BLASTX nr result
ID: Ephedra28_contig00028642
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00028642 (388 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002439333.1| hypothetical protein SORBIDRAFT_09g004530 [S... 57 3e-06 ref|XP_004977095.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-... 56 4e-06 ref|XP_004977094.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-... 56 4e-06 ref|XP_003566520.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-... 56 4e-06 >ref|XP_002439333.1| hypothetical protein SORBIDRAFT_09g004530 [Sorghum bicolor] gi|241944618|gb|EES17763.1| hypothetical protein SORBIDRAFT_09g004530 [Sorghum bicolor] Length = 1026 Score = 57.0 bits (136), Expect = 3e-06 Identities = 23/67 (34%), Positives = 39/67 (58%) Frame = +1 Query: 187 ILRSFWGFIKFCDANKSWPSKGPYGDFRFDDIGSDDPSWMVPMTIFCSLYSTFLKHVDYH 366 I+ + W FIK C+AN+ WP + + +D P W++PM++FC +Y LK +D Sbjct: 464 IVPALWNFIKRCNANRRWPFFSKFAS----SLPADVPGWLLPMSVFCPIYRHMLKIIDNG 519 Query: 367 SFYKAQE 387 FY+ ++ Sbjct: 520 EFYEQEK 526 >ref|XP_004977095.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X2 [Setaria italica] gi|514804447|ref|XP_004977096.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X3 [Setaria italica] Length = 782 Score = 56.2 bits (134), Expect = 4e-06 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = +1 Query: 187 ILRSFWGFIKFCDANKSWPSKGPYGDFRFDDIGSDDPSWMVPMTIFCSLYSTFLKHVDYH 366 I+ + W FIK C N++WP + + +D P W++PM++FC +Y LK +D Sbjct: 220 IVPALWNFIKRCHENRTWPCFSKFAS----SLPADAPGWLLPMSVFCPIYKHMLKIIDNG 275 Query: 367 SFYKAQE 387 FY+ ++ Sbjct: 276 EFYEQEK 282 >ref|XP_004977094.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X1 [Setaria italica] Length = 1027 Score = 56.2 bits (134), Expect = 4e-06 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = +1 Query: 187 ILRSFWGFIKFCDANKSWPSKGPYGDFRFDDIGSDDPSWMVPMTIFCSLYSTFLKHVDYH 366 I+ + W FIK C N++WP + + +D P W++PM++FC +Y LK +D Sbjct: 465 IVPALWNFIKRCHENRTWPCFSKFAS----SLPADAPGWLLPMSVFCPIYKHMLKIIDNG 520 Query: 367 SFYKAQE 387 FY+ ++ Sbjct: 521 EFYEQEK 527 >ref|XP_003566520.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Brachypodium distachyon] Length = 999 Score = 56.2 bits (134), Expect = 4e-06 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = +1 Query: 187 ILRSFWGFIKFCDANKSWPSKGPYGDFRFDDIGSDDPSWMVPMTIFCSLYSTFLKHVDYH 366 I+ + W FIK C N+ WP Y + +D P W++P+++FC +Y LK VD Sbjct: 434 IVPALWNFIKRCHENQRWPYFSKY----ISPLPADAPGWLLPVSVFCPIYRYMLKIVDNE 489 Query: 367 SFYKAQE 387 FY+ Q+ Sbjct: 490 EFYEQQK 496