BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00028215
         (693 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35789.3| unnamed protein product [Vitis vinifera]              163   5e-38
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   163   5e-38
ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containi...   162   7e-38
gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]     158   2e-36
gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [...   155   1e-35
ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containi...   154   3e-35
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   154   3e-35
ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containi...   152   7e-35
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu...   152   7e-35
ref|XP_006406664.1| hypothetical protein EUTSA_v10020183mg [Eutr...   150   3e-34
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   150   5e-34
ref|XP_002883101.1| pentatricopeptide repeat-containing protein ...   149   6e-34
gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protei...   148   2e-33
ref|NP_188429.1| pentatricopeptide repeat-containing protein [Ar...   147   2e-33
ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containi...   147   4e-33
ref|XP_006299483.1| hypothetical protein CARUB_v10015648mg [Caps...   146   7e-33
ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [A...   139   6e-31
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
gb|EPS67329.1| hypothetical protein M569_07444 [Genlisea aurea]       127   4e-27

>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  163 bits (412), Expect = 5e-38
 Identities = 83/186 (44%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           SR IH LC R  ++ +A++LL  LR  G+ PD+L  SS++HALC A R  EAH  L  + 
Sbjct: 296 SRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSF 355

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
             + VPD+RTCNV+I++L+D+++P  TL     +I+ +P F PSL+NYN+LI+ LC    
Sbjct: 356 ASHCVPDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFSQ 415

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
             +A      M   G  PN +SYTTLI GYC+ G+   A +LFD+M   G    PNS+TY
Sbjct: 416 PNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESG--VVPNSLTY 473

Query: 19  SIVALG 2
           S++  G
Sbjct: 474 SVLLKG 479



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
 Frame = -3

Query: 547  IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
            I +LC  G    A +++  +RK G  P  +  + +VH L +    + A++ L   +   +
Sbjct: 552  IDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGY 611

Query: 367  VPDERTCNVIISKL---IDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
            +  E T  V++  L    D     E +Q     + L          YN  + +LC     
Sbjct: 612  MMSEHTYKVLLEALCRDADLCKAREVMQ-----LMLNKEGVDQTRIYNIYLRALCLMNNP 666

Query: 196  IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
             +    +  M ++   P+VI+  T+I+G+C+ G+  EA ++ D M  MG  C P+SVTY+
Sbjct: 667  TELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDM-VMGKFCAPDSVTYT 725

Query: 16   IVALG 2
             +  G
Sbjct: 726  TIICG 730



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547  IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
            +  LC   D+ KA +++Q +        T I +  + ALC      E    L + L    
Sbjct: 622  LEALCRDADLCKAREVMQLMLNKEGVDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQC 681

Query: 367  VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
             PD  T N +I+         E L+ ++ ++  K + AP  V Y  +I  L   G   +A
Sbjct: 682  QPDVITLNTVINGFCKMGRVEEALKVLDDMVMGK-FCAPDSVTYTTIICGLLNLGRTEEA 740

Query: 187  EKCIRG-MEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
               +R  M E G  P V+++  ++ G  +  + N A ++F+ M + G     N++TY+I+
Sbjct: 741  LDVLRRVMPEKGFKPGVVTFNAVLHGLFKLQQANVATEVFNSMVSDGVAA--NTITYTII 798

Query: 10   ALG 2
              G
Sbjct: 799  IDG 801


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score =  163 bits (412), Expect = 5e-38
 Identities = 83/186 (44%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           SR IH LC R  ++ +A++LL  LR  G+ PD+L  SS++HALC A R  EAH  L  + 
Sbjct: 64  SRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSF 123

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
             + VPD+RTCNV+I++L+D+++P  TL     +I+ +P F PSL+NYN+LI+ LC    
Sbjct: 124 ASHCVPDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFSQ 183

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
             +A      M   G  PN +SYTTLI GYC+ G+   A +LFD+M   G    PNS+TY
Sbjct: 184 PNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESG--VVPNSLTY 241

Query: 19  SIVALG 2
           S++  G
Sbjct: 242 SVLLKG 247



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  +RK G  P  +  + +VH L +    + A++ L   +   +
Sbjct: 320 IDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGY 379

Query: 367 VPDERTCNVIISKL---IDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
           +  E T  V++  L    D     E +Q     + L          YN  + +LC     
Sbjct: 380 MMSEHTYKVLLEALCRDADLCKAREVMQ-----LMLNKEGVDQTRIYNIYLRALCLMNNP 434

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
            +    +  M ++   P+VI+  T+I+G+C+ G+  EA ++ D M  MG  C P+SVTY+
Sbjct: 435 TELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDM-VMGKFCAPDSVTYT 493

Query: 16  IVALG 2
            +  G
Sbjct: 494 TIICG 498



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC   D+ KA +++Q +        T I +  + ALC      E    L + L    
Sbjct: 390 LEALCRDADLCKAREVMQLMLNKEGVDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQC 449

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            PD  T N +I+         E L+ ++ ++  K + AP  V Y  +I  L   G   +A
Sbjct: 450 QPDVITLNTVINGFCKMGRVEEALKVLDDMVMGK-FCAPDSVTYTTIICGLLNLGRTEEA 508

Query: 187 EKCIRG-MEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
              +R  M E G  P V+++  ++ G  +  + N A ++F+ M + G     N++TY+I+
Sbjct: 509 LDVLRRVMPEKGFKPGVVTFNAVLHGLFKLQQANVATEVFNSMVSDGVAA--NTITYTII 566

Query: 10  ALG 2
             G
Sbjct: 567 IDG 569


>ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Solanum lycopersicum]
          Length = 676

 Score =  162 bits (411), Expect = 7e-38
 Identities = 88/187 (47%), Positives = 121/187 (64%), Gaps = 2/187 (1%)
 Frame = -3

Query: 556 SRDIHTLC-IRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHR-YLSYA 383
           +R IH LC I GD+ +A++LL  LR  G+ PD+L  SS+VHALC +KR  EAHR +L   
Sbjct: 50  TRRIHKLCAIDGDVDEALRLLDELRLQGYHPDSLNLSSIVHALCDSKRFSEAHRRFLLAV 109

Query: 382 LTPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKG 203
            + + VPDERTCNV+I++L+   +P ET++ I+ +   KP F PSL+NYN+LI+ LC   
Sbjct: 110 SSQSTVPDERTCNVLIARLLYAANPQETVRVISALFYQKPQFVPSLMNYNRLIHQLCTLE 169

Query: 202 MIIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVT 23
               A +    M + G SPN +SYTTLI GYC  G+  EA +LFD+M   G    PN++T
Sbjct: 170 RNRDAHQLFVDMRKRGHSPNAVSYTTLIDGYCGAGEVGEAEKLFDEMSECG--VIPNALT 227

Query: 22  YSIVALG 2
           YS +  G
Sbjct: 228 YSALIRG 234



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +H L   GD  +A +LL+   + G+ P       LV  LC     ++A+  ++  L    
Sbjct: 342 VHGLVKEGDCFRAYQLLEEGIQFGYLPSEFTYKLLVEGLCYVNDLVKANEVVNMMLYKKD 401

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
               R  N+ +  L    +P+E L  +  +  L+    P ++  N +IN  CK G I +A
Sbjct: 402 NDKTRIYNIYLRALCVVDNPTELLNVL--VTMLQTQCQPDVITLNTVINGFCKMGRIEEA 459

Query: 187 EKCIRGMEESGV-SPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
           +K  + M      +PN +++TT+ISG+ + G+  EA +L  ++        PN VTY+ V
Sbjct: 460 QKVFKDMMMGKFCAPNGVTFTTVISGFLKLGRVEEALELLHRVMP-EKGLKPNVVTYNAV 518

Query: 10  ALG 2
             G
Sbjct: 519 IQG 521



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 46/182 (25%), Positives = 89/182 (48%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G  + A +++  +RK G +P  +  +++VH L +      A++ L   +   +
Sbjct: 307 IDSLCRFGRYNGAARIVYMIRKRGFDPSLVSYNTIVHGLVKEGDCFRAYQLLEEGIQFGY 366

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
           +P E T  +++  L       +  + +N ++  K      +  YN  + +LC      + 
Sbjct: 367 LPSEFTYKLLVEGLCYVNDLVKANEVVNMMLYKKDNDKTRI--YNIYLRALCVVDNPTEL 424

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
              +  M ++   P+VI+  T+I+G+C+ G+  EA ++F  M  MG  C PN VT++ V 
Sbjct: 425 LNVLVTMLQTQCQPDVITLNTVINGFCKMGRIEEAQKVFKDM-MMGKFCAPNGVTFTTVI 483

Query: 7   LG 2
            G
Sbjct: 484 SG 485



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
 Frame = -3

Query: 589 LIFTEETIKQRSRDIH--TLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKR 416
           +++ ++  K R  +I+   LC+  + ++ + +L T+ +   +PD +  +++++  C+  R
Sbjct: 396 MLYKKDNDKTRIYNIYLRALCVVDNPTELLNVLVTMLQTQCQPDVITLNTVINGFCKMGR 455

Query: 415 SLEAHRYLSYALTPNW-VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVN 239
             EA +     +   +  P+  T   +IS  +      E L+ ++ ++  K    P++V 
Sbjct: 456 IEEAQKVFKDMMMGKFCAPNGVTFTTVISGFLKLGRVEEALELLHRVMPEKG-LKPNVVT 514

Query: 238 YNKLINSLCKKGMIIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEA 83
           YN +I  L K   I +A +    M   G+  +  +YT +I G  E+ K +EA
Sbjct: 515 YNAVIQGLFKLHRIDEAMEVFHSMVSGGIVADCTTYTVIIDGLFESNKVDEA 566


>gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]
          Length = 714

 Score =  158 bits (399), Expect = 2e-36
 Identities = 78/183 (42%), Positives = 121/183 (66%), Gaps = 1/183 (0%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           ++ IH LC R  ++ +A+ LL  L   G+ PD+L  SS+VHALC + R  EAH  L  ++
Sbjct: 70  TKTIHNLCTRHRNVDEALCLLDRLSLRGYRPDSLNLSSIVHALCDSNRFDEAHHRLILSV 129

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
             N VPDERTCNV+I++L+ ++ P  TL+ I  +I  KP F PSLVNYN+LI+ LC    
Sbjct: 130 DSNCVPDERTCNVLIARLLGSKCPDATLRVIRKLIEFKPEFVPSLVNYNRLIDQLCSFSR 189

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
           + +A +    +++ G  PN +++TTLI+GYC+ G+ + A ++F++M   G P  PNS+T+
Sbjct: 190 VAEAHRLFFDLQDRGHCPNAVTFTTLINGYCKVGELDCAHKMFEEMSERGVP--PNSLTF 247

Query: 19  SIV 11
           S++
Sbjct: 248 SVL 250



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +H LC  G   +A +LL+   + G+ P       LV  L      L+A   L   L    
Sbjct: 361 VHGLCNEGGCMRAYQLLEEGIEFGYSPSDYTYKVLVECLSLKSDLLKAKEVLEVMLKKKG 420

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
           V   R  N+ +  L    + +E L  I  +  L+    P ++  N +I   CK G + +A
Sbjct: 421 VDKTRIYNIYLRALCLMNNATELLNVI--VFMLQSQCQPDVITLNTVIKGFCKMGRVEEA 478

Query: 187 EKCIRGMEESGVS-PNVISYTTLISGYCENGKFNEACQLFDKMCAM-GSPCFPNSVTYSI 14
            K +  M     S P+V++YTT+I G    G+  +A  L    C M  +   P  VTY+ 
Sbjct: 479 LKVLNDMMVGKFSAPDVMTYTTIIFGLLNVGRIQDAMDLLH--CGMLDNGVNPGVVTYNA 536

Query: 13  VALG 2
           V  G
Sbjct: 537 VLRG 540



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  +RK G  P  +  +S+VH LC     + A++ L   +   +
Sbjct: 326 IDSLCKAGRHHGASRIVYIMRKRGLIPCLVSYNSIVHGLCNEGGCMRAYQLLEEGIEFGY 385

Query: 367 VPDERTCNVIISKLI---DTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
            P + T  V++  L    D     E L+     + LK         YN  + +LC     
Sbjct: 386 SPSDYTYKVLVECLSLKSDLLKAKEVLE-----VMLKKKGVDKTRIYNIYLRALCLMNNA 440

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
            +    I  M +S   P+VI+  T+I G+C+ G+  EA ++ + M  +G    P+ +TY+
Sbjct: 441 TELLNVIVFMLQSQCQPDVITLNTVIKGFCKMGRVEEALKVLNDM-MVGKFSAPDVMTYT 499

Query: 16  IVALG 2
            +  G
Sbjct: 500 TIIFG 504


>gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
          Length = 681

 Score =  155 bits (392), Expect = 1e-35
 Identities = 77/186 (41%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SRDIHTLCI-RGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           ++ IH+LC    ++ +A+ LL  LR  G+ PD+L  SS++HALC + R  EAH   ++++
Sbjct: 50  TKKIHSLCTAHRNVDQALHLLDRLRLLGYRPDSLNLSSILHALCDSNRFAEAHHRFAHSI 109

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
             + VPDERTCNVI+++L+D+++P  TL+ ++ +  +KP F PSL+NYN+L++ LC    
Sbjct: 110 ASDCVPDERTCNVIVARLLDSRTPHTTLRLLHRLSHVKPEFVPSLINYNRLMDQLCLLLR 169

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
             +A +    M   G  PN +SYTTLI+GYC  G+  +A ++FD+M   G    PNS+TY
Sbjct: 170 PWEAHRVFFDMLSKGHCPNAVSYTTLINGYCLIGELGDAQKVFDEMGEKG--VAPNSLTY 227

Query: 19  SIVALG 2
           S++  G
Sbjct: 228 SVMIRG 233



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 41/163 (25%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC+  + ++ +  L ++ +   +PD +  + +V+ LC+  R  +A + L+  +T  +
Sbjct: 411 LRALCLMNNTTELLNGLVSMLQTQCQPDVITLNIVVNGLCKMGRIEDASKVLNDMMTGKF 470

Query: 367 -VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQ 191
             PD  T   +IS L++     E L  ++H++  K  F+P++V YN ++  L K     +
Sbjct: 471 CAPDVVTFTTMISGLLNVGRTEEALGLLHHVMPEKG-FSPNVVTYNAVLRGLFKHKQARE 529

Query: 190 AEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKM 62
           A +    M   GV+ +  +YT +I G C++ +  EA + +D++
Sbjct: 530 AMELFNLMVSDGVAADSTTYTIIIDGLCDSDQIEEAKRFWDEV 572



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  +R AG  P     +S++H L +    + A++ L   +   +
Sbjct: 306 IDSLCKAGRHHGASRIVYIMRNAGFAPKLTSYNSILHGLSKEGGCMRAYQLLEEGIKFGY 365

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIIS---------------------------- 272
            P E T  V++  L     P +  + +++++S                            
Sbjct: 366 FPSEYTYKVLVEGLCQESDPHKAREVLHYMLSKEGVDRTRMYNMYLRALCLMNNTTELLN 425

Query: 271 -----LKPWFAPSLVNYNKLINSLCKKGMIIQAEKCIRGMEESG-VSPNVISYTTLISGY 110
                L+    P ++  N ++N LCK G I  A K +  M      +P+V+++TT+ISG 
Sbjct: 426 GLVSMLQTQCQPDVITLNIVVNGLCKMGRIEDASKVLNDMMTGKFCAPDVVTFTTMISGL 485

Query: 109 CENGKFNEACQLFDKMCAMGSPCF-PNSVTYSIVALG 2
              G+  EA  L   +  M    F PN VTY+ V  G
Sbjct: 486 LNVGRTEEALGLLHHV--MPEKGFSPNVVTYNAVLRG 520



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
 Frame = -3

Query: 526 GDISKAIKLLQ-TLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERT 350
           G   +A+ LL   + + G  P+ +  ++++  L + K++ EA    +  ++     D  T
Sbjct: 489 GRTEEALGLLHHVMPEKGFSPNVVTYNAVLRGLFKHKQAREAMELFNLMVSDGVAADSTT 548

Query: 349 CNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVN----YNKLINSLCKKGMIIQAEK 182
             +II  L D+    E  +  + +I    W  PS ++    Y  +I  +C  G   +A  
Sbjct: 549 YTIIIDGLCDSDQIEEAKRFWDEVI----W--PSKIHDNFVYAAIIKGICHSGKFDEACH 602

Query: 181 CIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
            +  + ++GVSPN+ SY  +I   C+ G   EA ++  +M   G    P+SVT+ I+
Sbjct: 603 FLYELVDAGVSPNIYSYNIVIDAACKLGLKKEAYEVVKEMRRNG--LAPDSVTWRIL 657


>ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like isoform X1 [Citrus sinensis]
           gi|568848405|ref|XP_006478001.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g18020-like isoform X2 [Citrus sinensis]
           gi|568848407|ref|XP_006478002.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g18020-like isoform X3 [Citrus sinensis]
           gi|568848409|ref|XP_006478003.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g18020-like isoform X4 [Citrus sinensis]
          Length = 676

 Score =  154 bits (388), Expect = 3e-35
 Identities = 81/196 (41%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
 Frame = -3

Query: 586 IFTEETIKQRSRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSL 410
           I T E+ +  ++ IH LC +  ++ +A++ L  LR  G+ P++L  SS++HALC A R  
Sbjct: 44  INTHESEQDITKKIHRLCTKDRNVDEALRFLDHLRIFGYRPNSLNISSIIHALCDANRFA 103

Query: 409 EAHRYLSYALTPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNK 230
           EAH     +++   +PDERTCNVII+ L+ +++P +TL+ I  + ++KP F PSLVNYN 
Sbjct: 104 EAHHRFLLSISSRCIPDERTCNVIIACLLGSKNPLDTLRVIGCLYNVKPEFVPSLVNYNC 163

Query: 229 LINSLCKKGMIIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMG 50
           L++ L     + +A K    M+  G  PNV+SYTTLI GYC  G+ + A ++FD+M   G
Sbjct: 164 LMDQLGGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCG 223

Query: 49  SPCFPNSVTYSIVALG 2
               PNS+TYS++  G
Sbjct: 224 --VLPNSLTYSVLVRG 237



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 45/182 (24%), Positives = 89/182 (48%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  +RK G  P  +  +S+VH LC+    + A++ L   +   +
Sbjct: 310 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 369

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
           +P E T  V++  L       +  + +  ++S K      + N    + +LC      + 
Sbjct: 370 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNI--YLRALCLIKNPSEL 427

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
              +  M ++   P+VI+  T+I+G+C+ G+  EA ++ + M A G  C P++VT++ + 
Sbjct: 428 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA-GKFCAPDAVTFTTII 486

Query: 7   LG 2
            G
Sbjct: 487 FG 488



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
 Frame = -3

Query: 526 GDISKAIKLL-QTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERT 350
           G I +A+ LL Q + + G+ P  +  ++++  L + +R  EA    +  L    V D  T
Sbjct: 493 GRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTT 552

Query: 349 CNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVN----YNKLINSLCKKGMIIQAEK 182
             ++I  L ++    E  +  + I+    W  PS ++    Y  +I  LC+ G I +A  
Sbjct: 553 YAIVIDGLCESNQLDEAKRFWDDIV----W--PSNIHDNYVYAAMIKGLCRSGKINEAVH 606

Query: 181 CIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
            +  + +SGV+PN++ Y  +I G C+     EA Q+  +M   G    P++VT+ I+
Sbjct: 607 FLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG--LNPDAVTWRIL 661



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           IH  C  G++  A K+   +R  G  P++L  S LV  + +  R +E    L + L    
Sbjct: 200 IHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRT-RDVERANVLMFKLWERM 258

Query: 367 VPDERTC--NVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNY--NKLINSLCKKGM 200
             +E     N   + L+D+      +  +  I    P        +    +I+SLC+ G 
Sbjct: 259 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 318

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
              A + +  M + G++P+++SY +++ G C++G    A QL ++    G    P+  TY
Sbjct: 319 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG--YLPSEHTY 376

Query: 19  SIVALG 2
            ++  G
Sbjct: 377 KVLVEG 382


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  154 bits (388), Expect = 3e-35
 Identities = 76/174 (43%), Positives = 110/174 (63%)
 Frame = -3

Query: 523 DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERTCN 344
           ++ +A++LL  LR  G+ PD+L  SS++HALC A R  EAH  L  +   + VPD+RTCN
Sbjct: 366 NVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTCN 425

Query: 343 VIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQAEKCIRGME 164
           V+I++L+D+++P  TL     +I+ +P F PSL+NYN+LI+ LC      +A      M 
Sbjct: 426 VLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDMR 485

Query: 163 ESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVALG 2
             G  PN +SYTTLI GYC+ G+   A +LFD+M   G    PNS+TYS++  G
Sbjct: 486 SRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESG--VVPNSLTYSVLLKG 537



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 44/182 (24%), Positives = 87/182 (47%)
 Frame = -3

Query: 547  IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
            I +LC  G    A +++  +RK G  P  +  + +VH L +    + A++ L   +   +
Sbjct: 610  IDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGY 669

Query: 367  VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            +  E T  V++  L       +  + +  +++ +      +  YN  + +LC      + 
Sbjct: 670  MMSEHTYKVLLEALCRDADLCKAREVMQLMLNKEGVDQTRI--YNIYLRALCLMNNPTEL 727

Query: 187  EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
               +  M ++   P+VI+  T+I+G+C+ G+  EA ++ D M  MG  C P+SVTY+ + 
Sbjct: 728  LNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDM-VMGKFCAPDSVTYTTII 786

Query: 7    LG 2
             G
Sbjct: 787  CG 788


>ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Solanum tuberosum]
          Length = 680

 Score =  152 bits (385), Expect = 7e-35
 Identities = 84/187 (44%), Positives = 119/187 (63%), Gaps = 2/187 (1%)
 Frame = -3

Query: 556 SRDIHTLC-IRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAH-RYLSYA 383
           +R IH LC I G++ +A++LL  LR  G+ PD+L  SS+VHALC + R  EAH R+L   
Sbjct: 50  TRRIHKLCAIDGNVDEALRLLDGLRLQGYHPDSLNLSSIVHALCDSHRFSEAHQRFLLAV 109

Query: 382 LTPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKG 203
            + + VPDERTCNV+I++L+   +P E+++ I+ +   KP F PSL+NYN+LI+ LC   
Sbjct: 110 SSQSTVPDERTCNVLIARLLYAATPQESVRVISALFYQKPQFVPSLMNYNRLIHQLCTLE 169

Query: 202 MIIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVT 23
               A +    M + G SPN +SYTTLI GYC  G+  EA +LF +M   G    PN++T
Sbjct: 170 RNRDAHQLFVDMRKRGHSPNAVSYTTLICGYCGVGEVREAEKLFAEMSECG--VIPNALT 227

Query: 22  YSIVALG 2
           YS +  G
Sbjct: 228 YSALIRG 234



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +H L   GD  +A +LL+   + G+ P       LV  LC     ++A   ++  L    
Sbjct: 342 VHGLVKEGDCFRAYQLLEEGIQFGYLPSEFTYKLLVEGLCHVNDLVKAKEIVNMMLNKKD 401

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
               R  N+ +  L    +P+E L  +  +  L+    P ++  N +IN  CK G I +A
Sbjct: 402 NDKTRIYNIYLRALCVVDNPTELLNVL--VTMLQTQCQPDVITLNTVINGFCKMGRIEEA 459

Query: 187 EKCIRGME-ESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
           +K  + M  E   +P+ +++TT+ISG+ + G+  EA +L  ++        PN VTY+ V
Sbjct: 460 QKVFKDMMMEKFCAPDGVTFTTVISGFLKLGRVEEALELLHRVMP-EKGLKPNVVTYNAV 518

Query: 10  ALG 2
             G
Sbjct: 519 IQG 521



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC+  + ++ + +L T+ +   +PD +  +++++  C+  R  EA +     +   +
Sbjct: 412 LRALCVVDNPTELLNVLVTMLQTQCQPDVITLNTVINGFCKMGRIEEAQKVFKDMMMEKF 471

Query: 367 -VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQ 191
             PD  T   +IS  +      E L+ ++ ++  K    P++V YN +I  L K   I +
Sbjct: 472 CAPDGVTFTTVISGFLKLGRVEEALELLHRVMPEKG-LKPNVVTYNAVIQGLFKLHRIDE 530

Query: 190 AEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEA 83
           A +    M   G+  +  +YT +I G  E+ K +EA
Sbjct: 531 AMEVFHSMLSGGIVADCTTYTVIIDGLFESNKVDEA 566


>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
           gi|222869094|gb|EEF06225.1| hypothetical protein
           POPTR_0015s04490g [Populus trichocarpa]
          Length = 668

 Score =  152 bits (385), Expect = 7e-35
 Identities = 80/219 (36%), Positives = 129/219 (58%), Gaps = 1/219 (0%)
 Frame = -3

Query: 655 PIPYAEPSSQETNTITTQEDDTLIFTEETIKQRSRDIHTLCIRG-DISKAIKLLQTLRKA 479
           P+ +     Q        +  ++  T  +    ++ IH LC +  ++ +A++LL  LR  
Sbjct: 22  PLSFLSTHPQNQEQALNHQQQSICITNRSYW--TQKIHDLCTKHRNVDEALRLLDHLRLR 79

Query: 478 GHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERTCNVIISKLIDTQSPSET 299
           G+ PD+L  SS++H LC A R  EAH+ L   LT   VPDERTCNV++++L+ ++ P  T
Sbjct: 80  GYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRT 139

Query: 298 LQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQAEKCIRGMEESGVSPNVISYTTLI 119
           L  I+ +I  KP F PSL+NYN+LI+  C   +   A + +  M   G  P+++SYTTL+
Sbjct: 140 LNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLV 199

Query: 118 SGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVALG 2
           +GY + G+ ++A +LFD+M   G    PNS++YS++  G
Sbjct: 200 NGYSKIGEISDAYKLFDEMPEWG--VVPNSLSYSLLIRG 236



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 52/182 (28%), Positives = 83/182 (45%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC   D+ KA ++L+ +   G    T I +  + ALC      E    L   L  N 
Sbjct: 379 VEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNC 438

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            PD  T N +I+         E L+ +N +++ K + AP  V +  +I+ L   G   +A
Sbjct: 439 QPDVITLNTVINGFCKMGRVEEALKVLNDMMTGK-FSAPDAVTFTSIISGLLNVGRSQEA 497

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
              +  M E G++P V++Y  ++ G  +     EA  +FD+M   G     NS TYSI+ 
Sbjct: 498 RNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAA--NSQTYSIIV 555

Query: 7   LG 2
            G
Sbjct: 556 EG 557



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 41/182 (22%), Positives = 84/182 (46%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  +RK G  P  +  +S++H LC+    + A++ L   +   +
Sbjct: 309 IDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGY 368

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
           +  E T  V++  L       +  + +   + L          YN  + +LC      + 
Sbjct: 369 LLSEYTYKVLVEALCQAMDLDKAREVLK--VMLNKGGMDRTRIYNIYLRALCLMNNPTEL 426

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
              +  M ++   P+VI+  T+I+G+C+ G+  EA ++ + M   G    P++VT++ + 
Sbjct: 427 LNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMT-GKFSAPDAVTFTSII 485

Query: 7   LG 2
            G
Sbjct: 486 SG 487



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
 Frame = -3

Query: 526 GDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW--VPDER 353
           G+IS A KL   + + G  P++L  S L+  + + KR +E  R L + L        D+ 
Sbjct: 206 GEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLR-KRDIERGRELMHVLFQRMRHEEDQS 264

Query: 352 TCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVN----YNKLINSLCKKGMIIQAE 185
             +     L+D          +  I    P    + VN    Y  LI+SLCK G    A 
Sbjct: 265 VNSAAFDNLVDCLCREGLFNEVFMIAEEMP--QGNRVNEDFAYGHLIDSLCKVGRSHGAS 322

Query: 184 KCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMG 50
           + +  M + G +P+V+SY ++I G C+ G    A QL ++    G
Sbjct: 323 RVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFG 367


>ref|XP_006406664.1| hypothetical protein EUTSA_v10020183mg [Eutrema salsugineum]
           gi|557107810|gb|ESQ48117.1| hypothetical protein
           EUTSA_v10020183mg [Eutrema salsugineum]
          Length = 694

 Score =  150 bits (380), Expect = 3e-34
 Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
 Frame = -3

Query: 553 RDIHTLC-IRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALT 377
           R IH+ C +R +  +A+++L  L   G+ PD+L  SS++H+LC A R  EAHR     + 
Sbjct: 73  RRIHSSCTVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFVA 132

Query: 376 PNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
             ++PDERTCNVII++L+D+ SP  TL  I+ +I +K  F PSL NYN++IN LC    +
Sbjct: 133 SGFIPDERTCNVIIARLLDSGSPVSTLGVIHRLIGVKKEFVPSLTNYNRMINQLCLIYRV 192

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
           I A K +  M   G  PNV++YTTLI GYCE  +   A ++ D+M A G    PNS+T S
Sbjct: 193 IDAHKLVFDMRNRGHLPNVVTYTTLIGGYCEIRELEVAHKVLDEMRAFG--IRPNSLTLS 250

Query: 16  IVALG 2
           ++  G
Sbjct: 251 VLIGG 255



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           + +LC   D  KA  +L+ + +      T I +  + ALC      E    L   L  + 
Sbjct: 398 VESLCKEYDTDKARNVLELMLRKEGTDRTRIYNIYLRALCVVDNPTEILNVLICMLQGDC 457

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            PDE T N +I          + ++ +  +++ K + AP  V    ++  L  +G   +A
Sbjct: 458 RPDEYTLNTVIDGFCKMGRVDDAVKVLGDMMTGK-FCAPDAVTLTTVMCGLLTQGKAEEA 516

Query: 187 EKCI-RGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
              + R M E+G  P V++Y  +I G  +  K +EA  +FD+M   G     ++ TY+I+
Sbjct: 517 LDVLNRVMPENGFKPGVVTYNAVIRGLFKLHKGDEAMCVFDQMVKAGVSA--DNTTYAII 574

Query: 10  ALG 2
             G
Sbjct: 575 IDG 577


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  150 bits (378), Expect = 5e-34
 Identities = 77/188 (40%), Positives = 117/188 (62%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           ++ IH LC +   + +A+ LL  LR +G+ PD+L  SS++HALC AKR  EAH      +
Sbjct: 61  TKKIHLLCTQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCI 120

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
             + VPDERTCNV+I++L+D+Q P  TL  +  +  +KP F PSL+NYN+ I   C+   
Sbjct: 121 ASDCVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQ 180

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKM--CAMGSPCFPNSV 26
              A + +  M   G  PNV+++T+L++GYC  G+   A +LFD+M  C++     PNS+
Sbjct: 181 PDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSV----VPNSL 236

Query: 25  TYSIVALG 2
           TYS++  G
Sbjct: 237 TYSVLIRG 244



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 39/182 (21%), Positives = 86/182 (47%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  ++K G  P  +  +S++H LC+ +  + A++     +   +
Sbjct: 318 IDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGY 377

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
           +P E T  V++  L       +  + +  +++        +  YN  + +LC      + 
Sbjct: 378 LPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRI--YNIYLRALCLTNSATEL 435

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
              +  M ++   P+VI+  T+++G+C+  +  EA  +   M  MG  C P++VT++ + 
Sbjct: 436 LNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDM-TMGKFCAPDAVTFTTII 494

Query: 7   LG 2
            G
Sbjct: 495 AG 496



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
 Frame = -3

Query: 526  GDISKAIKLL-QTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERT 350
            G   +A+ LL + + + G  P     ++++H L + + + EA R     L      D +T
Sbjct: 501  GRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAAGVAADSKT 560

Query: 349  CNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVN----YNKLINSLCKKGMIIQAEK 182
              +II  L ++    +  +  + +I    W  PS ++    Y  ++  LC+ G + +A  
Sbjct: 561  YTLIIDGLCESGLIDKAKKLWDDVI----W--PSRIHDDFVYASILKGLCRAGKLDEACH 614

Query: 181  CIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
             +  + +SGVSPN+ISY  +I   C+ G   EA Q+  +M   G    P++VT+ I+
Sbjct: 615  FLYELVDSGVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNG--LTPDAVTWRIL 669


>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328941|gb|EFH59360.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score =  149 bits (377), Expect = 6e-34
 Identities = 80/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
 Frame = -3

Query: 553 RDIHTLC-IRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALT 377
           R IH++C +R +  +A+++L  L   G+ PD+L  SS++H+LC A R  EAHR     + 
Sbjct: 59  RRIHSICAVRRNPDEALRVLDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFVA 118

Query: 376 PNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
             ++PDERTCNVII++L+D +SP  T   I  +I  K  F PSL NYN+LIN LC    +
Sbjct: 119 SGFIPDERTCNVIIARLLDLRSPVSTFGVIQRLIGFKKEFVPSLTNYNRLINQLCLIYRV 178

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
           I A K +  M   G  PNV+++TTLI GYCE  +   A ++FD+M   G    PNS+T S
Sbjct: 179 IDAHKLVFDMRNRGHLPNVVTFTTLIGGYCEIRELEVAHKVFDEM--RGCGIRPNSLTMS 236

Query: 16  IVALG 2
           ++  G
Sbjct: 237 VLIGG 241


>gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 690

 Score =  148 bits (373), Expect = 2e-33
 Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPN 371
           IH LC +  ++ +AI LL TL   G+ PD L  SS++HALC + R  EAH     +L+ +
Sbjct: 61  IHNLCTKHRNVDEAISLLDTLCLHGYRPDYLNLSSIIHALCDSNRFSEAHHRFLLSLSSH 120

Query: 370 WVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQ 191
            +PDERTCNV+I++L+ +++P  TL  I  ++++K  F PSL N+N+LI+  C    +  
Sbjct: 121 LIPDERTCNVLIARLLHSKTPHSTLHVIRSLLNVKAQFVPSLTNFNRLIDQFCADLRVDI 180

Query: 190 AEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
             +    M+  G  PN ++YTTLISGY   G    A +LFD+M A G   FPNS+TYS++
Sbjct: 181 GHRLFFYMKSKGQLPNAVTYTTLISGYVGIGDLGVAFKLFDEMRACG--VFPNSLTYSVL 238

Query: 10  ALG 2
             G
Sbjct: 239 ICG 241



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           IH LC  G   +A +L +   + G+ P       LV  LC+     +A + L + L    
Sbjct: 350 IHGLCKEGGCMRAYQLFEEGIEFGYLPSEHTYKILVEGLCRESDFHKARQVLQFMLNKKG 409

Query: 367 VPDERTCNVIISKL-IDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQ 191
           +   R  N+ +  L +   +P+E L  +  +  L+    P ++  N +IN   K G + +
Sbjct: 410 LDRTRIYNIYLRALCLINNNPTELLNIL--VSMLQNQCQPDVITLNTVINGFRKMGRMDE 467

Query: 190 AEKCIRGMEESGVS-PNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSI 14
           A K +  M     S PN +++TT+I G  + G+  EA  + +++        P  VTY+ 
Sbjct: 468 ALKVLSDMTNGKFSAPNEVTFTTVICGLLDVGRTVEALDVLNRIMPERG-LRPGVVTYNA 526

Query: 13  VALG 2
           V  G
Sbjct: 527 VLCG 530



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC  G    A +++  +RK    P ++  +S++H LC+    + A++     +   +
Sbjct: 315 IDSLCRAGRNHGASRVVYMMRKKDFVPSSVSYNSIIHGLCKEGGCMRAYQLFEEGIEFGY 374

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCK-KGMIIQ 191
           +P E T  +++  L       +  Q +  +++ K      +  YN  + +LC       +
Sbjct: 375 LPSEHTYKILVEGLCRESDFHKARQVLQFMLNKKGLDRTRI--YNIYLRALCLINNNPTE 432

Query: 190 AEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
               +  M ++   P+VI+  T+I+G+ + G+ +EA ++   M   G    PN VT++ V
Sbjct: 433 LLNILVSMLQNQCQPDVITLNTVINGFRKMGRMDEALKVLSDM-TNGKFSAPNEVTFTTV 491

Query: 10  ALG 2
             G
Sbjct: 492 ICG 494


>ref|NP_188429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274006|sp|Q9LSK8.1|PP240_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g18020 gi|11994208|dbj|BAB01330.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642514|gb|AEE76035.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 688

 Score =  147 bits (372), Expect = 2e-33
 Identities = 79/185 (42%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
 Frame = -3

Query: 553 RDIHTLC-IRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALT 377
           R IH++C +R +  +A+++L  L   G+ PD+L  SS++H+LC A R  EAHR     L 
Sbjct: 59  RRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLA 118

Query: 376 PNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
             ++PDERTCNVII++L+ ++SP  TL  I+ +I  K  F PSL NYN+L+N LC    +
Sbjct: 119 SGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRV 178

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
           I A K +  M   G  P+V+++TTLI GYCE  +   A ++FD+M   G    PNS+T S
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG--IRPNSLTLS 236

Query: 16  IVALG 2
           ++  G
Sbjct: 237 VLIGG 241


>ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Fragaria vesca subsp. vesca]
          Length = 682

 Score =  147 bits (370), Expect = 4e-33
 Identities = 78/186 (41%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           ++ IH LC R  ++ +A+ LL  L   G+ P  L  +S+VHALC + R  EAH   + ++
Sbjct: 48  TKTIHHLCTRHRNVDQALHLLDHLHLRGYRPVPLNLTSIVHALCDSHRFDEAHHRFANSI 107

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
             + VPD+RTCNVII++L+D+Q+P  TL  +  +  LKP F  SLVNYN+L++ LC    
Sbjct: 108 HSDCVPDQRTCNVIIARLLDSQTPHTTLNVLRLLSHLKPDFVASLVNYNRLMDQLCSLRR 167

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
             +A   +  M   G  PN +SYTTLI+GYC  G+ + A ++FD+MC       PNS+TY
Sbjct: 168 PSEAHTVLFDMMSRGHCPNAVSYTTLINGYCGMGELSHAHKVFDEMCE--REVAPNSMTY 225

Query: 19  SIVALG 2
           S++  G
Sbjct: 226 SVLISG 231



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC+  + ++ +  L ++ +   +PD +  + +V+  C+  R  EA + L   +T  +
Sbjct: 411 LRALCLANNTTELLNTLVSMLQTECQPDVITLNIVVNGFCKMGRVEEALKVLDDMMTGKF 470

Query: 367 -VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQ 191
             P+  T   II+ L++     E L  ++ ++  K  F P++V YN ++  L K     Q
Sbjct: 471 CAPNVVTFTTIINGLLNVGRTQEALYILHDVMPQKG-FRPNVVTYNAVLRGLFKLDQGKQ 529

Query: 190 AEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFD 68
           A +   GM   GV+ +  +YT +I G CE+ +  EA + +D
Sbjct: 530 AMEIFNGMVTEGVAASSTTYTIIIDGLCESDQLEEAKRFWD 570



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC   D+ KA ++LQ + +      T + +  + ALC A  + E    L   L    
Sbjct: 376 VEGLCQESDVDKAWQVLQYMLRKERVDKTRMYNIYLRALCLANNTTELLNTLVSMLQTEC 435

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            PD  T N++++         E L+ ++ +++ K + AP++V +  +IN L   G   +A
Sbjct: 436 QPDVITLNIVVNGFCKMGRVEEALKVLDDMMTGK-FCAPNVVTFTTIINGLLNVGRTQEA 494

Query: 187 EKCIRG-MEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
              +   M + G  PNV++Y  ++ G  +  +  +A ++F+ M   G     +S TY+I+
Sbjct: 495 LYILHDVMPQKGFRPNVVTYNAVLRGLFKLDQGKQAMEIFNGMVTEGVAA--SSTTYTII 552

Query: 10  ALG 2
             G
Sbjct: 553 IDG 555



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRS--LEAHRYLSYALTP 374
           I +LC  G    A +++  +R  G  P     + +VH L +      + A++ L   +  
Sbjct: 304 IDSLCKAGRYHGASRIVYIMRHRGFVPRVTSYNCIVHGLTKEGEGGVMRAYQLLEEGIEF 363

Query: 373 NWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMII 194
            ++P E T  V++  L       +  Q + ++  L+         YN  + +LC      
Sbjct: 364 GYLPSEYTYKVLVEGLCQESDVDKAWQVLQYM--LRKERVDKTRMYNIYLRALCLANNTT 421

Query: 193 QAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSI 14
           +    +  M ++   P+VI+   +++G+C+ G+  EA ++ D M   G  C PN VT++ 
Sbjct: 422 ELLNTLVSMLQTECQPDVITLNIVVNGFCKMGRVEEALKVLDDMMT-GKFCAPNVVTFTT 480

Query: 13  VALG 2
           +  G
Sbjct: 481 IING 484


>ref|XP_006299483.1| hypothetical protein CARUB_v10015648mg [Capsella rubella]
           gi|482568192|gb|EOA32381.1| hypothetical protein
           CARUB_v10015648mg [Capsella rubella]
          Length = 687

 Score =  146 bits (368), Expect = 7e-33
 Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
 Frame = -3

Query: 553 RDIHTLC-IRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALT 377
           R IH++C +  +  +A++++  L   G+ PD+L  SS++HALC A R  EAHR     + 
Sbjct: 66  RRIHSICAVHQNPDEALRIIDGLCLRGYRPDSLNLSSVIHALCDAGRFDEAHRRCLLFVA 125

Query: 376 PNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
             ++PDERTCNVI+++L+D+ SP  TL  I+ +I +K  F PSL NYN+LIN LC    +
Sbjct: 126 SGFIPDERTCNVIVARLLDSVSPVTTLGVIHRLIGIKREFVPSLTNYNRLINQLCLIHRV 185

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
           I A   +  M   G  PNV++YTTLI GYC   +   A ++ D+M A G    PNS+T S
Sbjct: 186 IDAHNLVFDMRNRGHLPNVVTYTTLIGGYCMIRELEVAHKVLDEMRACG--IRPNSLTMS 243

Query: 16  IVALG 2
           ++  G
Sbjct: 244 VLVGG 248


>ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [Amborella trichopoda]
           gi|548831430|gb|ERM94238.1| hypothetical protein
           AMTR_s00010p00213530 [Amborella trichopoda]
          Length = 823

 Score =  139 bits (351), Expect = 6e-31
 Identities = 73/185 (39%), Positives = 108/185 (58%)
 Frame = -3

Query: 556 SRDIHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALT 377
           S+ I  L   GDI +A+ LL   R  G  P + I  SL+ +LC + R  EAH  L +AL 
Sbjct: 54  SKTIQALFDAGDIDQALHLLDQFRLNGFRPTSPILFSLIDSLCNSHRFREAHHRLLFALH 113

Query: 376 PNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
            NW+PDER CN ++ +L +  SP +T + +  ++  KP F PSL NYN+L++  C   M 
Sbjct: 114 SNWLPDERACNSLLVRLCEASSPFDTRKIMTQMVISKPGFVPSLSNYNRLMSLFCDHRMP 173

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
            +A +    +E  G  PN +SYT LI+G+C+ G+ + A +LFD+M        PNS+TYS
Sbjct: 174 HEARELFMELERHGHCPNTVSYTALINGFCKIGEMDVAYKLFDEM--KEREIRPNSLTYS 231

Query: 16  IVALG 2
           ++  G
Sbjct: 232 VLLSG 236



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 41/182 (22%), Positives = 79/182 (43%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC   D++KA  ++  + K  +  ++ + +  + ALC      E    L   L    
Sbjct: 382 VEGLCKVKDVAKARSVVDVMLKKSNLEESRVYNIFLRALCSINNPSELLNVLVSMLQSGC 441

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            PD  T N ++    +     E ++ ++ ++       P +V +  +I  L   G   +A
Sbjct: 442 KPDVVTLNTVVHGFCEAGRVDEAMKVLDDMVKGNVC-VPDVVTFTTVICGLSDMGRTDEA 500

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
            + ++ M + G  P  ++Y  +  G C+  K +EA QLF KM  M      +  T++I+ 
Sbjct: 501 LELLQNMPKRGFEPTTVTYNAIFRGLCKFSKIDEAMQLFAKM--MREKVQADGTTFAILI 558

Query: 7   LG 2
            G
Sbjct: 559 AG 560



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
 Frame = -3

Query: 526 GDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERTC 347
           G   +A++LLQ + K G EP T+  +++   LC+  +  EA +  +  +      D  T 
Sbjct: 495 GRTDEALELLQNMPKRGFEPTTVTYNAIFRGLCKFSKIDEAMQLFAKMMREKVQADGTTF 554

Query: 346 NVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVN----YNKLINSLCKKGMIIQAEKC 179
            ++I+ L +     E  +    ++    W  PS V+    Y  ++  +CK G   +A   
Sbjct: 555 AILIAGLCNMGQIEEAKRFWEAVV----W--PSKVSDDFVYAAILKGMCKVGKFSEAINF 608

Query: 178 IRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
           +  + +SGVSP +++Y  LI+  C  G   EA +L  +M   G    P++VT+
Sbjct: 609 LYELVDSGVSPKLVAYNILINSACNLGLKREAYRLISEMRKNGLE--PDAVTW 659



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/139 (25%), Positives = 66/139 (47%)
 Frame = -3

Query: 538 LCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPD 359
           LC    I +A++L   + +   + D    + L+  LC   +  EA R+    + P+ V D
Sbjct: 526 LCKFSKIDEAMQLFAKMMREKVQADGTTFAILIAGLCNMGQIEEAKRFWEAVVWPSKVSD 585

Query: 358 ERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQAEKC 179
           +     I+  +      SE +  +  ++      +P LV YN LINS C  G+  +A + 
Sbjct: 586 DFVYAAILKGMCKVGKFSEAINFLYELVD--SGVSPKLVAYNILINSACNLGLKREAYRL 643

Query: 178 IRGMEESGVSPNVISYTTL 122
           I  M ++G+ P+ +++ TL
Sbjct: 644 ISEMRKNGLEPDAVTWRTL 662


>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 681

 Score =  137 bits (346), Expect = 2e-30
 Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           ++ IH LC +  ++ +A++LL  LR  G++   L  +S++H LC A R  EAH     ++
Sbjct: 57  TKKIHGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHEAHCRFMLSI 116

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
               VPDERTCNV+I++L+D +SP  TL+ +  +   KP F PS+VNYN+LI+  C   +
Sbjct: 117 ASRCVPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSL 176

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
              A + +  M+  G  PNV+SYT LI GYC     + A +LFD+M   G+   PNS+TY
Sbjct: 177 PNVAHRVLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKLFDEM--PGNYVEPNSLTY 234

Query: 19  SIVALG 2
           S++  G
Sbjct: 235 SVLING 240



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC       A +++  +RK G  P  L  +S++H L +    + A++ L   +   +
Sbjct: 313 IDSLCKAKRYHGASRIVYIMRKKGLNPGLLSYNSIIHGLSKEGGCMRAYQLLVEGVEFGY 372

Query: 367 VPDERTCNVIISKL---IDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
            P E T  V++  L   +DTQ   E LQ + H    K     + + YN  + ++C     
Sbjct: 373 SPSEHTYKVLLEGLCKELDTQKAKEVLQIMIH----KQGVDRTRI-YNIYLRAVCLTNNS 427

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
            +    +  M ++   P+VI+  T+I G+C+ G   EA ++ + M   G  C P+ VT++
Sbjct: 428 TELLNTLVEMLQTNCQPDVITLNTVIKGFCKVGSIEEALKVLNDMIG-GKFCTPDHVTFT 486

Query: 16  IVALG 2
            +  G
Sbjct: 487 TIIFG 491


>ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 646

 Score =  137 bits (346), Expect = 2e-30
 Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SRDIHTLCIRG-DISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYAL 380
           ++ IH LC +  ++ +A++LL  LR  G++   L  +S++H LC A R  EAH     ++
Sbjct: 24  TKKIHGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHEAHCRFMLSI 83

Query: 379 TPNWVPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGM 200
               VPDERTCNV+I++L+D +SP  TL+ +  +   KP F PS+VNYN+LI+  C   +
Sbjct: 84  ASRCVPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSL 143

Query: 199 IIQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTY 20
              A + +  M+  G  PNV+SYT LI GYC     + A +LFD+M   G+   PNS+TY
Sbjct: 144 PNVAHRVLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKLFDEM--PGNYVEPNSLTY 201

Query: 19  SIVALG 2
           S++  G
Sbjct: 202 SVLING 207



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC       A +++  +RK G  P  L  +S++H L +    + A++ L   +   +
Sbjct: 280 IDSLCKAKRYHGASRIVYIMRKKGLNPGLLSYNSIIHGLSKEGGCMRAYQLLVEGVEFGY 339

Query: 367 VPDERTCNVIISKL---IDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMI 197
            P E T  V++  L   +DTQ   E LQ + H    K     + + YN  + ++C     
Sbjct: 340 SPSEHTYKVLLEGLCKELDTQKAKEVLQIMIH----KQGVDRTRI-YNIYLRAVCLTNNS 394

Query: 196 IQAEKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYS 17
            +    +  M ++   P+VI+  T+I G+C+ G   EA ++ + M   G  C P+ VT++
Sbjct: 395 TELLNTLVEMLQTNCQPDVITLNTVIKGFCKVGSIEEALKVLNDMIG-GKFCTPDHVTFT 453

Query: 16  IVALG 2
            +  G
Sbjct: 454 TIIFG 458


>gb|EPS67329.1| hypothetical protein M569_07444 [Genlisea aurea]
          Length = 635

 Score =  127 bits (318), Expect = 4e-27
 Identities = 67/163 (41%), Positives = 96/163 (58%)
 Frame = -3

Query: 490 LRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNWVPDERTCNVIISKLIDTQS 311
           +R  G  P+ L   S++H LC A R  EAH  L   ++    PDERTCNV++++L+D   
Sbjct: 47  VRLRGFRPEALNVGSVIHGLCDAFRFAEAHDCLLRFVSSRCAPDERTCNVLLARLLDGGD 106

Query: 310 PSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQAEKCIRGMEESGVSPNVISY 131
              TL+ +N  I+ K  F PS+VNYN++++  CK G +  A   +  M   G  PNVI+Y
Sbjct: 107 AFRTLRLVNSFIAEKYQFVPSIVNYNRMLDGFCKLGQLETAHWVLYHMMMRGHCPNVITY 166

Query: 130 TTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVALG 2
           TTLISGYC  G  + A +LFD+M  M     PN++TY+ +  G
Sbjct: 167 TTLISGYCGIGDTSSAHKLFDEMSEM--EIHPNALTYTALVSG 207



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           +  LC + D+ KA +LL  + +      T I +  + ALC+ K   E    L   L    
Sbjct: 351 VEALCCQNDLPKAKQLLDVMLRREGVDRTRIYNIYLRALCRLKNPTELLNVLVSMLQSEC 410

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            PD  T N +I+ L       E LQ ++ + +L  + AP  V Y  +I  L   G++ +A
Sbjct: 411 PPDVITMNTVINGLCRIGRVEEALQVLDDM-NLGKFCAPDEVTYGTIIQGLVNGGLVNEA 469

Query: 187 EKCIRG-MEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIV 11
              +   M + G+ P V ++  +I G  + G+ NEA ++ D+M + G    P+  T++IV
Sbjct: 470 LNFLHNVMPQKGLPPQVATHNIIIGGLFKLGEVNEAMRILDRMSSAGPA--PDCRTHTIV 527

Query: 10  ALG 2
             G
Sbjct: 528 IGG 530



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 49/182 (26%), Positives = 85/182 (46%)
 Frame = -3

Query: 547 IHTLCIRGDISKAIKLLQTLRKAGHEPDTLIASSLVHALCQAKRSLEAHRYLSYALTPNW 368
           I +LC     + A +++  +++ G  P ++  +S+VH LC     L A + L  A    +
Sbjct: 281 IDSLCRFRKHNGAARIVYMMKEKGLSPSSVSCNSIVHGLCNDGDPLRAFQVLEEATEIGF 340

Query: 367 VPDERTCNVIISKLIDTQSPSETLQTINHIISLKPWFAPSLVNYNKLINSLCKKGMIIQA 188
            P E T NV++  L       +  Q ++  + L+         YN  + +LC+     + 
Sbjct: 341 FPSEYTYNVLVEALCCQNDLPKAKQLLD--VMLRREGVDRTRIYNIYLRALCRLKNPTEL 398

Query: 187 EKCIRGMEESGVSPNVISYTTLISGYCENGKFNEACQLFDKMCAMGSPCFPNSVTYSIVA 8
              +  M +S   P+VI+  T+I+G C  G+  EA Q+ D M  +G  C P+ VTY  + 
Sbjct: 399 LNVLVSMLQSECPPDVITMNTVINGLCRIGRVEEALQVLDDM-NLGKFCAPDEVTYGTII 457

Query: 7   LG 2
            G
Sbjct: 458 QG 459