BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00028403
         (483 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   132   6e-29
emb|CBI30968.3| unnamed protein product [Vitis vinifera]              132   6e-29
ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containi...   131   8e-29
gb|EMS52689.1| hypothetical protein TRIUR3_07994 [Triticum urartu]    131   1e-28
ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_006451657.1| hypothetical protein CICLE_v10007619mg [Citr...   129   3e-28
ref|NP_193141.2| pentatricopeptide repeat-containing protein [Ar...   129   3e-28
ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
gb|EMT03568.1| hypothetical protein F775_05716 [Aegilops tauschii]    129   4e-28
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein...   129   5e-28
ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arab...   129   5e-28
ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containi...   128   9e-28
gb|EXC21533.1| hypothetical protein L484_014888 [Morus notabilis]     127   1e-27
ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Caps...   127   1e-27
gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protei...   127   2e-27
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27

>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  132 bits (333), Expect = 4e-29
 Identities = 59/151 (39%), Positives = 87/151 (57%)
 Frame = +3

Query: 15  RRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALK 194
           R  +E +  V N ++DMY +C  +EDA   F  +E RT  +W+            + AL 
Sbjct: 273 RSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALA 332

Query: 195 MFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLF 374
           +F  M++ G KPN +TF  +LHACS  GMV +G++ F SM + YG++P + HY CMV LF
Sbjct: 333 LFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLF 392

Query: 375 CKCGLVKKAEALIKKMPCSPDAVFWRCLFSG 467
            + GL+++A   I  MP +P+ V W  L  G
Sbjct: 393 SRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/144 (23%), Positives = 59/144 (40%)
 Frame = +3

Query: 39  VVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALKMFESMLDY 218
           +  N ++    +    E A   F  +  R   +W             K A+ +F  M D 
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239

Query: 219 GAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLFCKCGLVKK 398
           G  PNE+T   VL AC++ G +  G+ +      + G   N+R    ++ ++ KCG ++ 
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRI-HDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298

Query: 399 AEALIKKMPCSPDAVFWRCLFSGL 470
           A  +   M      V W  + +GL
Sbjct: 299 ACRIFDNME-ERTVVSWSAMIAGL 321


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  132 bits (333), Expect = 4e-29
 Identities = 59/151 (39%), Positives = 87/151 (57%)
 Frame = +3

Query: 15  RRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALK 194
           R  +E +  V N ++DMY +C  +EDA   F  +E RT  +W+            + AL 
Sbjct: 273 RSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALA 332

Query: 195 MFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLF 374
           +F  M++ G KPN +TF  +LHACS  GMV +G++ F SM + YG++P + HY CMV LF
Sbjct: 333 LFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLF 392

Query: 375 CKCGLVKKAEALIKKMPCSPDAVFWRCLFSG 467
            + GL+++A   I  MP +P+ V W  L  G
Sbjct: 393 SRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/144 (23%), Positives = 59/144 (40%)
 Frame = +3

Query: 39  VVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALKMFESMLDY 218
           +  N ++    +    E A   F  +  R   +W             K A+ +F  M D 
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239

Query: 219 GAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLFCKCGLVKK 398
           G  PNE+T   VL AC++ G +  G+ +      + G   N+R    ++ ++ KCG ++ 
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRI-HDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298

Query: 399 AEALIKKMPCSPDAVFWRCLFSGL 470
           A  +   M      V W  + +GL
Sbjct: 299 ACRIFDNME-ERTVVSWSAMIAGL 321


>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  132 bits (331), Expect = 6e-29
 Identities = 62/150 (41%), Positives = 91/150 (60%)
 Frame = +3

Query: 9   VVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSA 188
           +V+   + +   GNA++D+YA+C SI  A   F  +E ++  +W             K A
Sbjct: 267 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 326

Query: 189 LKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVH 368
           L++F+ +   G  P+EITF  VL+ACS CGMV+EG + FK MK++YG++P + HY CMV 
Sbjct: 327 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 386

Query: 369 LFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           L  + GLVK+A   I+ MP  P+AV WR L
Sbjct: 387 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 45/158 (28%), Positives = 67/158 (42%)
 Frame = +3

Query: 6   LVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKS 185
           + +R  +ES   V N +V MYA C   E A   F  +  R    WN              
Sbjct: 165 IAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNE 224

Query: 186 ALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMV 365
           AL +F  M   G +P+  T   +L AC+E G +  G+     M  K G+  N+     ++
Sbjct: 225 ALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM-VKVGLDGNLHAGNALL 283

Query: 366 HLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGLQKN 479
            L+ KCG +++A  +  +M      V W  L  GL  N
Sbjct: 284 DLYAKCGSIRQAHKVFDEME-EKSVVSWTSLIVGLAVN 320


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score =  132 bits (331), Expect = 6e-29
 Identities = 62/150 (41%), Positives = 91/150 (60%)
 Frame = +3

Query: 9   VVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSA 188
           +V+   + +   GNA++D+YA+C SI  A   F  +E ++  +W             K A
Sbjct: 122 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 181

Query: 189 LKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVH 368
           L++F+ +   G  P+EITF  VL+ACS CGMV+EG + FK MK++YG++P + HY CMV 
Sbjct: 182 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 241

Query: 369 LFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           L  + GLVK+A   I+ MP  P+AV WR L
Sbjct: 242 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 271



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 45/158 (28%), Positives = 67/158 (42%)
 Frame = +3

Query: 6   LVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKS 185
           + +R  +ES   V N +V MYA C   E A   F  +  R    WN              
Sbjct: 20  IAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNE 79

Query: 186 ALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMV 365
           AL +F  M   G +P+  T   +L AC+E G +  G+     M  K G+  N+     ++
Sbjct: 80  ALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM-VKVGLDGNLHAGNALL 138

Query: 366 HLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGLQKN 479
            L+ KCG +++A  +  +M      V W  L  GL  N
Sbjct: 139 DLYAKCGSIRQAHKVFDEME-EKSVVSWTSLIVGLAVN 175


>ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  131 bits (330), Expect = 8e-29
 Identities = 61/153 (39%), Positives = 90/153 (58%)
 Frame = +3

Query: 6   LVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKS 185
           L ++  + S   + N++V MYARC  +EDA  AF  +++    +W             K 
Sbjct: 471 LSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQ 530

Query: 186 ALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMV 365
           AL MF  M+  G KPN++T+  VL ACS  G+V EGKE F+SM+K +G++P + HY C+V
Sbjct: 531 ALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIV 590

Query: 366 HLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFS 464
            L  + GLV++A   I +MPC  DA+ W+ L S
Sbjct: 591 DLLARSGLVEEARQFINEMPCKADALVWKTLLS 623


>gb|EMS52689.1| hypothetical protein TRIUR3_07994 [Triticum urartu]
          Length = 685

 Score =  131 bits (329), Expect = 1e-28
 Identities = 60/151 (39%), Positives = 91/151 (60%)
 Frame = +3

Query: 6   LVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKS 185
           L ++  +ES   + N++V MY+RC  ++DA  AF  +++R   +W             + 
Sbjct: 359 LSIKAGFESDKGISNSLVSMYSRCGYLDDACRAFDEMDDRNVISWTSVISGLAKHGHAER 418

Query: 186 ALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMV 365
           AL +F  M+  G KPN++T+  VL ACS  G+V EGKE F+SM+K +G+IP + HY CMV
Sbjct: 419 ALPLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHGLIPRMEHYACMV 478

Query: 366 HLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
            L  + GLV++A   I +MPC  DA+ W+ L
Sbjct: 479 DLLARSGLVQEALEFINEMPCKADALIWKTL 509



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
 Frame = +3

Query: 24  WESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALKMFE 203
           W +   VG A++DM+AR   +  A   F  +  RT   W               A+++F 
Sbjct: 63  WGTDVSVGCALIDMFARNGHLVAARKVFDGLVERTVVVWTLMITRYVQGRCAGKAVELFL 122

Query: 204 SMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLFCKC 383
            ML+ G +P+  T + ++ AC+E G V  G++L  S+  + G++ +    + +V ++ K 
Sbjct: 123 GMLEDGFEPDGYTMSSMISACAEQGSVRFGQQL-HSLVLRLGLVSDTCVSSGLVDMYAKL 181

Query: 384 GLVKKAEALIK---KMPCSPDAVFWRCLFSG 467
            + +  E   K   +MP + + + W  L SG
Sbjct: 182 QMEQSMECARKVFTRMP-THNVMLWTALISG 211


>ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
           gi|449521082|ref|XP_004167560.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
          Length = 583

 Score =  130 bits (327), Expect = 2e-28
 Identities = 60/147 (40%), Positives = 85/147 (57%)
 Frame = +3

Query: 24  WESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALKMFE 203
           W+ H  +G A+VDMYA+C  IE A+  F  +  R    WN              AL +FE
Sbjct: 336 WDIH--IGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFE 393

Query: 204 SMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLFCKC 383
            M+  G KPNEITF  +L AC  CG+V+EG++ F +M K Y ++P + HY CM+ LFC+ 
Sbjct: 394 VMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRA 453

Query: 384 GLVKKAEALIKKMPCSPDAVFWRCLFS 464
           GL+++A  L + MP  PD + W  L +
Sbjct: 454 GLLEEAVELARTMPMKPDVLIWGLLLN 480



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 38/154 (24%), Positives = 71/154 (46%)
 Frame = +3

Query: 9   VVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSA 188
           V+ R ++ + V+GNA++DMY +     +A   F  +  R   +W             K +
Sbjct: 228 VIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQS 287

Query: 189 LKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVH 368
           L++F  M   G  P+ I    VL AC+  G ++ G  + + + ++ G+  ++   T +V 
Sbjct: 288 LELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQR-GIKWDIHIGTAIVD 346

Query: 369 LFCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGL 470
           ++ KCG ++ A  +   M    +   W  L  GL
Sbjct: 347 MYAKCGCIEMALKIFYSM-SQRNTFTWNALLCGL 379


>ref|XP_006451657.1| hypothetical protein CICLE_v10007619mg [Citrus clementina]
           gi|557554883|gb|ESR64897.1| hypothetical protein
           CICLE_v10007619mg [Citrus clementina]
          Length = 707

 Score =  129 bits (325), Expect = 3e-28
 Identities = 65/152 (42%), Positives = 90/152 (59%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           G +V+  +E+   VGNA++ MY +C S+E+A  AF  I ++   +WN            K
Sbjct: 359 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 418

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +FESM   G KP++IT   +L ACS  G+V +G E F SM + YGVIPN +HYTCM
Sbjct: 419 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 478

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           V L  + G + +A+ L+K MP  PDA  W  L
Sbjct: 479 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 510


>ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635650|sp|O23266.3|PP308_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
           gi|332657965|gb|AEE83365.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  129 bits (325), Expect = 3e-28
 Identities = 59/158 (37%), Positives = 95/158 (60%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           GLV+   ++S   + NA++DMYA+C  +  A   F+R+ +R   +W             +
Sbjct: 262 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +++ M+ +G KPNE+TF  +++ACS  G V +G+ELF+SM K YG+ P+++HYTC+
Sbjct: 322 KALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGLQK 476
           + L  + GL+ +AE LI  MP  PD   W  L S  ++
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419


>ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X2 [Glycine max]
          Length = 718

 Score =  129 bits (324), Expect = 4e-28
 Identities = 62/152 (40%), Positives = 88/152 (57%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           G VVR  +E   +VGNA+V MY +C  I++A   F  ++++   +WN            +
Sbjct: 370 GQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGR 429

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +FESM+  G KP+EIT   VL ACS  G+ + G E F SM K YG+ PN +HY CM
Sbjct: 430 QALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACM 489

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           + L  + G +++A+ LI+ MP  PDA  W  L
Sbjct: 490 IDLLGRAGCLEEAQNLIRNMPFEPDAATWGAL 521


>gb|EMT03568.1| hypothetical protein F775_05716 [Aegilops tauschii]
          Length = 706

 Score =  129 bits (324), Expect = 4e-28
 Identities = 58/151 (38%), Positives = 91/151 (60%)
 Frame = +3

Query: 6   LVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKS 185
           L ++  +ES   + N++V MY+RC  ++DA  AF  +++    +W             + 
Sbjct: 359 LSIKAGFESDKGISNSLVSMYSRCGYLDDACRAFDEMDDHNVISWTSVISGLAKHGHAER 418

Query: 186 ALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMV 365
           AL +F  M+  G KPN++T+  VL ACS  G+V EGKE F+SM+K +G++P + HY+CMV
Sbjct: 419 ALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHGLVPRMEHYSCMV 478

Query: 366 HLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
            L  + GLV++A   I +MPC  DA+ W+ L
Sbjct: 479 DLLARSGLVQEALDFINEMPCKADALIWKTL 509


>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Glycine max]
          Length = 750

 Score =  129 bits (324), Expect = 4e-28
 Identities = 62/152 (40%), Positives = 88/152 (57%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           G VVR  +E   +VGNA+V MY +C  I++A   F  ++++   +WN            +
Sbjct: 402 GQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGR 461

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +FESM+  G KP+EIT   VL ACS  G+ + G E F SM K YG+ PN +HY CM
Sbjct: 462 QALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACM 521

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           + L  + G +++A+ LI+ MP  PDA  W  L
Sbjct: 522 IDLLGRAGCLEEAQNLIRNMPFEPDAATWGAL 553


>gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 860

 Score =  129 bits (323), Expect = 5e-28
 Identities = 59/148 (39%), Positives = 90/148 (60%)
 Frame = +3

Query: 9   VVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSA 188
           V++  ++S+  + NA++ MYARC  IE A L F  + +R   +W               A
Sbjct: 514 VLKSGYQSNQCICNALISMYARCGHIEAAFLVFNEMGDRNVISWTSMITGFAKHGFATRA 573

Query: 189 LKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVH 368
           L++F  ML+ G +PNEIT+  VL ACS  G+++EG E+F SM  ++G++P + HY CMV 
Sbjct: 574 LEIFHEMLEAGIRPNEITYTAVLSACSHAGLISEGWEIFNSMPIEHGLVPGMEHYACMVD 633

Query: 369 LFCKCGLVKKAEALIKKMPCSPDAVFWR 452
           L  + G +++A  LI  MPC+PDA+ WR
Sbjct: 634 LLGRSGSLREAIELINTMPCTPDALVWR 661



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/156 (21%), Positives = 72/156 (46%)
 Frame = +3

Query: 12  VRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSAL 191
           V+  + S   VGN+++ MYAR   +++A  AF  +  +   ++N            + A 
Sbjct: 414 VKHGFASDDCVGNSLISMYARSGRMDNAQKAFESLFEKNLVSYNTIVDACAKNLDSEGAF 473

Query: 192 KMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHL 371
           ++F  + D   + N  TFA +L   S  G + +G+++   + K  G   N      ++ +
Sbjct: 474 ELFHELTDSKIELNAFTFASLLSGASSVGAIGKGEQIHARVLKS-GYQSNQCICNALISM 532

Query: 372 FCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGLQKN 479
           + +CG ++ A  +  +M    + + W  + +G  K+
Sbjct: 533 YARCGHIEAAFLVFNEMG-DRNVISWTSMITGFAKH 567


>ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
           lyrata] gi|297314154|gb|EFH44577.1| hypothetical protein
           ARALYDRAFT_330113 [Arabidopsis lyrata subsp. lyrata]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-28
 Identities = 59/158 (37%), Positives = 95/158 (60%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           GLV+   ++S   + NA++DMYA+C  +  A   F+R+ +R   +W             +
Sbjct: 199 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 258

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +++ M+ +G KPNE+TF  +++ACS  G V +G+ELF+SM K YG+ P+++HYTC+
Sbjct: 259 KALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCL 318

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGLQK 476
           + L  + GL+ +AE LI  MP  PD   W  L S  ++
Sbjct: 319 LDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 356


>ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Citrus sinensis]
          Length = 778

 Score =  128 bits (321), Expect = 9e-28
 Identities = 64/152 (42%), Positives = 90/152 (59%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           G +V+  +E+   VGNA++ MY +C S+E+A  AF  I ++   +WN            K
Sbjct: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +F+SM   G KP++IT   +L ACS  G+V +G E F SM + YGVIPN +HYTCM
Sbjct: 490 DALMLFKSMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           V L  + G + +A+ L+K MP  PDA  W  L
Sbjct: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581


>gb|EXC21533.1| hypothetical protein L484_014888 [Morus notabilis]
          Length = 636

 Score =  127 bits (320), Expect = 1e-27
 Identities = 57/146 (39%), Positives = 85/146 (58%)
 Frame = +3

Query: 30  SHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALKMFESM 209
           S+  V N ++D+Y +C  +EDA   F ++E RT  +W+            + ALK+F SM
Sbjct: 297 SNVRVSNTLIDLYVKCGCLEDARGVFDKMEERTVVSWSAMIAGLAMHGKAEEALKLFTSM 356

Query: 210 LDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCMVHLFCKCGL 389
              G KPN +TF  +LHACS  G+V++G++ F SM + Y ++P + HY CMV L  + GL
Sbjct: 357 TQVGVKPNGVTFIGLLHACSHMGLVDQGRKFFASMTQDYSIVPRIEHYGCMVDLLSRAGL 416

Query: 390 VKKAEALIKKMPCSPDAVFWRCLFSG 467
           +++A   IK MP  P+ V W  L  G
Sbjct: 417 LQEAHEFIKNMPIDPNGVVWGALLGG 442



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
 Frame = +3

Query: 39  VVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXKSALKMFESMLDY 218
           V  N ++    + + +E A   F  +  R   +W             K A  +F  M   
Sbjct: 199 VAWNIMMTQLIKRDDVEQAYGLFAEMPERNVRSWTLMIAGFVRCGKPKEAANLFLEMEKA 258

Query: 219 GAKPNEITFACVLHACSECGMVNEGKELFK-SMKKKYGVIPNVRHYTCMVHLFCKCGLVK 395
           G KPNE T   VL AC++ G +  G+ + + S +  +G   NVR    ++ L+ KCG ++
Sbjct: 259 GIKPNEATVVAVLAACADLGDLFLGRRIHEYSNQSSFG--SNVRVSNTLIDLYVKCGCLE 316

Query: 396 KAEALIKKMPCSPDAVFWRCLFSGL 470
            A  +  KM      V W  + +GL
Sbjct: 317 DARGVFDKME-ERTVVSWSAMIAGL 340


>ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Capsella rubella]
           gi|482552060|gb|EOA16253.1| hypothetical protein
           CARUB_v10004398mg [Capsella rubella]
          Length = 612

 Score =  127 bits (320), Expect = 1e-27
 Identities = 59/158 (37%), Positives = 95/158 (60%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           GLV+   ++S   + NA++DMYA+C  +  A   F+R+ +R   +W             +
Sbjct: 262 GLVIGLGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +++ M+ +G KPNE+TF  +++ACS  G V +G+ LF+SM K YG+ P+++HYTC+
Sbjct: 322 KALAVYDDMVSHGVKPNEVTFVGLIYACSHVGFVVKGRALFQSMTKDYGIRPSLQHYTCL 381

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFSGLQK 476
           + LF + GL+ +AE LI  MP  PD   W  L S  ++
Sbjct: 382 LDLFGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419


>gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 610

 Score =  127 bits (319), Expect = 2e-27
 Identities = 59/154 (38%), Positives = 91/154 (59%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           GLV+   +ES   + NA+VDMYA+C  I  A   F+++  +   +W             +
Sbjct: 262 GLVIGLGYESCMFISNALVDMYAKCSDILAARDVFSKMLQKDVVSWTSMIVGAAQHGQAE 321

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL +++ M+  G KPNE+TF  +++ACS  G+VN G+ELFKSM + YG+ P+++HYTC+
Sbjct: 322 EALSLYDKMVSLGVKPNEVTFVGLIYACSHVGLVNRGRELFKSMTEDYGIHPSLQHYTCL 381

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCLFS 464
           + L  + G + +AE +I  MP  PD   W  L S
Sbjct: 382 LDLLGRSGYLDEAENIINSMPFKPDEPTWAALLS 415


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  127 bits (319), Expect = 2e-27
 Identities = 60/152 (39%), Positives = 90/152 (59%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           G +++  ++S+  + NA++ MY+RC +IE A   F  +E+R   +W              
Sbjct: 461 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 520

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL+MF  ML+ G KPNEIT+  VL ACS  GM++EG++ F SM K++G++P + HY CM
Sbjct: 521 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 580

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           V L  + GL+ +A   I  MP   DA+ WR L
Sbjct: 581 VDLLGRSGLLVEAMEFINSMPLMADALVWRTL 612


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  127 bits (319), Expect = 2e-27
 Identities = 60/152 (39%), Positives = 90/152 (59%)
 Frame = +3

Query: 3   GLVVRRNWESHYVVGNAVVDMYARCESIEDAVLAFTRIENRTAPNWNXXXXXXXXXXXXK 182
           G +++  ++S+  + NA++ MY+RC +IE A   F  +E+R   +W              
Sbjct: 281 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 340

Query: 183 SALKMFESMLDYGAKPNEITFACVLHACSECGMVNEGKELFKSMKKKYGVIPNVRHYTCM 362
            AL+MF  ML+ G KPNEIT+  VL ACS  GM++EG++ F SM K++G++P + HY CM
Sbjct: 341 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 400

Query: 363 VHLFCKCGLVKKAEALIKKMPCSPDAVFWRCL 458
           V L  + GL+ +A   I  MP   DA+ WR L
Sbjct: 401 VDLLGRSGLLVEAMEFINSMPLMADALVWRTL 432