BLASTX nr result
ID: Ephedra28_contig00028171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028171
(930 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26533.1| unknown [Picea sitchensis] 103 9e-20
ref|XP_002977839.1| hypothetical protein SELMODRAFT_176439 [Sela... 78 4e-12
ref|XP_002979488.1| hypothetical protein SELMODRAFT_419232 [Sela... 78 4e-12
ref|XP_006425831.1| hypothetical protein CICLE_v10026010mg [Citr... 75 3e-11
ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226... 75 3e-11
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni... 75 3e-11
gb|EXB63556.1| Upstream activation factor subunit spp27 [Morus n... 73 1e-10
ref|XP_003558998.1| PREDICTED: upstream activation factor subuni... 73 1e-10
ref|XP_003558997.1| PREDICTED: upstream activation factor subuni... 73 1e-10
ref|XP_003517282.1| PREDICTED: upstream activation factor subuni... 73 2e-10
ref|XP_003537360.1| PREDICTED: upstream activation factor subuni... 72 2e-10
gb|EOX91317.1| SWIB complex BAF60b domain-containing protein, pu... 72 3e-10
dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana] 72 4e-10
ref|XP_004511971.1| PREDICTED: upstream activation factor subuni... 71 5e-10
ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [... 71 5e-10
ref|XP_002985006.1| hypothetical protein SELMODRAFT_121478 [Sela... 71 5e-10
ref|XP_002986194.1| hypothetical protein SELMODRAFT_123621 [Sela... 71 5e-10
ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [S... 71 5e-10
gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays] 71 7e-10
ref|XP_003611801.1| Upstream activation factor subunit spp27 [Me... 71 7e-10
>gb|ABK26533.1| unknown [Picea sitchensis]
Length = 299
Score = 103 bits (257), Expect = 9e-20
Identities = 49/74 (66%), Positives = 61/74 (82%)
Frame = +3
Query: 378 STVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQ 557
S VPISDSLA FLGTD+I +EV+K+L DYIKE +LQDP ++G+I+CD KLQKLFSC+
Sbjct: 222 SPVPISDSLALFLGTDKIETSHEEVVKRLSDYIKENELQDPLDKGKIICDAKLQKLFSCE 281
Query: 558 NFIYSDMAKLLAPH 599
NF+ +M KLLAPH
Sbjct: 282 NFVDFEMTKLLAPH 295
>ref|XP_002977839.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
gi|300154542|gb|EFJ21177.1| hypothetical protein
SELMODRAFT_176439 [Selaginella moellendorffii]
Length = 342
Score = 78.2 bits (191), Expect = 4e-12
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3
Query: 387 PISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFI 566
PISD+L F GT E + EV+K++ DYI+ LQDPT++ +I+CD+KLQ+LF C +F+
Sbjct: 267 PISDALQKFFGTGESEVTRSEVVKRIWDYIRSNQLQDPTDKKKILCDNKLQELFECDSFL 326
Query: 567 YSDMAKLLAPH 599
M KLLA H
Sbjct: 327 GFTMPKLLASH 337
>ref|XP_002979488.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
gi|300152736|gb|EFJ19377.1| hypothetical protein
SELMODRAFT_419232 [Selaginella moellendorffii]
Length = 320
Score = 78.2 bits (191), Expect = 4e-12
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3
Query: 387 PISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFI 566
PISD+L F GT E + EV+K++ DYI+ LQDPT++ +I+CD+KLQ+LF C +F+
Sbjct: 245 PISDALQKFFGTGESEVTRSEVVKRIWDYIRSNQLQDPTDKKKILCDNKLQELFECDSFL 304
Query: 567 YSDMAKLLAPH 599
M KLLA H
Sbjct: 305 GFTMPKLLASH 315
>ref|XP_006425831.1| hypothetical protein CICLE_v10026010mg [Citrus clementina]
gi|568824530|ref|XP_006466650.1| PREDICTED: upstream
activation factor subunit spp27-like [Citrus sinensis]
gi|557527821|gb|ESR39071.1| hypothetical protein
CICLE_v10026010mg [Citrus clementina]
Length = 338
Score = 75.5 bits (184), Expect = 3e-11
Identities = 35/76 (46%), Positives = 54/76 (71%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + + +S +L FLGT E +P +V+K++ DYIKEK+LQDP+++ RI+CD+KL++LF
Sbjct: 259 FLAPLQLSGALIKFLGTGESALPRSDVIKRMWDYIKEKNLQDPSDKRRIICDEKLKELFD 318
Query: 552 CQNFIYSDMAKLLAPH 599
+ F + KLLA H
Sbjct: 319 VETFNGFTVTKLLAVH 334
Score = 58.5 bits (140), Expect = 3e-06
Identities = 31/77 (40%), Positives = 41/77 (53%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F +S L F+G E+ EV+KQL YI+EKDLQDP IVCD++L+ LF
Sbjct: 140 FSKLCALSPQLQEFIGVTELART--EVVKQLWAYIREKDLQDPNNRRNIVCDERLRALFG 197
Query: 552 CQNFIYSDMAKLLAPHL 602
M K L+ H+
Sbjct: 198 VDTINMFQMNKALSKHI 214
>ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
sativus]
Length = 225
Score = 75.5 bits (184), Expect = 3e-11
Identities = 33/76 (43%), Positives = 57/76 (75%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + +P+S++L +FLGT E +P +V+K++ DYIK+ +LQDP+++ RI+CD++L++LF
Sbjct: 144 FLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFD 203
Query: 552 CQNFIYSDMAKLLAPH 599
+F ++KLLA H
Sbjct: 204 VDSFNGFTVSKLLATH 219
>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 75.5 bits (184), Expect = 3e-11
Identities = 33/76 (43%), Positives = 57/76 (75%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + +P+S++L +FLGT E +P +V+K++ DYIK+ +LQDP+++ RI+CD++L++LF
Sbjct: 251 FLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFD 310
Query: 552 CQNFIYSDMAKLLAPH 599
+F ++KLLA H
Sbjct: 311 VDSFNGFTVSKLLATH 326
>gb|EXB63556.1| Upstream activation factor subunit spp27 [Morus notabilis]
Length = 463
Score = 73.2 bits (178), Expect = 1e-10
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + +P+SD+L F+GT E + +V+K++ YIK+ DLQDP+++ RI+CDDKL++LF
Sbjct: 383 FTAPLPLSDALVKFIGTGENTLSRADVVKRMWQYIKQNDLQDPSDKRRILCDDKLKELFD 442
Query: 552 CQNFIYSDMAKLLAPH 599
+F + KLL H
Sbjct: 443 VDSFNGFSVTKLLTAH 458
Score = 57.0 bits (136), Expect = 1e-05
Identities = 33/89 (37%), Positives = 44/89 (49%)
Frame = +3
Query: 336 VDSDAPSDSFMLFDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGR 515
VD D F +S L +F+G E+ EV+K+L YIKE DLQDP +
Sbjct: 244 VDKDVKKRGGGGFAKVCSLSPQLQAFIGEAELART--EVVKKLWSYIKENDLQDPKNKQN 301
Query: 516 IVCDDKLQKLFSCQNFIYSDMAKLLAPHL 602
I+CD+ L+ LF M K LA H+
Sbjct: 302 IICDESLRALFHVDRINMFQMNKALAKHI 330
>ref|XP_003558998.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Brachypodium distachyon]
Length = 328
Score = 73.2 bits (178), Expect = 1e-10
Identities = 32/78 (41%), Positives = 55/78 (70%)
Frame = +3
Query: 375 DSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSC 554
++ + +SD LA+F+GT E + +V+K + DYIKE +LQDP++ +I+CD+KL+ LF
Sbjct: 249 NAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKENNLQDPSDRRKIICDEKLKNLFQV 308
Query: 555 QNFIYSDMAKLLAPHLSR 608
+F ++KLL+PH ++
Sbjct: 309 DSFTGFTVSKLLSPHFTK 326
>ref|XP_003558997.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Brachypodium distachyon]
Length = 334
Score = 73.2 bits (178), Expect = 1e-10
Identities = 32/78 (41%), Positives = 55/78 (70%)
Frame = +3
Query: 375 DSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSC 554
++ + +SD LA+F+GT E + +V+K + DYIKE +LQDP++ +I+CD+KL+ LF
Sbjct: 255 NAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKENNLQDPSDRRKIICDEKLKNLFQV 314
Query: 555 QNFIYSDMAKLLAPHLSR 608
+F ++KLL+PH ++
Sbjct: 315 DSFTGFTVSKLLSPHFTK 332
>ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 72.8 bits (177), Expect = 2e-10
Identities = 33/76 (43%), Positives = 54/76 (71%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + + +SD+L +FLGT E + +V+K++ DYIK +LQDP+++ +I+CD+KL++LF
Sbjct: 256 FLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFD 315
Query: 552 CQNFIYSDMAKLLAPH 599
+F + KLLAPH
Sbjct: 316 VDSFTGFTVTKLLAPH 331
>ref|XP_003537360.1| PREDICTED: upstream activation factor subunit spp27-like [Glycine
max]
Length = 346
Score = 72.4 bits (176), Expect = 2e-10
Identities = 33/76 (43%), Positives = 53/76 (69%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + + +SD+L +FLGT E + +V+K++ DYIK +LQDP+++ +I+CD+KL++LF
Sbjct: 265 FLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFD 324
Query: 552 CQNFIYSDMAKLLAPH 599
F + KLLAPH
Sbjct: 325 VDTFTGFTVTKLLAPH 340
>gb|EOX91317.1| SWIB complex BAF60b domain-containing protein, putative isoform 1
[Theobroma cacao]
Length = 322
Score = 72.0 bits (175), Expect = 3e-10
Identities = 32/76 (42%), Positives = 54/76 (71%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + + +SD+L FLGT E + +V+K++ DYIKE +LQDP+++ +++CD+KL++LF
Sbjct: 243 FLAPLQLSDALVKFLGTGESVLTRADVIKRMWDYIKENNLQDPSDKRKVICDEKLKELFE 302
Query: 552 CQNFIYSDMAKLLAPH 599
+ F ++KLLA H
Sbjct: 303 VETFTGFTVSKLLAAH 318
>dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 71.6 bits (174), Expect = 4e-10
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = +3
Query: 252 PVADSVGQTSSSLRVCNSVVQTPDLLSVVDSDAPSDSFMLFDSTV----PISDSLASFLG 419
P+ D+ G++ SS N Q + DS+ P++ V P+SD+L FLG
Sbjct: 328 PLEDNAGESVSSKSPKNGK-QKMESDGDTDSEEPNEKDKKQKKEVLAPLPLSDALVKFLG 386
Query: 420 TDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFIYSDMAKLLAPH 599
E + +V+K+L +YI DLQDP+++ R++CD+KL++LF +F + ++KLL H
Sbjct: 387 DGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFEDTSVSKLLTNH 446
>ref|XP_004511971.1| PREDICTED: upstream activation factor subunit spp27-like [Cicer
arietinum]
Length = 352
Score = 71.2 bits (173), Expect = 5e-10
Identities = 32/76 (42%), Positives = 53/76 (69%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + + +SD+L FLGT E + +V+K++ DYIK +LQDP+++ ++CD+KL++LF
Sbjct: 271 FLAPLQLSDALVKFLGTGESELSRSDVIKRMWDYIKGNNLQDPSDKRNVLCDEKLKELFD 330
Query: 552 CQNFIYSDMAKLLAPH 599
+F ++KLLAPH
Sbjct: 331 IDSFTGFTVSKLLAPH 346
>ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana] gi|332642670|gb|AEE76191.1| SWIB complex
BAF60b domain-containing protein [Arabidopsis thaliana]
Length = 462
Score = 71.2 bits (173), Expect = 5e-10
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +3
Query: 252 PVADSVGQTSSSLRVCNSVVQTPDLLSVVDSDAPSDSFMLFDSTV----PISDSLASFLG 419
P+ D+ G++ SS N + + S DS+ P++ V P+SD+L FLG
Sbjct: 340 PLEDNAGESVSSKSPKNGKQK---MESDGDSEEPNEKDKKQKKEVLAPLPLSDALVKFLG 396
Query: 420 TDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFIYSDMAKLLAPH 599
E + +V+K+L +YI DLQDP+++ R++CD+KL++LF +F + ++KLL H
Sbjct: 397 DGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFEDTSVSKLLTNH 456
>ref|XP_002985006.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
gi|300147216|gb|EFJ13881.1| hypothetical protein
SELMODRAFT_121478 [Selaginella moellendorffii]
Length = 311
Score = 71.2 bits (173), Expect = 5e-10
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +3
Query: 381 TVP--ISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSC 554
TVP IS L FLGT+E + EV KQL DYIK LQDP++ +I+CD+KL+KL C
Sbjct: 230 TVPMKISPKLREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDC 289
Query: 555 QNFI-YSDMAKLLAPHLS 605
++F + + KLL HL+
Sbjct: 290 KSFNGFGGLPKLLQAHLT 307
>ref|XP_002986194.1| hypothetical protein SELMODRAFT_123621 [Selaginella moellendorffii]
gi|300146053|gb|EFJ12725.1| hypothetical protein
SELMODRAFT_123621 [Selaginella moellendorffii]
Length = 93
Score = 71.2 bits (173), Expect = 5e-10
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +3
Query: 381 TVP--ISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSC 554
TVP IS L FLGT+E + EV KQL DYIK LQDP++ +I+CD+KL+KL C
Sbjct: 12 TVPMKISPKLREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDC 71
Query: 555 QNFI-YSDMAKLLAPHLS 605
++F + + KLL HL+
Sbjct: 72 KSFNGFGGLPKLLQAHLT 89
>ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
gi|241920255|gb|EER93399.1| hypothetical protein
SORBIDRAFT_01g007140 [Sorghum bicolor]
Length = 326
Score = 71.2 bits (173), Expect = 5e-10
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +3
Query: 390 ISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFIY 569
+SD L F+GT E + +V+K++ DYIKE +LQDP++ +I+CD+KL+ L + F
Sbjct: 252 LSDDLVKFIGTGESMLSRSDVVKKMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTG 311
Query: 570 SDMAKLLAPHLSR 608
++KLLAPH ++
Sbjct: 312 FTVSKLLAPHFTK 324
>gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays]
Length = 316
Score = 70.9 bits (172), Expect = 7e-10
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +3
Query: 390 ISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFIY 569
+SD L F+GT E + +V+K++ DYIKE +LQDP++ +I+CD+KL+ L + F
Sbjct: 242 LSDDLMKFIGTGESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTG 301
Query: 570 SDMAKLLAPHLSR 608
++KLLAPH ++
Sbjct: 302 FTVSKLLAPHFTK 314
>ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor
subunit spp27 [Medicago truncatula]
Length = 361
Score = 70.9 bits (172), Expect = 7e-10
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 372 FDSTVPISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFS 551
F + + +SD+LA FLG E+ +V+K++ DYIK +LQDP+++ +I+CD+KL++LF
Sbjct: 265 FLAPLQLSDALAKFLGESELSR--SDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKELFD 322
Query: 552 CQNFIYSDMAKLLAPHLSR*YLIAQVGEA 638
+F+ + KLLAPH + + + EA
Sbjct: 323 VDSFVGFTVTKLLAPHFIKAEQLGKENEA 351
Score = 57.8 bits (138), Expect = 6e-06
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = +3
Query: 390 ISDSLASFLGTDEIGMPLKEVLKQLCDYIKEKDLQDPTEEGRIVCDDKLQKLFSCQNFIY 569
+S L F+G E M EV+KQL YI+EKDLQDP I+CD+ L+ LF
Sbjct: 138 LSPQLQEFVGAPE--MARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALFGVDTINM 195
Query: 570 SDMAKLLAPHL 602
M K+LA H+
Sbjct: 196 FQMNKVLAKHI 206