BLASTX nr result
ID: Ephedra28_contig00028593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028593
(418 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004959556.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 88 1e-15
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea m... 87 2e-15
ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [S... 87 3e-15
ref|XP_006662396.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
ref|XP_006472401.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, par... 86 5e-15
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis] 85 9e-15
ref|NP_201360.1| pentatricopeptide repeat-containing protein [Ar... 85 9e-15
gb|ESW08896.1| hypothetical protein PHAVU_009G083700g [Phaseolus... 85 1e-14
ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_002864963.1| pentatricopeptide repeat-containing protein ... 85 1e-14
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera] 85 1e-14
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 84 1e-14
gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japo... 84 2e-14
ref|XP_003615371.1| Pentatricopeptide repeat-containing protein ... 84 2e-14
>ref|XP_004959556.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Setaria italica]
Length = 628
Score = 90.1 bits (222), Expect = 3e-16
Identities = 52/136 (38%), Positives = 83/136 (61%)
Frame = -2
Query: 411 KPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWT 232
K + RAIHAH+ ++ + F+L++L+ Y +CG V AR +F + + V+WT
Sbjct: 69 KNLADARAIHAHLSRSLFAVDA---FLLNSLIHLYCKCGAVSDARGVFDGMPSRDTVSWT 125
Query: 231 SFMSGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVV 52
S +G QN E + L P ML++++ PN +TF++LLKA AG G+ V +Q+HA +
Sbjct: 126 SLAAGYAQNDMPAEAICL-LPDMLKARSKPNGFTFASLLKA-AGACGDRGVGEQIHALAL 183
Query: 51 KWRHDRNGFVGTALLD 4
K+ D + +VG+ALLD
Sbjct: 184 KYNWDEDVYVGSALLD 199
>ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/107 (44%), Positives = 69/107 (64%)
Frame = -2
Query: 324 TLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQNGHLQETLALHYPLMLRSQTP 145
+LLT Y RCG VD + ++F NP +VTWTS + GLVQNG +E L + MLRS
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGR-EEIALLKFRQMLRSSIT 376
Query: 144 PNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNGFVGTALLD 4
PN++T S++L+AC+ A +Q+HA V+K+ D + +VG AL+D
Sbjct: 377 PNSFTLSSVLRACSSLA-MLEQGKQIHAIVMKFGLDIDKYVGAALID 422
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = -2
Query: 321 LLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQNGHLQETLALHYPLMLRSQTPP 142
L+ +Y++CG V AR++F + + V W S ++ ++NG +E + + Y M+ P
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDI-YQRMVPDGILP 174
Query: 141 NNYTFSTLLKACAGNAGNAHVTQQLHA-AVVKWRHDRNGFVGTALLD 4
+ +TFS++ KA + + G H Q+ H +VV N FVG+AL+D
Sbjct: 175 DEFTFSSVFKAFS-DLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVD 220
>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 88.2 bits (217), Expect = 1e-15
Identities = 52/130 (40%), Positives = 76/130 (58%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
RAIHAHI Q + + +L+ +L Y +CG ++ A+ LF + V+WT +SG
Sbjct: 125 RAIHAHI---QSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGY 181
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
Q+G E LAL +P ML PN +T S+LLKA +G + H +QLHA +K+ +D
Sbjct: 182 SQSGQASEALAL-FPKMLHLGFQPNEFTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDM 239
Query: 33 NGFVGTALLD 4
N VG++LLD
Sbjct: 240 NVHVGSSLLD 249
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/95 (31%), Positives = 53/95 (55%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HAH++K+ +I +TL+ Y + G + A+++F + V+W S +SG Q
Sbjct: 328 VHAHVIKSG---GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ 384
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACA 103
+G E L L + ML+++ PN TF ++L AC+
Sbjct: 385 HGLGAEALQL-FEQMLKAKVQPNEITFLSVLTACS 418
>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 88.2 bits (217), Expect = 1e-15
Identities = 52/130 (40%), Positives = 76/130 (58%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
RAIHAHI Q + + +L+ +L Y +CG ++ A+ LF + V+WT +SG
Sbjct: 125 RAIHAHI---QSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGY 181
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
Q+G E LAL +P ML PN +T S+LLKA +G + H +QLHA +K+ +D
Sbjct: 182 SQSGQASEALAL-FPKMLHLGFQPNEFTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDM 239
Query: 33 NGFVGTALLD 4
N VG++LLD
Sbjct: 240 NVHVGSSLLD 249
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/95 (31%), Positives = 53/95 (55%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HAH++K+ +I +TL+ Y + G + A+++F + V+W S +SG Q
Sbjct: 329 VHAHVIKSG---GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ 385
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACA 103
+G E L L + ML+++ PN TF ++L AC+
Sbjct: 386 HGLGAEALQL-FEQMLKAKVQPNEITFLSVLTACS 419
>tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 87.4 bits (215), Expect = 2e-15
Identities = 51/136 (37%), Positives = 80/136 (58%)
Frame = -2
Query: 411 KPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWT 232
K + RAIHAH+ ++ + F+L++L+ Y +CG V AR +F + + V+WT
Sbjct: 74 KNLAGARAIHAHLSRSCLAGDA---FLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWT 130
Query: 231 SFMSGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVV 52
++G QN E + L P MLR++ PN +TF++LLKA G G + +Q+HA V
Sbjct: 131 YLIAGYAQNYMPAEAIGL-LPDMLRARFRPNGFTFTSLLKA-TGACGGCSIGEQMHALAV 188
Query: 51 KWRHDRNGFVGTALLD 4
K+ D + +VG+ALLD
Sbjct: 189 KYNWDEDVYVGSALLD 204
>ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein
SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 86.7 bits (213), Expect = 3e-15
Identities = 51/136 (37%), Positives = 80/136 (58%)
Frame = -2
Query: 411 KPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWT 232
K + RAIH+H+ +++ + F+L++L+ Y +CG V AR +F I V+WT
Sbjct: 76 KNLAGARAIHSHLSRSRLAGDG---FLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWT 132
Query: 231 SFMSGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVV 52
++G QN E L L P MLR++ P+ +TF++ LKA AG G + +Q+HA V
Sbjct: 133 YLITGYAQNDMPAEALGL-LPDMLRARFRPSGFTFTSFLKA-AGACGGRGIGEQMHALAV 190
Query: 51 KWRHDRNGFVGTALLD 4
K+ D + +VG+ALLD
Sbjct: 191 KYNLDEDVYVGSALLD 206
>ref|XP_006662396.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Oryza brachyantha]
Length = 687
Score = 86.3 bits (212), Expect = 4e-15
Identities = 52/136 (38%), Positives = 78/136 (57%)
Frame = -2
Query: 411 KPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWT 232
K R IHAH+ +Q + F+ ++L+ Y +CG V ARR+F + +WT
Sbjct: 80 KSLGDARTIHAHLAGSQLAGS---VFLENSLIHLYCKCGGVADARRVFDEMSRRDMCSWT 136
Query: 231 SFMSGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVV 52
S ++G QN E L L P MLR + PNN+TF++LLKA AG + ++ + +Q+HA V
Sbjct: 137 SLIAGYTQNDMPDEALGL-LPGMLRGRFKPNNFTFASLLKA-AGASASSGIGEQIHALAV 194
Query: 51 KWRHDRNGFVGTALLD 4
K+ + +VGT LLD
Sbjct: 195 KYDWHDDVYVGTTLLD 210
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/115 (29%), Positives = 61/115 (53%)
Frame = -2
Query: 348 HQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQNGHLQETLALHYP 169
H + ++ TLL Y RCG++D A ++F + + V+W+ ++G + G ET L +
Sbjct: 199 HDDVYVGTTLLDMYARCGRMDLAIKVFDQLESKNGVSWSVLIAGFARKGD-GETTLLKFA 257
Query: 168 LMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNGFVGTALLD 4
M R+ ++T+S++ A AG G + +HA ++K + FVG +LD
Sbjct: 258 EMQRNGFEATHFTYSSVFTAIAG-IGALEQGKWVHAHMIKSGQKLSAFVGNTILD 311
>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 650
Score = 86.3 bits (212), Expect = 4e-15
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HAH+L +Q + + IL+TLL +Y++CG +D A LF + + VTWTS +SG Q
Sbjct: 96 VHAHMLTSQF---NNDLPILNTLLNTYVKCGSLDHAHHLFDEMPHRDLVTWTSLISGYSQ 152
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKAC-AGNAGNAHVTQQLHAAVVKWRHDRN 31
+E+L L +P MLR PN +T S+LLKA AG + +QLHA K D N
Sbjct: 153 LDRPRESLVL-FPHMLRHGLVPNQFTLSSLLKAAGAGPDPDDRHGRQLHAYCFKCGFDSN 211
Query: 30 GFVGTALLD 4
+VGT+L+D
Sbjct: 212 VYVGTSLVD 220
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/130 (29%), Positives = 69/130 (53%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
R +HA+ K N ++ +L+ Y RCG +D ++ +F +R EV+W + ++G
Sbjct: 197 RQLHAYCFKCGFDSN---VYVGTSLVDMYARCGLMDDSQIIFDALRTKNEVSWNALIAGH 253
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
+ G + L L + MLR P ++T+S++ CA +AG+ + +H+ ++K +
Sbjct: 254 ARKGQGEHALRLFWN-MLRGGFKPTHFTYSSVFTVCA-SAGSMEQGKWVHSHMIKSGVNL 311
Query: 33 NGFVGTALLD 4
FVG LLD
Sbjct: 312 VAFVGNTLLD 321
>ref|XP_006472401.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 758
Score = 85.9 bits (211), Expect = 5e-15
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = -2
Query: 417 HQKPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVT 238
++K S+ IHAHI+KT +HQ+FF++ L+ Y +CG ++ A+++F + V+
Sbjct: 86 NRKSLSNAEIIHAHIVKTG---SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVS 142
Query: 237 WTSFMSGLVQNGHLQETLALHYPL-MLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHA 61
WTS +SG VQN Q LA+H L ML + P N T T L AC+ + + + +Q+HA
Sbjct: 143 WTSLISGYVQNS--QPELAIHVFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHA 199
Query: 60 AVVKWRHDRNGFVGTAL 10
VVK++ + + VG +L
Sbjct: 200 YVVKYQTEDDTSVGNSL 216
>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Citrus sinensis]
Length = 670
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/138 (35%), Positives = 77/138 (55%)
Frame = -2
Query: 417 HQKPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVT 238
H K R +HAHIL + + + +T+L +Y +CG +D AR+LF + VT
Sbjct: 108 HLKKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 164
Query: 237 WTSFMSGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAA 58
WT+ +SG QN + + L + MLR PN +T S++LKA A + +Q+HA
Sbjct: 165 WTALISGYSQNDQPENAIIL-FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 223
Query: 57 VVKWRHDRNGFVGTALLD 4
+K+ +D N +VG++LLD
Sbjct: 224 CLKYGYDWNVYVGSSLLD 241
>ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, partial [Citrus
clementina] gi|557552589|gb|ESR63218.1| hypothetical
protein CICLE_v100176691mg, partial [Citrus clementina]
Length = 317
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/138 (35%), Positives = 77/138 (55%)
Frame = -2
Query: 417 HQKPRSSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVT 238
H K R +HAHIL + + + +T+L +Y +CG +D AR+LF + VT
Sbjct: 78 HLKKLKEARIVHAHIL---GSAFKHDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 134
Query: 237 WTSFMSGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAA 58
WT+ +SG QN + + L + MLR PN +T S++LKA A + +Q+HA
Sbjct: 135 WTALISGYSQNDQPENAIIL-FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 193
Query: 57 VVKWRHDRNGFVGTALLD 4
+K+ +D N +VG++LLD
Sbjct: 194 CLKYGYDWNVYVGSSLLD 211
>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
Length = 750
Score = 85.1 bits (209), Expect = 9e-15
Identities = 50/130 (38%), Positives = 76/130 (58%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
+ +HAH L +Q ++ I +T+L Y +CG + AR+LF + VTWT+ +SG
Sbjct: 96 KMVHAHFLNSQFRDDP---VIGNTILNMYAKCGSLADARKLFDEMPLKDIVTWTALISGY 152
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
Q+ +E LAL +PLMLR PN +T S+LLKA N +QLHA +K +D
Sbjct: 153 SQHDQAEEALAL-FPLMLRRGLEPNQFTLSSLLKASGDGTTNKR-GRQLHAYCLKCGYDS 210
Query: 33 NGFVGTALLD 4
+ +VG++L+D
Sbjct: 211 DVYVGSSLVD 220
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/128 (29%), Positives = 67/128 (52%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HA ++K+ F+ +TLL Y + G ++ A+++F + V+W S ++G +
Sbjct: 300 VHAQVIKSG---GRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVKRDVVSWNSMLNGYAR 356
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNG 28
G + L L + +M R P ++T+S+L ACA + G+ + +HA V+K
Sbjct: 357 KGETENALRL-FSMMHREDFKPTDFTYSSLCTACA-STGSLEQGKWVHAHVIKSGGRLVA 414
Query: 27 FVGTALLD 4
FVG LLD
Sbjct: 415 FVGNTLLD 422
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/130 (30%), Positives = 66/130 (50%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
R +HA+ LK + ++ +L+ Y R G + AR +F + EV+W + ++G
Sbjct: 197 RQLHAYCLKCG---YDSDVYVGSSLVDMYARYGHLVEARLIFDGLVTKNEVSWNALIAGH 253
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
+ G + L L + +M R P ++TFS+L ACA + G+ + +HA V+K
Sbjct: 254 SRKGETENALRL-FSMMHREDFKPTHFTFSSLCTACA-STGSLEQGKWVHAQVIKSGGRL 311
Query: 33 NGFVGTALLD 4
FVG LLD
Sbjct: 312 VAFVGNTLLD 321
>ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g65570 gi|8978285|dbj|BAA98176.1| unnamed protein
product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/107 (39%), Positives = 65/107 (60%)
Frame = -2
Query: 324 TLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQNGHLQETLALHYPLMLRSQTP 145
+LLT Y+RC VD + R+F I P +V+WTS +SGLVQNG +E + + M+R
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR-EEMALIEFRKMMRDSIK 365
Query: 144 PNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNGFVGTALLD 4
PN++T S+ L+ C+ N +Q+H V K+ DR+ + G+ L+D
Sbjct: 366 PNSFTLSSALRGCS-NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Score = 56.6 bits (135), Expect = 3e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Frame = -2
Query: 402 SSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFM 223
S + I AH+LK+ ++D L +CG +D AR++F + VTW S +
Sbjct: 82 SGIKTIQAHMLKSGFPAEISGSKLVDASL----KCGDIDYARQVFDGMSERHIVTWNSLI 137
Query: 222 SGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWR 43
+ L+++ +E + + Y LM+ + P+ YT S++ KA + + + AV+
Sbjct: 138 AYLIKHRRSKEAVEM-YRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGL 196
Query: 42 HDRNGFVGTALLD 4
N FVG+AL+D
Sbjct: 197 EVSNVFVGSALVD 209
>gb|ESW08896.1| hypothetical protein PHAVU_009G083700g [Phaseolus vulgaris]
Length = 988
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/130 (36%), Positives = 80/130 (61%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
+ IHA ++K + + F+L +L Y++CG+V+SA R+F I +P +V WT+ +SG
Sbjct: 535 KQIHAVVVKRGF---NLDLFVLSGVLDMYLKCGEVESASRVFSEISSPDDVAWTTMISGC 591
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
V+NG + L+ ++ + L S+ P+ YTF+TL+KAC+ +Q+HA +VK
Sbjct: 592 VENGQEDQALSTYHQMRL-SRVQPDEYTFATLVKACSLLTA-LEQGRQIHANIVKLNCAF 649
Query: 33 NGFVGTALLD 4
+ FV T+L+D
Sbjct: 650 DPFVMTSLVD 659
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/130 (26%), Positives = 66/130 (50%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
+ IH +++ E Q + ++L+ Y++ G V AR +F + ++W + +SG
Sbjct: 334 KQIHGAVVRM---ELDQVVSVGNSLINMYVKSGSVSRARSVFSQMNEVDLISWNTIISGS 390
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
NG L+E + +LR P+ +T +++L+AC+ H+ Q+H +K
Sbjct: 391 ALNG-LEECSVGFFVDLLRDGLLPDQFTIASVLRACSSLEQGCHLATQIHTHAMKAGVAL 449
Query: 33 NGFVGTALLD 4
+ FV TAL+D
Sbjct: 450 DSFVSTALID 459
>ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like, partial [Vitis vinifera]
Length = 262
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/130 (35%), Positives = 77/130 (59%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
R +HAH++ + +NH + + ++ Y +CG +D ARR+F + VTWT+ ++G
Sbjct: 107 RIVHAHLVDSHFLDNH--LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGF 164
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
QN ++ L L +P MLR PN++T S+LLKA +G+ QLHA +K+ +
Sbjct: 165 SQNNRPRDALLL-FPQMLRLGLQPNHFTLSSLLKA-SGSEHGLDPGTQLHAFCLKYGYQS 222
Query: 33 NGFVGTALLD 4
+ +VG+AL+D
Sbjct: 223 SVYVGSALVD 232
>ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310798|gb|EFH41222.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 720
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/107 (39%), Positives = 66/107 (61%)
Frame = -2
Query: 324 TLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQNGHLQETLALHYPLMLRSQTP 145
+LLT Y+RC VD + +F I+ P +VTWTS +SGLVQNG +ET + + M+R
Sbjct: 289 SLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGR-EETALIEFRKMMRDSVK 347
Query: 144 PNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNGFVGTALLD 4
PN++T S+ L+ C+ N +Q+H V K+ DR+ + G+ L++
Sbjct: 348 PNSFTLSSALRGCS-NLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIE 393
>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/130 (35%), Positives = 77/130 (59%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
R +HAH++ + +NH + + ++ Y +CG +D ARR+F + VTWT+ ++G
Sbjct: 107 RIVHAHLVDSHFLDNH--LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGF 164
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
QN ++ L L +P MLR PN++T S+LLKA +G+ QLHA +K+ +
Sbjct: 165 SQNNRPRDALLL-FPQMLRLGLQPNHFTLSSLLKA-SGSEHGLDPGTQLHAFCLKYGYQS 222
Query: 33 NGFVGTALLD 4
+ +VG+AL+D
Sbjct: 223 SVYVGSALVD 232
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/128 (28%), Positives = 64/128 (50%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HA LK + ++ L+ Y RCG +D+A+ F + +EV+W + +SG +
Sbjct: 211 LHAFCLKYG---YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNG 28
G + L L + M R P ++T+S++ ACA + G + +HA ++K
Sbjct: 268 KGEGEHALHLLWK-MQRKNFQPTHFTYSSVFSACA-SIGALEQGKWVHAHMIKSGLKLIA 325
Query: 27 FVGTALLD 4
F+G LLD
Sbjct: 326 FIGNTLLD 333
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HAH++K+ FI +TLL Y + G +D A+R+F + P V+W + ++G Q
Sbjct: 312 VHAHMIKSG---LKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACA 103
+G +ETL + MLR PN +F +L AC+
Sbjct: 369 HGLGKETLD-RFEQMLRIGIEPNEISFLCVLTACS 402
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 84.3 bits (207), Expect = 1e-14
Identities = 46/130 (35%), Positives = 77/130 (59%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
R +HAH++ + +NH + + ++ Y +CG +D ARR+F + VTWT+ ++G
Sbjct: 107 RIVHAHLVDSHFLDNH--LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGF 164
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
QN ++ L L +P MLR PN++T S+LLKA +G+ QLHA +K+ +
Sbjct: 165 SQNNRPRDALLL-FPQMLRLGFQPNHFTLSSLLKA-SGSEHGLDPGTQLHAFCLKYGYQS 222
Query: 33 NGFVGTALLD 4
+ +VG+AL+D
Sbjct: 223 SVYVGSALVD 232
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/128 (29%), Positives = 65/128 (50%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HA LK + ++ L+ Y RCG +D+A+ F + +EV+W + +SG +
Sbjct: 211 LHAFCLKYG---YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNG 28
G + L L + M R P ++T+S++L ACA + G + +HA ++K
Sbjct: 268 KGEGEHALHLLWK-MQRKNFQPTHFTYSSVLSACA-SIGALEQGKWVHAHMIKSGLKLIA 325
Query: 27 FVGTALLD 4
F+G LLD
Sbjct: 326 FIGNTLLD 333
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = -2
Query: 387 IHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQ 208
+HAH++K+ FI +TLL Y + G +D A+R+F + P V+W + ++G Q
Sbjct: 312 VHAHMIKSG---LKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 207 NGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACA 103
+G +ETL + MLR PN +F +L AC+
Sbjct: 369 HGLGKETLD-RFEQMLRIGIEPNEISFLCVLTACS 402
>gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 84.0 bits (206), Expect = 2e-14
Identities = 51/130 (39%), Positives = 78/130 (60%)
Frame = -2
Query: 393 RAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGL 214
RAIHAH+ +Q + F+ ++L+ Y +CG V ARR+F + +WTS ++G
Sbjct: 84 RAIHAHLAGSQFAGS---VFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGY 140
Query: 213 VQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDR 34
QN E L L P MLR + PN +TF++LLKA AG + ++ + +Q+HA VK+
Sbjct: 141 AQNDMPDEALGL-LPGMLRGRFKPNGFTFASLLKA-AGASASSGIGEQIHALTVKYDWHD 198
Query: 33 NGFVGTALLD 4
+ +VG+ALLD
Sbjct: 199 DVYVGSALLD 208
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/115 (28%), Positives = 59/115 (51%)
Frame = -2
Query: 348 HQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFMSGLVQNGHLQETLALHYP 169
H + ++ LL Y RCG++D A +F + + V+W + ++G + G ET L +
Sbjct: 197 HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD-GETTLLMFA 255
Query: 168 LMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWRHDRNGFVGTALLD 4
M R+ ++T+S++ A AG G + +HA ++K + FVG +LD
Sbjct: 256 EMQRNGFEATHFTYSSVFSAIAG-IGALEQGKWVHAHMIKSGERLSAFVGNTILD 309
>ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 765
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/131 (33%), Positives = 76/131 (58%)
Frame = -2
Query: 402 SSPRAIHAHILKTQDTENHQNFFILDTLLTSYMRCGQVDSARRLFGTIRNPTEVTWTSFM 223
SS + IH HI+KT +H++ F+ L+T Y +CG+++ A+++F + V WT+ M
Sbjct: 90 SSTQIIHCHIVKTG---SHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLM 146
Query: 222 SGLVQNGHLQETLALHYPLMLRSQTPPNNYTFSTLLKACAGNAGNAHVTQQLHAAVVKWR 43
G VQN + + L ++L S+ P+NYT + L AC + + + +QLHA ++K+
Sbjct: 147 KGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACT-SLHSLKLGEQLHAYIIKYH 205
Query: 42 HDRNGFVGTAL 10
D + +G AL
Sbjct: 206 VDFDTSIGNAL 216