BLASTX nr result

ID: Ephedra28_contig00028572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00028572
         (623 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157046.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...    58   2e-06

>ref|XP_004157046.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]
          Length = 683

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 20/223 (8%)
 Frame = -1

Query: 611 EVSSLGCLIGNIAAVINKMLECISNSAPAKVDNVSEFLFKLQFTLILAELEKKEQLLDKM 432
           ++    CL+GN+  +    L     S+   VD  S   F L+  L+ +    +  + +  
Sbjct: 319 DIPGYACLLGNLLEISRTALSQPDCSSELAVDLASVTTFLLE--LLPSMKSPRRDIKESA 376

Query: 431 SINNREVAENKHEIQ-----EVKGQI-----QRYLFTYSAACIEYYCEHTSEPDSTSRLT 282
           ++ + +V  +  EI+     +V+ QI      R+L   + A        +   D      
Sbjct: 377 ALGDDDVVVSDQEIELALNKDVEKQICDAIDPRFLLQLANALFGQISRVSGPYDGPD--D 434

Query: 281 KVFKAIFTPNP--HVTCISIS----SNTKAEREMLVRALWSLIKVCHANESWPT----TG 132
           K  KA+ T     HVT  ++         A R  LV  LWS IK CH N+ W +      
Sbjct: 435 KEVKAVGTACAFLHVTFNTLPLEQIMTVLAYRTELVPVLWSFIKKCHENQKWSSFSEKLA 494

Query: 131 VLEGDSSLNWMVPVNLFAGIYQRIVGKLDYDRFYKEQDLISLQ 3
            L GD+   W++P+ +F  +Y+ ++  +D + FY+++  +SL+
Sbjct: 495 YLSGDAP-GWLLPLAVFCPVYKHMLTIIDNEEFYEQEKPLSLK 536


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