 (40%), Positives = 56/87 (64%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERM 239
++ G LSAC ++GA++ G+ + G+A R G+ S+ VG+AL +MYA DLD + VF +M
Sbjct: 357 TLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKM 416
Query: 240 PCNEGVSWSSVIATCGTSKFGKDTLAV 320
PC SW+++I CG + G+ A+
Sbjct: 417 PCKNVASWNALI--CGLAFNGRGDEAI 441
>ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa
Japonica Group]
Length = 767
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/87 (40%), Positives = 56/87 (64%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERM 239
++ G LSAC ++GA++ G+ + G+A R G+ S+ VG+AL +MYA DLD + VF +M
Sbjct: 357 TLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKM 416
Query: 240 PCNEGVSWSSVIATCGTSKFGKDTLAV 320
PC SW+++I CG + G+ A+
Sbjct: 417 PCKNVASWNALI--CGLAFNGRGDEAI 441
>ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Oryza brachyantha]
Length = 749
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = +3
Query: 30 EEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDL 209
E+++ +Y + GA++ACG +GA+K G +H H R G + S G+AL MYA +
Sbjct: 371 EDVKPCDY--TYAGAIAACGELGALKHGRQLHAHLVRCGFEASNSAGNALLTMYAKCGAV 428
Query: 210 DTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTL 314
+R VF MP + VSW+++I+ G +G++ L
Sbjct: 429 KDARVVFLVMPNVDSVSWNAMISALGQHGYGREAL 463
>ref|XP_004983795.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Setaria italica]
Length = 680
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 27 KEEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSND 206
++ +E DE V ++G + AC ++G + GAS+HG+ R G+ D ++L +MYA +
Sbjct: 201 EDGVEGDEVV--MVGVIQACAAVGNAQMGASVHGYLLRHGMRMDVFTSTSLVDMYAKNRQ 258
Query: 207 LDTSRRVFERMPCNEGVSWSSVIA 278
D +RRVF MP VSWS++I+
Sbjct: 259 FDVARRVFRMMPYRNAVSWSALIS 282
>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 2000
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +3
Query: 75 LSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERMPCNEG 254
L AC S ++ +G ++HG +LGI D VG+AL++MYA S D+++S++VF RMP
Sbjct: 455 LCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNE 514
Query: 255 VSWSSVIATCGTSKFGKDTLAV 320
VSW+++I S +++L +
Sbjct: 515 VSWTAMIQGLAESGLAEESLTL 536
>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 622
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/101 (37%), Positives = 57/101 (56%)
Frame = +3
Query: 12 KANTEKEEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMY 191
K TE+ E YV ++L +SAC ++ + K G IHG+ + GI V +AL NMY
Sbjct: 365 KMRTEETE---PNYV-TLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMY 420
Query: 192 ADSNDLDTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTL 314
A LD SR++F MP + V+W+S+I+ G +G+ L
Sbjct: 421 AKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQAL 461
>ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581133 [Solanum tuberosum]
Length = 1891
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/82 (37%), Positives = 55/82 (67%)
Frame = +3
Query: 75 LSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERMPCNEG 254
L AC S+ ++++G + HG A +LG SD V +AL +MYA S D+++++++F+RMP
Sbjct: 394 LCACASLASLERGKNSHGKAIKLGFHSDIFVDTALVDMYAKSGDVESAKKIFKRMPKRNE 453
Query: 255 VSWSSVIATCGTSKFGKDTLAV 320
+SW+++I + F ++ LAV
Sbjct: 454 ISWTAMIQGLAENGFAEEALAV 475
>gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 946
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/95 (40%), Positives = 53/95 (55%)
Frame = +3
Query: 36 IEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDT 215
IE D +V S L L+AC ++ A +QG +H H + G SD G++L NMYA +D
Sbjct: 570 IEPDPFVGSSL--LNACANLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIDD 627
Query: 216 SRRVFERMPCNEGVSWSSVIATCGTSKFGKDTLAV 320
+ RVF ++P VSWSS+I GK+ L V
Sbjct: 628 ADRVFSKIPERGIVSWSSMIGGLAQHGHGKEALRV 662
>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cicer arietinum]
Length = 1334
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDES-VGSALSNMYADSNDLDTSRRVFER 236
+V+G LSAC S+GA++ G+S+H AF+ G+ S VG+AL N YA + + +R VF+
Sbjct: 439 TVVGVLSACASVGALQIGSSLHAFAFKYGLVSCSIYVGTALLNFYAKCGEANLARMVFDT 498
Query: 237 MPCNEGVSWSSVIATCGTSKFGKDTLAV 320
M V+WS++I CG G +LA+
Sbjct: 499 MGEKNAVTWSAMIGGCGMQGDGVGSLAL 526
>ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251951 [Solanum
lycopersicum]
Length = 1933
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/82 (37%), Positives = 54/82 (65%)
Frame = +3
Query: 75 LSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERMPCNEG 254
L AC S+ ++++G + HG A +LG SD + +AL +MYA S D++++ ++F+RMP
Sbjct: 454 LCACASLASLERGKNSHGKAIKLGFHSDIFIDTALVDMYAKSGDVESATKIFKRMPKRNE 513
Query: 255 VSWSSVIATCGTSKFGKDTLAV 320
+SW+++I + F K+ LAV
Sbjct: 514 ISWTAMIQGLAENGFAKEALAV 535
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = +3
Query: 75 LSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERMPCNEG 254
LSAC SIGA++QG +H H + G+ +G+ L +MYA + +D ++RVF+R+ +
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 255 VSWSSVIATCGTSKFGKDTL 314
VSW++++ C GK+TL
Sbjct: 357 VSWNTMLTGCAQHGLGKETL 376
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/99 (34%), Positives = 61/99 (61%)
Frame = +3
Query: 24 EKEEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSN 203
+ + I+ D + +++ L AC A++QG IHG+ R G S+ VG+ L ++YA
Sbjct: 415 QAQGIKPDSF--AIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCG 472
Query: 204 DLDTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTLAV 320
+++T++++FERMP + VSW+++I G G+D LA+
Sbjct: 473 NVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALAL 511
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/81 (39%), Positives = 55/81 (67%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERM 239
+++ L AC + A++QG IHG+A R G S++ VG+AL NMYA +++++ ++FERM
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383
Query: 240 PCNEGVSWSSVIATCGTSKFG 302
P V+W+++I+ G S+ G
Sbjct: 384 PKKNVVAWNAIIS--GYSQHG 402
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +3
Query: 66 LGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERMPC 245
L + ACGS ++ G +H G SD VG+AL++MY L+ +R+VF+RMP
Sbjct: 124 LSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPK 183
Query: 246 NEGVSWSSVIA 278
+ VSW+++IA
Sbjct: 184 RDVVSWNAIIA 194
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/72 (37%), Positives = 46/72 (63%)
Frame = +3
Query: 60 SVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERM 239
+++ + C + A++QG IH +A R GI SD V + L NMYA +++T+ ++FERM
Sbjct: 223 TLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM 282
Query: 240 PCNEGVSWSSVI 275
P + SW+++I
Sbjct: 283 PIRDVASWNAII 294
>ref|XP_004959800.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Setaria italica]
Length = 943
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +3
Query: 69 GALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDLDTSRRVFERMPCN 248
GA++ACG +GA+K G +HGH +LG S G+AL MYA + + VF MP
Sbjct: 576 GAIAACGELGALKHGKQLHGHLVQLGFEGSNSAGNALITMYAKCGAVKEAHLVFLVMPNV 635
Query: 249 EGVSWSSVIATCGTSKFGKDTL 314
+ VSW+++I+ G G++ L
Sbjct: 636 DSVSWNAMISALGQHGHGREAL 657
>gb|EMT12987.1| hypothetical protein F775_06874 [Aegilops tauschii]
Length = 680
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/95 (36%), Positives = 54/95 (56%)
Frame = +3
Query: 30 EEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDL 209
E+I+ +Y + GA++ACG +GA+K G +H H R G + S G+AL MY +
Sbjct: 298 EDIKPCDY--TYAGAVAACGELGALKHGMQLHAHIVRCGFEASNSAGNALLTMYGKCGAV 355
Query: 210 DTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTL 314
+R VF MP + VSW+++IA G G++ L
Sbjct: 356 KDARLVFLVMPNVDSVSWNAMIAALGQHGHGREAL 390
>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/97 (38%), Positives = 57/97 (58%)
Frame = +3
Query: 30 EEIEADEYVDSVLGALSACGSIGAVKQGASIHGHAFRLGIASDESVGSALSNMYADSNDL 209
E IE +++ + L+ACGSI A GA +HG R G ++ VGSAL +MY+ DL
Sbjct: 234 EGIECNQFTFPSI--LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDL 291
Query: 210 DTSRRVFERMPCNEGVSWSSVIATCGTSKFGKDTLAV 320
+RR+ E M ++ VSW+S+I C G++ L++
Sbjct: 292 SNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSL 328