BLASTX nr result
ID: Ephedra28_contig00028410
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00028410 (620 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus... 111 2e-22 gb|ACH73184.1| replicase polyprotein [Dweet mottle virus] 111 2e-22 gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotc... 111 2e-22 gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotc... 111 2e-22 gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus] 107 3e-21 gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus] 107 3e-21 gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus] 107 3e-21 gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus] 107 3e-21 gb|AAR31772.1| RNA-dependent RNA polymerase [Grapevine rupestris... 70 5e-10 gb|AGV05451.1| polyprotein [Grapevine rupestris stem pitting-ass... 69 1e-09 gb|AAX40968.1| replicase [Grapevine rupestris stem pitting-assoc... 69 1e-09 gb|AFV73392.1| replicase [Grapevine Rupestris stem pitting virus] 69 1e-09 gb|AFV34742.1| RNA-dependent RNA polymerase, partial [Grapevine ... 69 1e-09 gb|AAX40973.1| replicase [Grapevine rupestris stem pitting-assoc... 68 2e-09 emb|CBX19981.1| replicase [Grapevine rupestris stem pitting-asso... 68 2e-09 ref|NP_047281.1| replicase [Rupestris stem pitting-associated vi... 68 2e-09 gb|AAC62910.1| RNA-dependent RNA polymerase [Grapevine rupestris... 68 2e-09 emb|CCD41769.1| RNA-dependent RNA polymerase [Grapevine rupestri... 68 2e-09 gb|AAR14342.2| RNA-dependent RNA polymerase [Grapevine rupestris... 66 9e-09 gb|AFR53034.1| replicase polyprotein [Grapevine rupestris stem p... 63 6e-08 >ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus] gi|81964041|sp|Q91QZ3.1|RDRP_CLBVS RecName: Full=RNA replication protein; Includes: RecName: Full=RNA-directed RNA polymerase; Includes: RecName: Full=Helicase gi|14270249|emb|CAC39422.1| hypothetical protein [Citrus leaf blotch virus] Length = 1962 Score = 111 bits (277), Expect = 2e-22 Identities = 55/111 (49%), Positives = 71/111 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + IY AA+ ++SHSE N FA+SL + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 384 IEL+ NG PH HP S+ ENH+L DV PGVVN + C IKE KV K Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111 >gb|ACH73184.1| replicase polyprotein [Dweet mottle virus] Length = 1962 Score = 111 bits (277), Expect = 2e-22 Identities = 55/111 (49%), Positives = 71/111 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + IY AA+ ++SHSE N FA+SL + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 384 IEL+ NG PH HP S+ ENH+L DV PGVVN + C IKE KV K Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111 >gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotch virus] Length = 1962 Score = 111 bits (277), Expect = 2e-22 Identities = 55/111 (49%), Positives = 71/111 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + IY AA+ ++SHSE N FA+SL + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 384 IEL+ NG PH HP S+ ENH+L DV PGVVN + C IKE KV K Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111 >gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotch virus] Length = 1962 Score = 111 bits (277), Expect = 2e-22 Identities = 55/111 (49%), Positives = 71/111 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + IY AA+ ++SHSE N FA+SL + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 384 IEL+ NG PH HP S+ ENH+L DV PGVVN + C IKE KV K Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111 >gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus] Length = 1987 Score = 107 bits (267), Expect = 3e-21 Identities = 53/112 (47%), Positives = 71/112 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + +Y AA+ ++SHSE N FA++L + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 387 IEL+ NG PH HP S+ ENHIL DV P VV+ I C IKE KV K+ Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112 >gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus] Length = 1987 Score = 107 bits (267), Expect = 3e-21 Identities = 53/112 (47%), Positives = 71/112 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + +Y AA+ ++SHSE N FA++L + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 387 IEL+ NG PH HP S+ ENHIL DV P VV+ I C IKE KV K+ Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112 >gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus] Length = 1987 Score = 107 bits (267), Expect = 3e-21 Identities = 53/112 (47%), Positives = 71/112 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + +Y AA+ ++SHSE N FA++L + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 387 IEL+ NG PH HP S+ ENHIL DV P VV+ I C IKE KV K+ Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112 >gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus] Length = 1987 Score = 107 bits (267), Expect = 3e-21 Identities = 53/112 (47%), Positives = 71/112 (63%) Frame = +1 Query: 52 MASLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLG 231 MA +S K AIE +LG+F+K + +Y AA+ ++SHSE N FA++L + KK + +G Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60 Query: 232 IELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 387 IEL+ NG PH HP S+ ENHIL DV P VV+ I C IKE KV K+ Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112 >gb|AAR31772.1| RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 70.1 bits (170), Expect = 5e-10 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E +SLF+ +L K+ L GI Sbjct: 2 ALSYRTAVEEVLAKFTSDEQSRVSATALKALVDIEESRHSLFSFALPDRCKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH HP +T ENHIL +V P +N +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFKPHSHPVCKTLENHILYNVLPSYIN-NSFYFVGIKDFKLQFLKRRNKDLSLIAL 120 >gb|AGV05451.1| polyprotein [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 68.6 bits (166), Expect = 1e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDIEESQHNLFSFALSDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS-NPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKKRNKDLSLVAL 120 >gb|AAX40968.1| replicase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 68.6 bits (166), Expect = 1e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDIEESQHNLFSFALSDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS-NPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKKRNKDLSLVAL 120 >gb|AFV73392.1| replicase [Grapevine Rupestris stem pitting virus] Length = 2161 Score = 68.6 bits (166), Expect = 1e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDIEESQHNLFSFALSDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS-NPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKKRNKDLSLVAL 120 >gb|AFV34742.1| RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus] Length = 2178 Score = 68.6 bits (166), Expect = 1e-09 Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 2/129 (1%) Frame = +1 Query: 34 FNTYSLMA-SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLK 210 F Y+ A +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K Sbjct: 10 FREYNCNAMALSYRPAVEEVLAKFTSDEQSRVSATALKALVDLEESQHNLFSFALPDRSK 69 Query: 211 KNLTGLGIELFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-S 387 + L GI L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K Sbjct: 70 ERLISSGIYLSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRR 128 Query: 388 NPNLEVLNL 414 N +L ++ L Sbjct: 129 NKDLSLVAL 137 >gb|AAX40973.1| replicase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 68.2 bits (165), Expect = 2e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDMEESQHNLFSFALPDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRRNKDLSLVAL 120 >emb|CBX19981.1| replicase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 68.2 bits (165), Expect = 2e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDIEESQHNLFSFALPDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS-NPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKKRNKDLSLVAL 120 >ref|NP_047281.1| replicase [Rupestris stem pitting-associated virus] gi|3599993|gb|AAC35498.1| replicase [Grapevine rupestris stem pitting-associated virus 1] Length = 2161 Score = 67.8 bits (164), Expect = 2e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDLEESQHNLFSFALPDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRRNKDLSLVAL 120 >gb|AAC62910.1| RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 67.8 bits (164), Expect = 2e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDLEESQHNLFSFALPDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRRNKDLSLVAL 120 >emb|CCD41769.1| RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 67.8 bits (164), Expect = 2e-09 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDLEESQHNLFSFALPDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRRNKDLSLVAL 120 >gb|AAR14342.2| RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 65.9 bits (159), Expect = 9e-09 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A+E +L F ++ R+ A +ALV E + LF+ +L K+ GI Sbjct: 2 ALSYRPAVEEVLAKFTSDEQSRVSATALKALVDIEESQHGLFSFALSDRCKERPISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH HP +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFKPHSHPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRRNKDLSLIAL 120 >gb|AFR53034.1| replicase polyprotein [Grapevine rupestris stem pitting-associated virus] Length = 2161 Score = 63.2 bits (152), Expect = 6e-08 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +1 Query: 58 SLSYKNAIECMLGDFKKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIE 237 +LSY+ A E +L F ++ R+ A +ALV E ++LF+ +L K+ L GI Sbjct: 2 ALSYRPAAEEVLAKFTSDEQSRVSATALKALVDLEESQHNLFSFALPDRSKERLISSGIY 61 Query: 238 LFQNGSFPHFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK-SNPNLEVLNL 414 L PH P +T ENHIL +V P VN +SF IK+ K+Q +K N +L ++ L Sbjct: 62 LSPYSFRPHSRPVCKTLENHILYNVLPSYVN-NSFYFVGIKDFKLQFLKRRNKDLSLVAL 120