BLASTX nr result
ID: Ephedra28_contig00028597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028597
(881 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21655.3| unnamed protein product [Vitis vinifera] 166 8e-39
ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog ... 159 1e-36
ref|XP_006590830.1| PREDICTED: DNA repair protein XRCC2 homolog ... 158 2e-36
ref|XP_006592059.1| PREDICTED: DNA repair protein XRCC2 homolog ... 156 8e-36
gb|EOY01429.1| X-ray repair cross complementing 2 (XRCC2), putat... 155 2e-35
gb|ESW03671.1| hypothetical protein PHAVU_011G032400g [Phaseolus... 149 1e-33
ref|XP_002456705.1| hypothetical protein SORBIDRAFT_03g041130 [S... 147 7e-33
ref|NP_001169396.1| uncharacterized protein LOC100383265 [Zea ma... 147 7e-33
ref|XP_006646514.1| PREDICTED: DNA repair protein XRCC2 homolog ... 145 2e-32
gb|EMJ27351.1| hypothetical protein PRUPE_ppa014924mg, partial [... 144 3e-32
ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog ... 144 3e-32
ref|XP_004970726.1| PREDICTED: DNA repair protein XRCC2 homolog ... 144 4e-32
ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog ... 144 6e-32
ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog ... 143 1e-31
ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ... 142 1e-31
ref|XP_006847000.1| hypothetical protein AMTR_s00017p00136420 [A... 139 1e-30
ref|XP_006394144.1| hypothetical protein EUTSA_v10005594mg [Eutr... 138 2e-30
tpg|DAA56621.1| TPA: hypothetical protein ZEAMMB73_585387 [Zea m... 138 2e-30
ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidop... 135 2e-29
ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop... 135 2e-29
>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 166 bits (421), Expect = 8e-39
Identities = 91/204 (44%), Positives = 127/204 (62%), Gaps = 9/204 (4%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L +CM RFLY+RCY S E LA LKT+ ++Q+ + HG LMIDSIGAFYW+DRA
Sbjct: 122 ELFAACMRRFLYIRCYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRA 181
Query: 183 YRSNNTE-EKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
S + E RK+LS Q I E VV+E+ +L +HP+LVL TK +I + Y ST +VKR
Sbjct: 182 STSLHLESNSRKRLSLQSISETVVEEIRKLLLVHPMLVLATKATILGDTY-STNEVKRTS 240
Query: 360 SESSHDSVQNL-------PRAQYREYMPAVWQTFVTHRLFLEKSEETNVNGN-RKLPIFT 515
+ S + NL + YRE+MP VWQ+FVTHR+ + +++ N + IF
Sbjct: 241 MKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFL 300
Query: 516 STWDAPALRFVEKFIVQDDGLSLI 587
S W P+L F +KFIV+D G+ ++
Sbjct: 301 SEWLMPSLNFSDKFIVRDAGVFVV 324
>ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Solanum
tuberosum] gi|565400189|ref|XP_006365614.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X2 [Solanum
tuberosum]
Length = 338
Score = 159 bits (402), Expect = 1e-36
Identities = 88/203 (43%), Positives = 128/203 (63%), Gaps = 8/203 (3%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L M RF Y+RCY S E LA LKT+ Q+QKE + HG GV LLMIDSIGAFYW+DRA
Sbjct: 139 ELFAVSMRRFSYIRCYDSFEFLATLKTLHFQLQKEKEAHGSGVYLLMIDSIGAFYWMDRA 198
Query: 183 YRS-NNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
S R+ LS Q + + VQE+ IL +HP+LVL TK + + D ++R+V R
Sbjct: 199 SPSIPPGSNNRRSLSLQSVSDIAVQEIQKILVVHPMLVLTTK-AASLQDKFTSREVIRST 257
Query: 360 SESSHDS------VQNLPRAQ-YREYMPAVWQTFVTHRLFLEKSEETNVNGNRKLPIFTS 518
+ S +S +++ AQ YREYMP+VWQ+FV+HR+ + +S+++ +K PI+ S
Sbjct: 258 GQLSDESNLDSRTIRSSTNAQLYREYMPSVWQSFVSHRILVRRSDDSKY---QKKPIYLS 314
Query: 519 TWDAPALRFVEKFIVQDDGLSLI 587
W P+L+ +KF + +DG ++
Sbjct: 315 EWLLPSLKLSDKFTINEDGAYIV 337
>ref|XP_006590830.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Glycine
max] gi|571488077|ref|XP_006590831.1| PREDICTED: DNA
repair protein XRCC2 homolog isoform X3 [Glycine max]
gi|571488079|ref|XP_006590832.1| PREDICTED: DNA repair
protein XRCC2 homolog isoform X4 [Glycine max]
Length = 312
Score = 158 bits (400), Expect = 2e-36
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Frame = +3
Query: 18 CMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAYR-SN 194
CM RFLY+RCY S E L L+T+ +++KE + HG GV LLMIDSIGAF+W+DRA +
Sbjct: 118 CMARFLYVRCYDSFEFLHTLRTLHCRLEKEKEVHGVGVHLLMIDSIGAFHWMDRASMFLS 177
Query: 195 NTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDY-LSTRDVKRVCSES- 368
E +KKL Q + EAVVQ + +LQ+HP+L++ TK + N Y ++ DVK E
Sbjct: 178 QRENSKKKLFLQTMSEAVVQNIRKLLQVHPMLIIATKSVVFGNRYSTASNDVKVNMEEGC 237
Query: 369 SHDSVQNLPRAQYREYMPAVWQTFVTHRLFLEKSEETNVNGN-RKLPIFTSTWDAPALRF 545
S + +N QYREYMP+VWQ+FVTHR+ + S+E V N + + W P L F
Sbjct: 238 SKNVARNHQNFQYREYMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSF 297
Query: 546 VEKFIVQDDGL 578
+K +V+D G+
Sbjct: 298 PDKIVVKDAGV 308
>ref|XP_006592059.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Glycine
max]
Length = 310
Score = 156 bits (395), Expect = 8e-36
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Frame = +3
Query: 18 CMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAYR-SN 194
CM RFLY+RCY S E L L+T+ +++KE + HG GV LLMIDSIGAF+W+DRA +
Sbjct: 116 CMARFLYVRCYDSFEFLHTLRTLHCRLEKEKEVHGVGVHLLMIDSIGAFHWMDRASMFLS 175
Query: 195 NTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDY-LSTRDVKRVCSE-S 368
E ++KKL Q + EAVVQ + +LQ+HP+L++ TK I N Y ++ +VK E
Sbjct: 176 QRENRKKKLFLQTVSEAVVQNIKKLLQVHPMLIIATKSVIFGNRYSTASNEVKGNMEERC 235
Query: 369 SHDSVQNLPRAQYREYMPAVWQTFVTHRLFLEKSEETNV-NGNRKLPIFTSTWDAPALRF 545
S + +N YREYMP+VWQ+FVTHR+ + S+E V N+ + W P L F
Sbjct: 236 SKNVTRNHQNYLYREYMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSF 295
Query: 546 VEKFIVQDDGL 578
+K +V+D G+
Sbjct: 296 PDKIVVKDAGV 306
>gb|EOY01429.1| X-ray repair cross complementing 2 (XRCC2), putative [Theobroma
cacao]
Length = 340
Score = 155 bits (392), Expect = 2e-35
Identities = 84/203 (41%), Positives = 122/203 (60%), Gaps = 8/203 (3%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L CM RFLY+RCY S E LA LKT+ ++QKE + HG V L+IDSIGAF+W+DR
Sbjct: 137 ELFALCMRRFLYIRCYDSSEFLATLKTLHYRLQKEKEAHGINVHFLLIDSIGAFHWVDRG 196
Query: 183 YRSNNTE-EKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDY------LSTR 341
S + + RK L Q + E VV+E+ +L +HP+LV+ TK +I N Y + R
Sbjct: 197 SSSFSLDGNNRKSLHLQSVSETVVREIRKLLLVHPMLVMATKAAILGNRYSMNESRWNNR 256
Query: 342 DVKRVCSESSHDSVQNLPRAQYREYMPAVWQTFVTHRLFLEKSEETNVNG-NRKLPIFTS 518
+ S + + YREYMPAVWQ+FVTHR+ ++ ++ VNG +R + I+ S
Sbjct: 257 KWPSTDNPHSRSVTSSDQQVPYREYMPAVWQSFVTHRILVQATDNDFVNGEHRNVSIYLS 316
Query: 519 TWDAPALRFVEKFIVQDDGLSLI 587
W P L ++KF+V D G+ ++
Sbjct: 317 EWLLPPLNSLDKFVVGDTGVFIL 339
>gb|ESW03671.1| hypothetical protein PHAVU_011G032400g [Phaseolus vulgaris]
Length = 317
Score = 149 bits (376), Expect = 1e-33
Identities = 80/191 (41%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Frame = +3
Query: 18 CMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAYR-SN 194
CM RFLY+RCY S E L L+T+ +++KE + G GV LLMIDSIGAF+W+DRA +
Sbjct: 123 CMARFLYVRCYDSFEFLHTLRTLHCRLEKEKEVQGVGVHLLMIDSIGAFHWMDRASMFLS 182
Query: 195 NTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDY-LSTRDVK-RVCSES 368
E +KKL Q + EAVVQ + +LQ++P+L++ TK I + + ++ ++K V
Sbjct: 183 QRENSKKKLFLQTVSEAVVQNIRKLLQVYPMLIMATKSVIFGSRHSTASNEIKGNVEERC 242
Query: 369 SHDSVQNLPRAQYREYMPAVWQTFVTHRLFLEKSEE-TNVNGNRKLPIFTSTWDAPALRF 545
S + +N Q+REYMP+VWQ+FVTHR+ L S+E ++ I++ W P L F
Sbjct: 243 SKNMTRNHKNFQHREYMPSVWQSFVTHRILLHSSDEHPGTTNHQNSSIYSLEWLLPRLSF 302
Query: 546 VEKFIVQDDGL 578
+K +V+D G+
Sbjct: 303 PDKIVVKDAGV 313
>ref|XP_002456705.1| hypothetical protein SORBIDRAFT_03g041130 [Sorghum bicolor]
gi|241928680|gb|EES01825.1| hypothetical protein
SORBIDRAFT_03g041130 [Sorghum bicolor]
Length = 343
Score = 147 bits (370), Expect = 7e-33
Identities = 87/204 (42%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L CM+RFLY RC +S E +AALKT+ Q Q + G G+ +MIDSIGAFYW+DR
Sbjct: 144 LFSDCMQRFLYARCCNSPEFIAALKTV--QSQSRREVSGAGIYFVMIDSIGAFYWIDRG- 200
Query: 186 RSNNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVCSE 365
+ + K + Q I E+VV EL +LQL P LVLVTK I + D RV S+
Sbjct: 201 --SQPARENKGRTLQSITESVVHELRKLLQLQPALVLVTKAPIYGEGTTTANDFNRVSSK 258
Query: 366 SSHDSVQNLPRAQY--------REYMPAVWQTFVTHRLFL--EKSEETNVNGNRKLPIFT 515
L ++ REYMP++WQ+F+THR+ L E++E +V + LP+ T
Sbjct: 259 YMLGDSTGLGYSRQGEEKTVSNREYMPSIWQSFITHRINLQVEEAEVPSVLESEVLPMHT 318
Query: 516 STWDAPALRFVEKFIVQDDGLSLI 587
S W P L+ EKF + DDG+SLI
Sbjct: 319 SEWVQPCLKMKEKFSIMDDGVSLI 342
>ref|NP_001169396.1| uncharacterized protein LOC100383265 [Zea mays]
gi|224029093|gb|ACN33622.1| unknown [Zea mays]
gi|414879491|tpg|DAA56622.1| TPA: hypothetical protein
ZEAMMB73_585387 [Zea mays]
Length = 340
Score = 147 bits (370), Expect = 7e-33
Identities = 91/205 (44%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L CM+RFLY RC S E + ALKT+ Q Q + G G+ +MIDSIGAFYW+DR
Sbjct: 142 LFSDCMQRFLYARCCKSPEFIDALKTV--QSQSRREVSGAGIYFVMIDSIGAFYWIDRGS 199
Query: 186 RSNNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSI------TANDYLSTRDV 347
+++ E K K L Q I+E+VV EL ILQL P LVLVTK S+ TAND+ RD
Sbjct: 200 QASR-ENKGKTL--QSIFESVVHELRKILQLEPALVLVTKASVYGEGTTTANDF--NRDS 254
Query: 348 KRVCSES----SHDSVQNLPRAQYREYMPAVWQTFVTHRLFLE-KSEETNVNGNRKLPIF 512
+ E + + REYMP++WQ+FVTHR+ L+ ++E +V + LP+
Sbjct: 255 SKYMLEDPSGLGYSRREEERTLSNREYMPSIWQSFVTHRINLQVEAEVPSVLESEVLPLH 314
Query: 513 TSTWDAPALRFVEKFIVQDDGLSLI 587
TS W P L+ EKF + DDG++LI
Sbjct: 315 TSEWVQPCLKMKEKFSIMDDGVNLI 339
>ref|XP_006646514.1| PREDICTED: DNA repair protein XRCC2 homolog [Oryza brachyantha]
Length = 343
Score = 145 bits (366), Expect = 2e-32
Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 11/205 (5%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L CM+RFLY RCY+S + +AAL+ + Q Q +++ G G+ LMIDSIG+FYW+DR
Sbjct: 139 LFSDCMKRFLYARCYNSSDFIAALQNMHSQSQAKSEVLGVGIYFLMIDSIGSFYWMDRDS 198
Query: 186 RSNNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVCS- 362
+ TE K + LS Q + E VVQ+L QL P+L++VTK I + + D +R S
Sbjct: 199 QP-ITESKGRTLSRQSMTEMVVQKLRRFFQLQPVLLMVTKAPIYGEGFTTGNDFQRGTSK 257
Query: 363 ESSHDSV------QNLPRAQYREYMPAVWQTFVTHRLFL----EKSEETNVNGNRKLPIF 512
++S DS + RE+MP+VWQ+FVTHR+ L +++E + GN++LP+
Sbjct: 258 QTSEDSTIRCTGPEEEKNISCREFMPSVWQSFVTHRIKLQDLGQEAELFSGPGNKELPLH 317
Query: 513 TSTWDAPALRFVEKFIVQDDGLSLI 587
TS W P+L ++F + DDG+ LI
Sbjct: 318 TSEWVQPSLNTKDRFSITDDGVILI 342
>gb|EMJ27351.1| hypothetical protein PRUPE_ppa014924mg, partial [Prunus persica]
Length = 309
Score = 144 bits (364), Expect = 3e-32
Identities = 82/195 (42%), Positives = 120/195 (61%), Gaps = 6/195 (3%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L CM RFLY+RCY SLE LA LKT+ ++QKE + H G+ LLMIDSIG F+W+DR
Sbjct: 116 ELYALCMRRFLYVRCYDSLEFLATLKTLHYRLQKEKEVHHVGIQLLMIDSIGPFHWVDRG 175
Query: 183 YRSNNT-EEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
KRK LS Q +++AVVQ++ +L +HP+LV+ TK I N Y +VK+
Sbjct: 176 STFFPLGGNKRKCLSLQSVFDAVVQDIKKLLLVHPMLVMATKEIILGNAY-GGDEVKQNK 234
Query: 360 SESSHDSVQNL----PRAQYREYMPAVWQTFVTHRLFLEKSEE-TNVNGNRKLPIFTSTW 524
S ++NL + YREYMP+VWQ+FVTH++ + S++ + + ++ S W
Sbjct: 235 SLLDASGLRNLASNTQQLPYREYMPSVWQSFVTHKILVRASDDHMPIRHYEEHSVYLSEW 294
Query: 525 DAPALRFVEKFIVQD 569
P++ F +KF V+D
Sbjct: 295 LLPSISFRDKFTVKD 309
>ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog [Brachypodium
distachyon]
Length = 335
Score = 144 bits (364), Expect = 3e-32
Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 13/207 (6%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L CM+RF Y+RCYSS EL+ LKT+ Q K + G G+ LM+DSIGAFYW+DR
Sbjct: 134 LFTDCMKRFFYVRCYSSSELIVVLKTVYSQ-SKARRALGVGIYFLMLDSIGAFYWIDRCS 192
Query: 186 RSNNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSI------TANDYLSTRDV 347
+ + K K S Q I E+VVQE+ LQL P+LVLV+K I T+ND+ R
Sbjct: 193 QPTR-DSKGKTQSLQSITESVVQEIRKFLQLQPILVLVSKAHIYGEGITTSNDF--QRGT 249
Query: 348 KRVCSESS----HDSVQNLPRAQYREYMPAVWQTFVTHRLFLEKSEETNVNGNRK---LP 506
+ +E S + + REYMP+VWQTFVTHR+ L+ EE+ ++ ++ L
Sbjct: 250 SKFLTEDSTVLRYSKREEEINTSCREYMPSVWQTFVTHRIKLQ--EESGISSEQESEVLS 307
Query: 507 IFTSTWDAPALRFVEKFIVQDDGLSLI 587
I TS W P+L EKF ++D G+ +I
Sbjct: 308 IHTSEWVRPSLNIKEKFYIRDSGVVVI 334
>ref|XP_004970726.1| PREDICTED: DNA repair protein XRCC2 homolog [Setaria italica]
Length = 338
Score = 144 bits (363), Expect = 4e-32
Identities = 91/203 (44%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L CM+ FLY+RCY+S E AALKT+ Q Q ++ G G+ +MIDSIGAFYW+DRA
Sbjct: 140 LFSDCMQHFLYVRCYNSSEFTAALKTV--QSQSRSEVLGVGIYFVMIDSIGAFYWIDRA- 196
Query: 186 RSNNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVCSE 365
S E + K S Q + E VV E+ LQL P LVLVTK I A + D R S+
Sbjct: 197 -SQPVRESKGK-SLQSVTETVVHEIRTFLQLQPALVLVTKAPIYAEGTTTANDFNRGSSK 254
Query: 366 SSHD-------SVQNLPRA-QYREYMPAVWQTFVTHRLFL-EKSEETNVNGNRKLPIFTS 518
+ + S Q R YREYMP++WQ+FVTHR+ L E++E +V N TS
Sbjct: 255 YTLEDSTVLRYSRQEEERTLSYREYMPSIWQSFVTHRINLQEEAEVPSVQENGVHSTHTS 314
Query: 519 TWDAPALRFVEKFIVQDDGLSLI 587
W P+L+ EKF + DDG+ LI
Sbjct: 315 EWVQPSLKTKEKFSIVDDGVILI 337
>ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cicer
arietinum] gi|502144799|ref|XP_004505754.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X2 [Cicer
arietinum] gi|502144801|ref|XP_004505755.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X3 [Cicer
arietinum]
Length = 328
Score = 144 bits (362), Expect = 6e-32
Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 9/196 (4%)
Frame = +3
Query: 18 CMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAYRSNN 197
CM RFLY+RC S + L LKT+ ++ KE + HG V LLMIDSIG F+W+DRA +
Sbjct: 129 CMTRFLYVRCSDSFQFLQTLKTLNWRLDKEKEVHGVSVHLLMIDSIGTFHWMDRASMFLS 188
Query: 198 TEE-KRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTR-DVKRVCSESS 371
+E RKKL Q + EAVVQ++ +LQ+HP+LV+ TK I N + S +VK +++
Sbjct: 189 LKENNRKKLFLQSVSEAVVQDIKKLLQVHPMLVIATKSVIFWNKHSSASIEVKGSFMKNN 248
Query: 372 HD--SVQNLPR----AQYREYMPAVWQTFVTHRLFLEKSEETNVNGN-RKLPIFTSTWDA 530
+ S++N+ R QYREYMP+VWQ+FVTHR+ + S++ + N + F W
Sbjct: 249 WEERSLRNVTRNYQHFQYREYMPSVWQSFVTHRILIRSSDDHSATSNCQNSSFFLLEWLL 308
Query: 531 PALRFVEKFIVQDDGL 578
P L F + +V+D G+
Sbjct: 309 PKLSFSDTIVVKDAGV 324
>ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog [Fragaria vesca subsp.
vesca]
Length = 316
Score = 143 bits (360), Expect = 1e-31
Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 5/200 (2%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L +CM RFLY+RCY SLE LA LKT+ ++++E K H + LLMIDSIG F W+DR
Sbjct: 116 ELYAACMSRFLYVRCYDSLEFLATLKTLHHRLKREKKMHNLNMQLLMIDSIGPFQWVDRG 175
Query: 183 YRSNNT-EEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDY--LSTRDVKR 353
RK LS Q I E VVQE+ +L LHPL+V+ TK + N Y +
Sbjct: 176 STFFPLGSHNRKCLSLQSISETVVQEIKKLLLLHPLIVIATKEIVLDNVYGMDEAKQNNY 235
Query: 354 VCSESSHDSV-QNLPRAQYREYMPAVWQTFVTHRLFLEKSEE-TNVNGNRKLPIFTSTWD 527
+ ES S+ + R YRE+MP +WQ+F+TH++ + S++ + +++ ++ S W
Sbjct: 236 MLEESGGRSITSSTQRLPYREFMPPIWQSFITHKILVRASDDLLPIRLDQEHSLYFSEWL 295
Query: 528 APALRFVEKFIVQDDGLSLI 587
P+L F +KF+V+D G+ ++
Sbjct: 296 LPSLSFQDKFVVKDAGIFIV 315
>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
Length = 315
Score = 142 bits (359), Expect = 1e-31
Identities = 77/161 (47%), Positives = 103/161 (63%), Gaps = 8/161 (4%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L +CM RFLY+RCY S E LA LKT+ ++Q+ + HG LMIDSIGAFYW+DRA
Sbjct: 137 ELFAACMRRFLYIRCYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRA 196
Query: 183 YRSNNTE-EKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
S + E RK+LS Q I E VV+E+ +L +HP+LVL TK +I + Y ST +VKR
Sbjct: 197 STSLHLESNSRKRLSLQSISETVVEEIRKLLLVHPMLVLATKATILGDTY-STNEVKRTS 255
Query: 360 SESSHDSVQNL-------PRAQYREYMPAVWQTFVTHRLFL 461
+ S + NL + YRE+MP VWQ+FVTHR+ +
Sbjct: 256 MKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILV 296
>ref|XP_006847000.1| hypothetical protein AMTR_s00017p00136420 [Amborella trichopoda]
gi|548850029|gb|ERN08581.1| hypothetical protein
AMTR_s00017p00136420 [Amborella trichopoda]
Length = 284
Score = 139 bits (351), Expect = 1e-30
Identities = 73/151 (48%), Positives = 98/151 (64%), Gaps = 5/151 (3%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L +C++RFLY+RCY+SLE LAALKTI PQ+Q E++ HG GV LM DSI A+YW+DRAY
Sbjct: 128 LFLACLKRFLYIRCYNSLEFLAALKTIRPQLQTESEGHGIGVHFLMFDSISAYYWIDRAY 187
Query: 186 RS-NNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVCS 362
+ ++ RK S Q I EAVVQEL +LQ HP+LVL TKP++ ++ + ++ S
Sbjct: 188 KPLSSAISNRKPFSLQSITEAVVQELRQLLQFHPMLVLATKPALLGLEFSACHITRKQSS 247
Query: 363 ESSHDSVQNLPRAQ----YREYMPAVWQTFV 443
S + L R YREYMP+ WQ +
Sbjct: 248 SPSATGMLPLSRGAERFLYREYMPSAWQVIL 278
>ref|XP_006394144.1| hypothetical protein EUTSA_v10005594mg [Eutrema salsugineum]
gi|557090783|gb|ESQ31430.1| hypothetical protein
EUTSA_v10005594mg [Eutrema salsugineum]
Length = 355
Score = 138 bits (348), Expect = 2e-30
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 5/194 (2%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
DL SCM+RFLY+RCY SLELL++LKT+ +I ++ + G V +LMIDSIGAF+W DR
Sbjct: 121 DLYVSCMKRFLYLRCYDSLELLSSLKTLHYRI-RQQEACGSQVGVLMIDSIGAFHWTDRL 179
Query: 183 YRSNNTE-EKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
S E RK LS + E +VQE+ +LQ+H L+V+ TK +I Y + + ++
Sbjct: 180 SSSLALETNNRKSLSLTNVVETIVQEMKKLLQVHSLVVIATKTTIYEEKYSTNENSRKFS 239
Query: 360 S--ESSHDSVQNLPRAQYREYMPAVWQTFVTHRLFLEKS--EETNVNGNRKLPIFTSTWD 527
S + S +S + +RE+MP+ WQ FVTH++ + KS ++ G + L ++ W
Sbjct: 240 SNDDLSGNSSSRAHQPPFREFMPSTWQAFVTHKIIIRKSGDHQSLQTGKQSLSAYSLEWL 299
Query: 528 APALRFVEKFIVQD 569
P L +++FIV D
Sbjct: 300 QPQLSSIDRFIVDD 313
>tpg|DAA56621.1| TPA: hypothetical protein ZEAMMB73_585387 [Zea mays]
Length = 347
Score = 138 bits (348), Expect = 2e-30
Identities = 87/199 (43%), Positives = 116/199 (58%), Gaps = 11/199 (5%)
Frame = +3
Query: 6 LMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRAY 185
L CM+RFLY RC S E + ALKT+ Q Q + G G+ +MIDSIGAFYW+DR
Sbjct: 142 LFSDCMQRFLYARCCKSPEFIDALKTV--QSQSRREVSGAGIYFVMIDSIGAFYWIDRGS 199
Query: 186 RSNNTEEKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSI------TANDYLSTRDV 347
+++ E K K L Q I+E+VV EL ILQL P LVLVTK S+ TAND+ RD
Sbjct: 200 QASR-ENKGKTL--QSIFESVVHELRKILQLEPALVLVTKASVYGEGTTTANDF--NRDS 254
Query: 348 KRVCSES----SHDSVQNLPRAQYREYMPAVWQTFVTHRLFLE-KSEETNVNGNRKLPIF 512
+ E + + REYMP++WQ+FVTHR+ L+ ++E +V + LP+
Sbjct: 255 SKYMLEDPSGLGYSRREEERTLSNREYMPSIWQSFVTHRINLQVEAEVPSVLESEVLPLH 314
Query: 513 TSTWDAPALRFVEKFIVQD 569
TS W P L+ EKF + D
Sbjct: 315 TSEWVQPCLKMKEKFSIMD 333
>ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|55583880|sp|Q682D3.2|XRCC2_ARATH RecName: Full=DNA
repair protein XRCC2 homolog; AltName: Full=X-ray repair
cross-complementing protein 2 homolog; Short=AtXRCC2
gi|27524915|emb|CAD12880.1| putative X-ray repair
cross-complementing protein 2 [Arabidopsis thaliana]
gi|332010528|gb|AED97911.1| DNA repair protein
XRCC2-like protein [Arabidopsis thaliana]
Length = 372
Score = 135 bits (341), Expect = 2e-29
Identities = 82/195 (42%), Positives = 120/195 (61%), Gaps = 6/195 (3%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L SCM+RFLY+RCY SLELL++LKT+ +IQ++ + G V +LMIDSIGAF+W DR
Sbjct: 143 ELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQQQ-EACGSQVGVLMIDSIGAFHWTDRL 201
Query: 183 YRSNNTE-EKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
S E RK LS + E +VQEL +L +H L+VL TK +I Y + + ++V
Sbjct: 202 SSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNRKV- 260
Query: 360 SESSHDSVQNLPRAQ---YREYMPAVWQTFVTHRLFLEKSE--ETNVNGNRKLPIFTSTW 524
S + H S +AQ +RE+MP+ WQ FVTH++ + KS ++ G + L ++ W
Sbjct: 261 SSNDHFSGNVASKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQSLQTGQQNLLAYSLEW 320
Query: 525 DAPALRFVEKFIVQD 569
P L +++FIV D
Sbjct: 321 LQPQLSRIDRFIVDD 335
>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|332010527|gb|AED97910.1| DNA repair protein
XRCC2-like protein [Arabidopsis thaliana]
Length = 342
Score = 135 bits (341), Expect = 2e-29
Identities = 82/195 (42%), Positives = 120/195 (61%), Gaps = 6/195 (3%)
Frame = +3
Query: 3 DLMKSCMERFLYMRCYSSLELLAALKTICPQIQKENKKHGKGVCLLMIDSIGAFYWLDRA 182
+L SCM+RFLY+RCY SLELL++LKT+ +IQ++ + G V +LMIDSIGAF+W DR
Sbjct: 143 ELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQQQ-EACGSQVGVLMIDSIGAFHWTDRL 201
Query: 183 YRSNNTE-EKRKKLSFQVIWEAVVQELHFILQLHPLLVLVTKPSITANDYLSTRDVKRVC 359
S E RK LS + E +VQEL +L +H L+VL TK +I Y + + ++V
Sbjct: 202 SSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNRKV- 260
Query: 360 SESSHDSVQNLPRAQ---YREYMPAVWQTFVTHRLFLEKSE--ETNVNGNRKLPIFTSTW 524
S + H S +AQ +RE+MP+ WQ FVTH++ + KS ++ G + L ++ W
Sbjct: 261 SSNDHFSGNVASKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQSLQTGQQNLLAYSLEW 320
Query: 525 DAPALRFVEKFIVQD 569
P L +++FIV D
Sbjct: 321 LQPQLSRIDRFIVDD 335