BLASTX nr result
ID: Ephedra28_contig00028602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028602
(389 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850874.1| hypothetical protein AMTR_s00025p00149970 [A... 157 1e-36
ref|XP_002973996.1| hypothetical protein SELMODRAFT_414166 [Sela... 142 6e-32
ref|XP_002983499.1| hypothetical protein SELMODRAFT_422836 [Sela... 142 6e-32
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 131 8e-29
ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|35548412... 130 2e-28
ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca... 126 3e-27
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus] 124 1e-26
gb|EMJ27982.1| hypothetical protein PRUPE_ppa018049mg, partial [... 124 2e-26
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 121 1e-25
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 121 1e-25
gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus... 120 2e-25
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 119 3e-25
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 119 3e-25
emb|CAN60030.1| hypothetical protein VITISV_000373 [Vitis vinifera] 119 3e-25
ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis] g... 119 5e-25
gb|EOY32048.1| DNA ligase IV [Theobroma cacao] 117 1e-24
gb|EXC31207.1| DNA ligase 4 [Morus notabilis] 117 2e-24
ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 116 3e-24
dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana] 114 1e-23
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554... 114 1e-23
>ref|XP_006850874.1| hypothetical protein AMTR_s00025p00149970 [Amborella trichopoda]
gi|548854545|gb|ERN12455.1| hypothetical protein
AMTR_s00025p00149970 [Amborella trichopoda]
Length = 1120
Score = 157 bits (397), Expect = 1e-36
Identities = 76/113 (67%), Positives = 91/113 (80%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
MSD TV FSVLC M +A+ R+K + MKRKH RTFLDHVY KEYFSA+RL+LP LDRER
Sbjct: 1 MSDETVKFSVLCSMFQALARNKSSVMKRKHFRTFLDHVYKSKEYFSAIRLILPSLDRERG 60
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
Y LKE+ LA L DAL +S++S DA RL+NWRKGGAKTG +AGNF+LVA++V
Sbjct: 61 TYGLKESVLATCLIDALGISRESEDALRLINWRKGGAKTGPNAGNFALVAAEV 113
>ref|XP_002973996.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
gi|300158328|gb|EFJ24951.1| hypothetical protein
SELMODRAFT_414166 [Selaginella moellendorffii]
Length = 1171
Score = 142 bits (357), Expect = 6e-32
Identities = 68/113 (60%), Positives = 87/113 (76%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
M + TV FS + +MLE I +SKK +KRK RTFLDH YTD+EYFS MRL+LP+LDRER
Sbjct: 1 MGENTVRFSAVSDMLERISKSKKLPVKRKTFRTFLDHFYTDREYFSVMRLVLPELDRERG 60
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
Y LKE+ LA+ L DAL L+K S DA +L+NWRKGG+ G +AGNF+LVA+++
Sbjct: 61 NYGLKESVLAKCLADALGLAKGSSDADKLVNWRKGGSSVGKNAGNFALVAAEI 113
>ref|XP_002983499.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
gi|300148742|gb|EFJ15400.1| hypothetical protein
SELMODRAFT_422836 [Selaginella moellendorffii]
Length = 1172
Score = 142 bits (357), Expect = 6e-32
Identities = 68/113 (60%), Positives = 87/113 (76%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
M + TV FS + +MLE I +SKK +KRK RTFLDH YTD+EYFS MRL+LP+LDRER
Sbjct: 1 MGENTVRFSAVSDMLERISKSKKLPVKRKTFRTFLDHFYTDREYFSVMRLVLPELDRERG 60
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
Y LKE+ LA+ L DAL L+K S DA +L+NWRKGG+ G +AGNF+LVA+++
Sbjct: 61 NYGLKESVLAKCLADALGLAKGSSDADKLVNWRKGGSSVGKNAGNFALVAAEI 113
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 131 bits (330), Expect = 8e-29
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = -1
Query: 320 FSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEA 141
FSVLC +L R+K KR R FLD TD+ YF A+RL+LP LDRER +Y LKE+
Sbjct: 7 FSVLCSLLTWTQRTKSPAKKRAKFRKFLDSFCTDRNYFPAIRLILPNLDRERGSYGLKES 66
Query: 140 QLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA +L DAL LSKDSHDA RL+NWRKGG+KTG +AGNF+LVAS+V
Sbjct: 67 VLATSLIDALGLSKDSHDALRLVNWRKGGSKTGVNAGNFALVASEV 112
>ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|355484124|gb|AES65327.1| DNA
ligase [Medicago truncatula]
Length = 1244
Score = 130 bits (326), Expect = 2e-28
Identities = 64/106 (60%), Positives = 80/106 (75%)
Frame = -1
Query: 320 FSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEA 141
FSVLC + R+K KR R FLD+ TD+ YF A+RL+LP LDRER +Y LKE+
Sbjct: 7 FSVLCSLFTWTQRTKAPAKKRAKFRKFLDNFCTDRNYFPAIRLILPNLDRERGSYGLKES 66
Query: 140 QLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA +L DAL ++KDSHDA RL+NWRKGGAKTGA+AGNF+LVA++V
Sbjct: 67 VLATSLIDALGMAKDSHDALRLVNWRKGGAKTGANAGNFALVAAEV 112
>ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca subsp. vesca]
Length = 1188
Score = 126 bits (317), Expect = 3e-27
Identities = 62/106 (58%), Positives = 80/106 (75%)
Frame = -1
Query: 320 FSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEA 141
FSVLC + I RSK + +KR R FLD+ +YF+A+RL+LP LDRER +Y LKE+
Sbjct: 10 FSVLCSLFNWIQRSKTSALKRSKFRKFLDNFCKPSDYFAAIRLVLPNLDRERGSYGLKES 69
Query: 140 QLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA L DAL +S+DS DA RL+NWRKGGA+TGA+AGNF+LVA++V
Sbjct: 70 VLATCLIDALGMSRDSDDALRLINWRKGGARTGANAGNFALVAAEV 115
>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
Length = 1214
Score = 124 bits (311), Expect = 1e-26
Identities = 62/108 (57%), Positives = 78/108 (72%)
Frame = -1
Query: 326 VSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLK 147
+ F+VL + + I RSK + KR R FLD + YFSA+RL+LP LDRER Y LK
Sbjct: 5 IKFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSHYFSAIRLILPSLDRERGTYGLK 64
Query: 146 EAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
E+ LA L DAL +S+DS DA RL+NWRKGGAKTGA+AGNF+LVA++V
Sbjct: 65 ESVLATCLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVAAEV 112
>gb|EMJ27982.1| hypothetical protein PRUPE_ppa018049mg, partial [Prunus persica]
Length = 539
Score = 124 bits (310), Expect = 2e-26
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
MS+ T FSVLC + + RSK + +KR R FLD +YF ++RL+LP LDRER
Sbjct: 1 MSEET-KFSVLCSLFNWMQRSKTSTLKRSKFRKFLDTFCKPADYFDSIRLILPSLDRERG 59
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
+Y LKE+ LA L DAL +++DS DA RL+NWRKGGAKTG +AGNFSLVA++V
Sbjct: 60 SYGLKESVLATCLIDALGMARDSEDALRLINWRKGGAKTGVNAGNFSLVAAEV 112
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 121 bits (303), Expect = 1e-25
Identities = 64/105 (60%), Positives = 74/105 (70%)
Frame = -1
Query: 317 SVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEAQ 138
SVLC + RSK A KR R FLD TD +F A+RLLLP LDRER +Y LKE+
Sbjct: 8 SVLCSLFTWTQRSKSAAKKRAKFRKFLDAFCTDHNFFPAVRLLLPNLDRERGSYGLKESV 67
Query: 137 LARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA +L DAL +S+DS DA RLLNWRKGGA TG AGNF+LVAS+V
Sbjct: 68 LATSLIDALGISRDSPDALRLLNWRKGGAATGPTAGNFALVASEV 112
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 121 bits (303), Expect = 1e-25
Identities = 64/105 (60%), Positives = 74/105 (70%)
Frame = -1
Query: 317 SVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEAQ 138
SVLC + RSK A KR R FLD TD +F A+RLLLP LDRER +Y LKE+
Sbjct: 8 SVLCSLFTWTQRSKSAAKKRAKFRKFLDAFCTDHNFFPAVRLLLPNLDRERGSYGLKESV 67
Query: 137 LARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA +L DAL +S+DS DA RLLNWRKGGA TG AGNF+LVAS+V
Sbjct: 68 LATSLIDALGISRDSPDALRLLNWRKGGAATGPTAGNFALVASEV 112
>gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus vulgaris]
Length = 1172
Score = 120 bits (301), Expect = 2e-25
Identities = 62/113 (54%), Positives = 78/113 (69%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
M+ FSVLC + R+K A KR R FLD D+ +F A+RL+LP LDRER
Sbjct: 1 MATEQTKFSVLCSLFTWTQRTKSAPRKRFKFRKFLDAFCIDRNFFPAIRLILPNLDRERG 60
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
+Y LKE+ LA +L DAL +S+DS DA RL+NWRKGGA TGA AGNF+LVA++V
Sbjct: 61 SYGLKESVLATSLIDALGISRDSPDALRLVNWRKGGAATGATAGNFALVAAEV 113
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 119 bits (299), Expect = 3e-25
Identities = 60/106 (56%), Positives = 77/106 (72%)
Frame = -1
Query: 320 FSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEA 141
FSVLC + I RS+ + KR R FLD + FSA+RL+LP LDRER +Y LKE+
Sbjct: 7 FSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGSYGLKES 66
Query: 140 QLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA L DAL +S++S DA RL+NWRKGGAKTGA+AGNF++VA++V
Sbjct: 67 VLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEV 112
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 119 bits (299), Expect = 3e-25
Identities = 60/106 (56%), Positives = 77/106 (72%)
Frame = -1
Query: 320 FSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEA 141
FSVLC + I RS+ + KR R FLD + FSA+RL+LP LDRER +Y LKE+
Sbjct: 7 FSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGSYGLKES 66
Query: 140 QLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA L DAL +S++S DA RL+NWRKGGAKTGA+AGNF++VA++V
Sbjct: 67 VLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEV 112
>emb|CAN60030.1| hypothetical protein VITISV_000373 [Vitis vinifera]
Length = 304
Score = 119 bits (299), Expect = 3e-25
Identities = 60/106 (56%), Positives = 77/106 (72%)
Frame = -1
Query: 320 FSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLKEA 141
FSVLC + I RS+ + KR R FLD + FSA+RL+LP LDRER +Y LKE+
Sbjct: 7 FSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGSYGLKES 66
Query: 140 QLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
LA L DAL +S++S DA RL+NWRKGGAKTGA+AGNF++VA++V
Sbjct: 67 VLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEV 112
>ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
gi|223532899|gb|EEF34668.1| DNA ligase IV, putative
[Ricinus communis]
Length = 850
Score = 119 bits (297), Expect = 5e-25
Identities = 62/113 (54%), Positives = 77/113 (68%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
MS FSV+ + E I +SK + KR R FLD +YFSA+RL+LP LDRER
Sbjct: 1 MSGNETKFSVMVSLFEWIQKSKYSAKKRSKFRKFLDTFCKPDDYFSAIRLILPSLDRERG 60
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
+Y LKE+ LA L DALA+S+DS DA RL NWRKGG KTG++AG+F LVA +V
Sbjct: 61 SYGLKESVLATCLVDALAMSRDSPDAVRLFNWRKGGPKTGSNAGHFPLVAFEV 113
>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
Length = 1195
Score = 117 bits (294), Expect = 1e-24
Identities = 60/108 (55%), Positives = 75/108 (69%)
Frame = -1
Query: 326 VSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLK 147
+ SV+ + I +SK + KR R FLD +YFSAMRL+LP LDRER Y LK
Sbjct: 5 IKLSVVVSLFSWIQKSKTSAKKRSKFRKFLDTFCKPSDYFSAMRLILPSLDRERGTYGLK 64
Query: 146 EAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
E+ LA L DAL +S+DS DA RL+NWRKGGA TGA+AGNF+LVA++V
Sbjct: 65 ESVLAICLIDALGMSRDSPDALRLINWRKGGANTGANAGNFALVAAEV 112
>gb|EXC31207.1| DNA ligase 4 [Morus notabilis]
Length = 627
Score = 117 bits (293), Expect = 2e-24
Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Frame = -1
Query: 341 MSDTTVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERR 162
M+ SVLC + ++RSK A KR R FLD + +YF A+RLLLP LDRER
Sbjct: 1 MATEETKISVLCSLFNWMLRSKPAAKKRSKFRKFLDTFCKNGDYFPAIRLLLPNLDRERG 60
Query: 161 AYKLKEAQLARALTDALALSKDSHDAQRLLNWRKGG-AKTGAHAGNFSLVA 12
+Y LKE+ LA +L DAL +S+DS DA RL+NWRKGG AK GA+AGNF+LVA
Sbjct: 61 SYGLKESVLATSLIDALGISRDSEDALRLINWRKGGAAKAGAYAGNFALVA 111
>ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like
[Brachypodium distachyon]
Length = 1249
Score = 116 bits (291), Expect = 3e-24
Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
Frame = -1
Query: 329 TVSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDK---EYFSAMRLLLPQLDRERRA 159
TV F +L M +A+ R + + KR +R FLD Y +YFSA+RL+LP LDRER +
Sbjct: 4 TVRFGLLVAMFQAMSRDRTSAKKRGRLRAFLDRAYGAPGRDDYFSALRLVLPSLDRERGS 63
Query: 158 YKLKEAQLARALTDALALSKDSHDAQRLLNWRKGGAKTGAHAGNFSLVASQV 3
Y LKEA LA AL DAL ++KDS DA RL NWR+GG +G +AGNFSLVA++V
Sbjct: 64 YGLKEAALAAALVDALGIAKDSPDAVRLTNWRRGGGGSGRNAGNFSLVAAEV 115
>dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
Length = 1184
Score = 114 bits (285), Expect = 1e-23
Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = -1
Query: 326 VSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLK 147
+ FSVL + I +SK + KR R FLD +YF A+RL++P LDRER +Y LK
Sbjct: 5 IKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSYGLK 64
Query: 146 EAQLARALTDALALSKDSHDAQRLLNWRKGG-AKTGAHAGNFSLVASQV 3
E+ LA L DAL +S+D+ DA RLLNWRKGG AK GA+AGNFSL+A++V
Sbjct: 65 ESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEV 113
>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
[Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
ligase 4 [Arabidopsis thaliana]
Length = 1219
Score = 114 bits (285), Expect = 1e-23
Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = -1
Query: 326 VSFSVLCEMLEAIMRSKKAQMKRKHIRTFLDHVYTDKEYFSAMRLLLPQLDRERRAYKLK 147
+ FSVL + I +SK + KR R FLD +YF A+RL++P LDRER +Y LK
Sbjct: 5 IKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSYGLK 64
Query: 146 EAQLARALTDALALSKDSHDAQRLLNWRKGG-AKTGAHAGNFSLVASQV 3
E+ LA L DAL +S+D+ DA RLLNWRKGG AK GA+AGNFSL+A++V
Sbjct: 65 ESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEV 113