BLASTX nr result

ID: Ephedra28_contig00028505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00028505
         (712 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_017284500.1| ATPase AAA [Helicobacter pylori]                   57   8e-06

>ref|WP_017284500.1| ATPase AAA [Helicobacter pylori]
          Length = 818

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
 Frame = +3

Query: 27  EKNVELTKSLESQLK----DSALKENIELRTRLVMQQRNMMQHEVETRELVQRLQSTLAE 194
           +K V+  +  E++ K    D  L EN E   + V + RN+++ + E +E +++L++ L E
Sbjct: 384 QKEVDKKEGAENKEKFQEIDKKLSENYEKLQKCVGETRNILKQKKEQKEKLEKLKTELKE 443

Query: 195 ---KNALH--LEKERLSEECRRSIEILERQTSAIAKLMDECDDNEKKK-DQALNSLRKMN 356
              K A H   + ++  EE +R + IL+R    + +L+++ D   K+  DQ    +  +N
Sbjct: 444 ARIKKAKHDSYDSQKSKEEAKRKLSILDRGHERLNRLLEKIDKKLKELYDQKRPDIETIN 503

Query: 357 EDNDVLKLNLERHSKVIENLINVNADMIEATSCYAKMQDWEKS 485
             N +  LNL ++S   +  I +N+D +E +     + D EK+
Sbjct: 504 --NYLKALNLPKYSLDKDYRIVLNSDALENSEAKIILSDGEKT 544


Top