BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00028157
         (1258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A...   350   5e-94
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]       339   2e-90
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   337   8e-90
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   332   2e-88
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]               327   8e-87
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li...   327   8e-87
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li...   326   1e-86
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr...   326   1e-86
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li...   322   2e-85
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]    322   3e-85
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei...   321   5e-85
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li...   317   5e-84
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   315   3e-83
ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li...   313   7e-83
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S...   313   1e-82
ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-li...   307   7e-81
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe...   307   7e-81
ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-li...   307   7e-81
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li...   305   3e-80
ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li...   303   7e-80

>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
            gi|548862999|gb|ERN20355.1| hypothetical protein
            AMTR_s00066p00201540 [Amborella trichopoda]
          Length = 628

 Score =  350 bits (899), Expect = 5e-94
 Identities = 180/394 (45%), Positives = 263/394 (66%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            ME++IK+EF++N FS E E+E+L KC +FCINY L PSDLV+SW +YYLN+QLDG KVQ+
Sbjct: 1    MEQEIKSEFIENNFSLEDEDEILNKCVAFCINYKLSPSDLVSSWVVYYLNMQLDGSKVQN 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
            + +DGFLHHLQN+QK  +  EE + H YSSNDV++LL  E+ + E+ +  TP+KQS   +
Sbjct: 61   AHVDGFLHHLQNKQKHNILKEESNVHMYSSNDVNMLLGEEHKDGEEGMLDTPIKQSYFDN 120

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRDVLD 690
            L + S  +S+  +++P ++                  +TPF  R+++F++Q   N     
Sbjct: 121  LNDLSTPISM--DRSPERNG---KSISEKSSRRTSSQATPFGQRTNKFLLQLSFNSHSKA 175

Query: 689  SIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKNFA 510
               K+       D+++R+V  I  CSL+V G  P  GFR+M   +ED+F +LE RI+  +
Sbjct: 176  DDTKDLEIDALGDDVIRRVQDIESCSLQVQGSWPKPGFRFMYDKVEDRFNALENRIRRLS 235

Query: 509  TALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRLDL 330
            +AL A+  C       LASQ+++  VG++CCDGEGRLND+S+L +GS E SGG RVRLDL
Sbjct: 236  SALVASGECGEPSDATLASQKTLFSVGMVCCDGEGRLNDKSILFQGSVEHSGGQRVRLDL 295

Query: 329  QKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDPKS 150
            + L+++S+FPGQVIG+EGHN SGHC +AS+++DS+P+   S +D    P AK+   D   
Sbjct: 296  KNLVQFSLFPGQVIGIEGHNPSGHCFIASKLVDSFPLIGSSDLD---LPPAKKQATDQNG 352

Query: 149  QINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
            +  A+K  R  +S++IAAGP +TTDNL F+PL +
Sbjct: 353  E-PATKASR-ELSIVIAAGPLSTTDNLLFEPLTE 384


>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
          Length = 670

 Score =  339 bits (869), Expect = 2e-90
 Identities = 178/393 (45%), Positives = 255/393 (64%), Gaps = 1/393 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            ME++IKAEF + GF+ + EEE+LKKC +FCINY+L+P D+V+SWE+YYLN QL+G  VQ+
Sbjct: 1    MEDEIKAEFSKVGFALDDEEEILKKCLTFCINYNLKPCDIVSSWEVYYLNRQLNGSTVQN 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
            ++MDGFL HLQ+EQKE +  EEP  H YSS DVD++LN E+ +E++ +  TP +      
Sbjct: 61   AEMDGFLLHLQDEQKEAIIKEEPGLHIYSSKDVDMILNDEDGDEKEEVPGTPTR------ 114

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNR-DVL 693
              N+ D  S   + TP  +                   TPF  R+ +FVV+F +N    +
Sbjct: 115  --NSQDSYSEQFDSTPQTNG------KIFSSGKPSKLITPFGQRTQKFVVKFSINSMPNM 166

Query: 692  DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKNF 513
            ++ E E     +ED+++RK+    RCSL V G  P TG R+M   IED+F +LE RI+ +
Sbjct: 167  ENGETELDPENNEDDVIRKIQPGRRCSLIVHGSKPGTGCRFMYDRIEDRFNALESRIRKY 226

Query: 512  ATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRLD 333
            A A  +++         ++SQ+SI  VG+ICCDGEG LN++S LL+ S E SGG RVRL+
Sbjct: 227  AVAFTSSKLYEEPVDPTVSSQKSIFTVGMICCDGEGHLNEKSTLLQSSVEHSGGQRVRLE 286

Query: 332  LQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDPK 153
            LQ L ++S+FPGQV+G+EGHN SGHCL+AS+ +DS P+   S M D      K+  ++ +
Sbjct: 287  LQNLNQFSIFPGQVVGIEGHNPSGHCLIASKFVDSIPL---SDMADVDLHPTKKQALEKE 343

Query: 152  SQINASKTPRGNISMLIAAGPFTTTDNLAFQPL 54
             Q N     +  +S++IA+GPFTTTDNL+F+PL
Sbjct: 344  IQSNGLSGLQAELSVIIASGPFTTTDNLSFEPL 376


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
            gi|297738371|emb|CBI27572.3| unnamed protein product
            [Vitis vinifera]
          Length = 623

 Score =  337 bits (863), Expect = 8e-90
 Identities = 188/397 (47%), Positives = 250/397 (62%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSF--EGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKV 1056
            MEE+I  EF + GFSF  E EEEVLKKC +FCINY L PSDLV+SWE+YYLN QLD   V
Sbjct: 1    MEEEIMLEFKKIGFSFHKEEEEEVLKKCLTFCINYKLSPSDLVSSWEVYYLNRQLDESVV 60

Query: 1055 QSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNG 876
             ++ MDGFL HLQNEQKE +  EEP  H YSSNDVD++L+ E++  ++ +  TP  +S  
Sbjct: 61   GNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDEHEEIKEDILGTPSDRSGR 120

Query: 875  FSLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRDV 696
                +A  F S  A +T G    +                TPF  R+S+FVVQ  +N   
Sbjct: 121  ---HHADPFDS--AQRTNGNSSSYGKPSNHV---------TPFGKRTSKFVVQLTVNNPP 166

Query: 695  -LDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIK 519
              ++ + E      +D+++R+V    RCSL V G  P  G R+M   IED+F SLE RIK
Sbjct: 167  SAENGKNENKFENVDDDIIRRVQPSKRCSLLVHGSRPGPGCRFMYDRIEDRFNSLENRIK 226

Query: 518  NFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVR 339
               TAL A           +ASQ+S+   G+ICCDGEGRLN++S+LL+ S + SGG RVR
Sbjct: 227  KHTTALVATGLYKEPTDPTVASQKSVFATGMICCDGEGRLNEKSILLQSSVQHSGGQRVR 286

Query: 338  LDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITID 159
            LDL KL ++S+FPGQV+G+EGHN SGHCL+AS+++DS P+S P+ +D      AK+   D
Sbjct: 287  LDLSKLNQFSIFPGQVVGIEGHNPSGHCLIASKILDSIPVSAPTDVD---LHPAKKQARD 343

Query: 158  PKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             + Q   S      +S+++AAGPFTTTDNL F+PL +
Sbjct: 344  EEFQSADSSHKLAELSLMVAAGPFTTTDNLLFEPLTE 380


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
            gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
            putative [Ricinus communis]
          Length = 621

 Score =  332 bits (851), Expect = 2e-88
 Identities = 180/396 (45%), Positives = 252/396 (63%), Gaps = 2/396 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEE-VLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQ 1053
            MEE+IKAEF ++GF+ + EEE +LKKC +FCINY+L+P+DLV+SWE+YYLN QLD   VQ
Sbjct: 1    MEEEIKAEFNKSGFTLDHEEEQILKKCLTFCINYNLKPADLVSSWEVYYLNRQLDESTVQ 60

Query: 1052 SSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGF 873
            + +MDGFL HLQNEQKE +  EEPD H YSS DVD++LN E ++ ++ +  TP  +S   
Sbjct: 61   NGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDEGEDLKEEVPGTPTDESQKL 120

Query: 872  SLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNR-DV 696
               N+  F SI+ +   G   G                 TPF  R+ +FVV+F +N    
Sbjct: 121  ---NSEPFDSIIKSTGNGYSSGKRSKHV-----------TPFGRRTDKFVVKFNINNLPD 166

Query: 695  LDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKN 516
             ++ + E      ED+++++V    +CS  V G  P  G R+M   IED+F +L+ RI+ 
Sbjct: 167  TENGDNEHVRENMEDDIIKRVQPRKKCSFVVHGSGPEPGCRFMYDRIEDRFNALDNRIRK 226

Query: 515  FATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRL 336
             A AL A+          +ASQ ++  VG+ICCDGEGRLN++SVLL+ S E SGG RV L
Sbjct: 227  HAAALVASGLYEEPTDPTVASQRNVFAVGMICCDGEGRLNEKSVLLQSSIEHSGGQRVHL 286

Query: 335  DLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDP 156
            DL  L ++S+FPGQ++ +EGHN SGHCLVAS+++DS P+S      D + P AK+  +D 
Sbjct: 287  DLHNLSQFSIFPGQIVAIEGHNPSGHCLVASKLVDSIPLSA---APDGNLPPAKKQALDQ 343

Query: 155  KSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
            + +   S   +  IS+LIA+GPFTT DNL F+PL +
Sbjct: 344  EIESIGSSCTQ-EISVLIASGPFTTLDNLMFEPLTE 378


>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
          Length = 621

 Score =  327 bits (837), Expect = 8e-87
 Identities = 178/396 (44%), Positives = 248/396 (62%), Gaps = 2/396 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IKAEF++NGF+ + EEE+LKKC  FC+N+SL+PSDLV+SWE+YYLN QLD   V+ 
Sbjct: 1    MEEEIKAEFLKNGFTLDEEEEILKKCHMFCLNFSLKPSDLVSSWEVYYLNRQLDESVVKD 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
            ++MDGF  HLQNEQ E +  +EPD + YS  DVD++L+ E+++ ++V+  TP  +S    
Sbjct: 61   AEMDGFSGHLQNEQVEAVVKKEPDLYMYSFKDVDMILDAEDEDTKEVILRTPTDKSEKLH 120

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVL-NRDVL 693
                SD            D                   TPF  RS++FVV+F + N    
Sbjct: 121  ----SDLY----------DSAQKTNSNIYSSRRTPKQVTPFGTRSNKFVVKFNIDNLPTS 166

Query: 692  DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKNF 513
            +++         ED +++++    RCSL V    P  G R+M   IED F +LE RI+  
Sbjct: 167  ETVNGMHDHENLEDAVIKRIQPQKRCSLVVHSSGPEPGCRFMYDRIEDGFNALENRIRKH 226

Query: 512  ATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRLD 333
            A AL A+         ++ASQ SI  VG+I CD EG LND+S+LL+ S E SGG RVRL+
Sbjct: 227  AAALVASGLYQEPMDPSVASQRSIFAVGMIFCDDEGHLNDKSILLQSSVEHSGGQRVRLE 286

Query: 332  LQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDPK 153
            L KL  +S+FPGQV+G+EGHN SGHCL+AS ++DS P+++ +   D + P AKR  ++ +
Sbjct: 287  LNKLSHFSIFPGQVVGIEGHNPSGHCLIASEIVDSVPLTIAA---DTNLPPAKRQALNEE 343

Query: 152  SQ-INASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             Q  N S TP   IS++IAAGPFTTTDNL F+PL++
Sbjct: 344  IQATNLSSTPT-EISLIIAAGPFTTTDNLLFEPLKE 378


>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
            gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
            polymerase alpha subunit B-like [Cucumis sativus]
          Length = 622

 Score =  327 bits (837), Expect = 8e-87
 Identities = 188/404 (46%), Positives = 258/404 (63%), Gaps = 10/404 (2%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+I  EF ++GF+F+ EEE+LKKC +FC+NY+L+PSD+V+SWE+YYLN  LDG  V+ 
Sbjct: 1    MEEEIGEEFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVEL 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPEN-DNEEDVLQHTPVKQSNGF 873
             Q+DGFL HLQNEQKE +   EPD H YSS DVD++LN EN D  ED+L     K  NG 
Sbjct: 61   EQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDIL-----KTPNGK 115

Query: 872  SLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNR--D 699
            S     + L +    TP  ++G                 TPF  R+ +FVV+F +N   D
Sbjct: 116  SQSLHKERLDL----TPYTNEG------LFSSGKPSKHETPFGQRTEKFVVRFNINNMPD 165

Query: 698  VLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGF------RYMNASIEDKFLS 537
            ++ +++ +  E   ED +++KV  +  CSL V G    +GF      R+M    ED+F +
Sbjct: 166  MVTAVKVDNSE-NDEDTIIKKVRPLQGCSLTVHG----SGFGLEPNCRFMYDKDEDRFNA 220

Query: 536  LEKRIKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFS 357
            L+ RI   A ALAA+          +ASQ+SI  VG+I CDGEG LND+S+LL+ S   S
Sbjct: 221  LDNRIMRHAKALAASGLYEEAVDPTVASQKSIFAVGMIYCDGEGHLNDKSILLQSSIAHS 280

Query: 356  GGHRVRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 177
            GG RVRL+LQ L ++S+FPGQV+G+EGHN SGHCL+AS+++DS+P+S      D   P A
Sbjct: 281  GGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATI---DPILPPA 337

Query: 176  KRITIDPKSQ-INASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
            K+I ++   Q IN S TP   +SM+IA+GP+TTTDNL F+PL +
Sbjct: 338  KKIALNHDIQPINQSSTP-SELSMIIASGPYTTTDNLLFEPLTE 380


>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
          Length = 620

 Score =  326 bits (835), Expect = 1e-86
 Identities = 180/397 (45%), Positives = 251/397 (63%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IKAEF +NGF+F  E EVLKKC +FCINY+L+PSDLV+SWE+YYLN QLD   V+ 
Sbjct: 1    MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
             +MDGF+ HLQNEQKE +  EEP  H YSS DVD++LN E++N  + +  TP       +
Sbjct: 61   DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGTPTD-----N 115

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRDVLD 690
            L+  SD L          D  +               +TPF  R+ + VV+F +N   L 
Sbjct: 116  LKLYSDAL----------DSTYKANANGYSSDKPSKLATPFGRRTEKLVVKFNINN--LP 163

Query: 689  SIEK---ERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIK 519
            + E    E  +  +ED+++++V +  +CSL V G  P  G R+M    ED+F +LE RI+
Sbjct: 164  NTENGCIEHDDENTEDDIIKRVKTGEKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIR 223

Query: 518  NFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVR 339
              A AL ++          +ASQ ++  VG+ICCDG+G LND+SVLL+ S E SGG RVR
Sbjct: 224  KHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR 283

Query: 338  LDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITID 159
            LDL KL ++S+FPGQV+G+EG N SGHCL+AS+++D  P+ V + + D H  + + +  +
Sbjct: 284  LDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV-DVHPSMKQALDQE 342

Query: 158  PKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
              S +  S+     ISM+IAAGPFTTTDNL F+PL++
Sbjct: 343  IHSTVVISRPE--EISMIIAAGPFTTTDNLYFEPLKE 377


>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
            gi|557540306|gb|ESR51350.1| hypothetical protein
            CICLE_v10030973mg [Citrus clementina]
          Length = 620

 Score =  326 bits (835), Expect = 1e-86
 Identities = 180/397 (45%), Positives = 251/397 (63%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IKAEF +NGF+F  E EVLKKC +FCINY+L+PSDLV+SWE+YYLN QLD   V+ 
Sbjct: 1    MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
             +MDGF+ HLQNEQKE +  EEP  H YSS DVD++LN E++N  + +  TP       +
Sbjct: 61   DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGTPTD-----N 115

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRDVLD 690
            L+  SD L          D  +               +TPF  R+ + VV+F +N   L 
Sbjct: 116  LKLYSDAL----------DSTYKANANGYSSDKPSKLATPFGRRTEKLVVKFNINN--LP 163

Query: 689  SIEK---ERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIK 519
            + E    E  +  +ED+++++V +  +CSL V G  P  G R+M    ED+F +LE RI+
Sbjct: 164  NTENGCIEHDDENTEDDIIKRVKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIR 223

Query: 518  NFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVR 339
              A AL ++          +ASQ ++  VG+ICCDG+G LND+SVLL+ S E SGG RVR
Sbjct: 224  KHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR 283

Query: 338  LDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITID 159
            LDL KL ++S+FPGQV+G+EG N SGHCL+AS+++D  P+ V + + D H  + + +  +
Sbjct: 284  LDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV-DVHPSMKQALDQE 342

Query: 158  PKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
              S +  S+     ISM+IAAGPFTTTDNL F+PL++
Sbjct: 343  IHSTVVISRPE--EISMIIAAGPFTTTDNLYFEPLKE 377


>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca subsp.
            vesca]
          Length = 620

 Score =  322 bits (825), Expect = 2e-85
 Identities = 175/397 (44%), Positives = 253/397 (63%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            ME++IKAEF+++ F+ + E+E+LKKC +FCINY L PSDLV+SWE+YYLN QL+   V+ 
Sbjct: 1    MEDQIKAEFIKSDFTLDQEDEILKKCLTFCINYKLTPSDLVSSWEIYYLNRQLNEPVVRD 60

Query: 1049 SQMDGFLHHLQNEQKEVLKN-EEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGF 873
             +M+GFL HLQNEQKE + + EEP  H YSSNDVD++LN E+ + E+ + HTP+ +S   
Sbjct: 61   VEMEGFLQHLQNEQKEAINSKEEPGLHIYSSNDVDMILNGEDVDIEETVLHTPISKSQN- 119

Query: 872  SLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVL-NRDV 696
                 SD      + TP  +                   TPF  R+ +FVV+F + N   
Sbjct: 120  ---RYSDSF----DSTPQTNGN------VPSSGKPTKLITPFGRRTDKFVVKFSIENMPN 166

Query: 695  LDSIEKE-RGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIK 519
             ++++KE   E   +D+++R+V    RCSL V G  P    R+M   I D+F +LE RI 
Sbjct: 167  TENVKKEDENENQDDDDIIRRVKPGKRCSLVVHGSGPEIDCRFMYDRIADRFNALENRIL 226

Query: 518  NFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVR 339
              AT L ++          ++S++SI  VG+ICCDGEG LN++S LL+ SAE SGG RVR
Sbjct: 227  KHATELVSSGQYEEPVDPTVSSEKSIFTVGMICCDGEGHLNEKSTLLQSSAEHSGGQRVR 286

Query: 338  LDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITID 159
            ++L  + +YS+FPGQV+G+ GHN SGHC +AS++IDS P+S  +  +D H   AK+  +D
Sbjct: 287  VELHNVSQYSIFPGQVVGIAGHNPSGHCFIASKMIDSIPLSAAAD-EDLHP--AKKPALD 343

Query: 158  PKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
            P+S       P+  +S++IA+GPFTT DNL F+PL++
Sbjct: 344  PESLSIGLAIPQPELSVIIASGPFTTIDNLLFEPLKE 380


>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score =  322 bits (824), Expect = 3e-85
 Identities = 174/399 (43%), Positives = 245/399 (61%), Gaps = 5/399 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEG-----EEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDG 1065
            MEE+I+AEF  NGF   G       ++L    ++C+NY + P+DLV++WE+YYLN QLDG
Sbjct: 1    MEEEIRAEFQSNGFIIGGAGPADSAQILSTLLTYCVNYKMSPADLVSNWEVYYLNRQLDG 60

Query: 1064 CKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQ 885
             KV+SS +DGFL HLQNE KE L  EE D H YSSNDVD+LL+  + +EE +L     KQ
Sbjct: 61   LKVESSYLDGFLSHLQNEVKEKLIKEETDLHIYSSNDVDMLLSNTHTDEEGILDTPSTKQ 120

Query: 884  SNGFSLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLN 705
                 + +++  L+ L  + P                      TPF  R ++F   +VLN
Sbjct: 121  EKPH-VDSSNSELTPLTTERPSS---------IRAAKTNGDRITPFAQRVNKFTQHYVLN 170

Query: 704  RDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKR 525
             D + S+  +     SEDEL+R++    +C+L+V    P  G R+M   +ED+F  LE R
Sbjct: 171  ADNVASVPSKDEVETSEDELIRRIQPSQKCTLQVQRSKPEPGCRFMYDRMEDRFNYLEGR 230

Query: 524  IKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHR 345
            I   A   +A   C       LAS+E++  VG++ CDGEGRLN++S+LL+GS E S G R
Sbjct: 231  IGRSARLFSATGLCGQPADATLASEENMFAVGMVICDGEGRLNEKSILLQGSVEHSRGQR 290

Query: 344  VRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRIT 165
            VRLDL+ + ++S+FPGQV+G+EGHN SGHC VAS++IDS P+SV  Q+     P AK+  
Sbjct: 291  VRLDLKDINQFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDDQL-----PCAKKQA 345

Query: 164  IDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
            +D +   N++   R  +S +IAAGPFTTTDNL F+PL++
Sbjct: 346  VDHEGHQNSNTLSR-VLSSVIAAGPFTTTDNLLFEPLQE 383


>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
            gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
            B family protein [Populus trichocarpa]
          Length = 618

 Score =  321 bits (822), Expect = 5e-85
 Identities = 177/395 (44%), Positives = 248/395 (62%), Gaps = 1/395 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IK EF ++GFS + EEEVLKKC +FCINY+L+PSDLV+SWE+YYLN  LD   V++
Sbjct: 1    MEEEIKEEFKKSGFSLDDEEEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRLLDESTVRN 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
            ++MDGFL HLQNEQKE +  EEP+ + YSS DVD++LN +   EED+ +  P   ++   
Sbjct: 61   AEMDGFLLHLQNEQKEAVVKEEPNLYIYSSKDVDMILNYD---EEDLKEEVPGTPTDKSL 117

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNR-DVL 693
              N+  F S   +   G   G                 TPF  R+ +FVV+F +N   V+
Sbjct: 118  KLNSEPFNSPPKSYGNGYSSGKPSKLV-----------TPFGRRTDKFVVKFNINSLPVV 166

Query: 692  DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKNF 513
            ++ + E      EDE++++     RCSL V    P  G R+M   IED+F +LE RI+  
Sbjct: 167  ENNDGEHDHGNLEDEIIKRAQPCKRCSLMVHRLGPEPGCRFMYDKIEDRFNALENRIRKH 226

Query: 512  ATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRLD 333
            A AL A+          +ASQ +I  VG+ICCDGEGRLN++S++L+ S E SGG  VRL+
Sbjct: 227  AIALFASGLYEEPMDPTVASQRNIFAVGMICCDGEGRLNEKSIMLQSSVEHSGGRNVRLE 286

Query: 332  LQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDPK 153
            L  L ++S+FPGQ++G+EG N SGHCL+AS+++DS P+S    + +QH    K+  +D  
Sbjct: 287  LHNLSQFSIFPGQIVGIEGQNPSGHCLIASKLVDSVPLSATVAV-NQHP--TKKQALDLV 343

Query: 152  SQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             +   S   +  IS LIA+GPFTTTDNL F+PL +
Sbjct: 344  VESTDSSYVQKEISALIASGPFTTTDNLFFEPLTE 378


>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum lycopersicum]
          Length = 617

 Score =  317 bits (813), Expect = 5e-84
 Identities = 174/395 (44%), Positives = 241/395 (61%), Gaps = 1/395 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IKAEF++NGFSF+ E E+L KC +FCI YSL PSDLV+SW++Y LN  L    VQS
Sbjct: 1    MEEEIKAEFLKNGFSFDDETEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQ-LTVQS 59

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
            S M  FL  LQNE++E +  +EP  HFYSS D+ ++LN E +N +D++  TP  +     
Sbjct: 60   SHMGAFLQQLQNERREDIVKKEPGLHFYSS-DISMMLNDEYENTKDIILGTPTDKRKTSQ 118

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRDVL- 693
             +       + A KT G                     TPF  R ++FVVQF LN +   
Sbjct: 119  TETI-----VSARKTNGS---------ISTSRKHLETITPFGQRKNKFVVQFTLNENANG 164

Query: 692  DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKNF 513
            +S++ E  E    D+++++V  I RCSL+++   P  G R+M    E+KF  LE RIK+ 
Sbjct: 165  ESMKIENDEENPSDDIIKRVQPIKRCSLQIISSKPEPGCRFMYDRTENKFNFLESRIKDH 224

Query: 512  ATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRLD 333
             TAL A+          +ASQ S+  VG+ICC+ EGRL ++ +LL+ S E+SGG RVRLD
Sbjct: 225  TTALVASGLHEEPTDPTVASQRSVFAVGMICCEEEGRLKEKPILLQSSVEYSGGQRVRLD 284

Query: 332  LQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDPK 153
            LQ L  +SVFPGQV+GVEGHN SGHCL+AS+++D  P+S  S    ++ P  K+  +D  
Sbjct: 285  LQNLDHFSVFPGQVVGVEGHNPSGHCLIASKIVDHIPLSASS---TENLPPTKKQAMDQY 341

Query: 152  SQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             Q   +      +S++IAAGPFTT DNL F+PL +
Sbjct: 342  LQSANAVAAMPELSLIIAAGPFTTVDNLFFEPLAE 376


>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  315 bits (806), Expect = 3e-83
 Identities = 173/395 (43%), Positives = 241/395 (61%), Gaps = 1/395 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IKAEF++NGFS + E E+L KC +FCI YSL PSDLV+SW++Y LN  L    VQS
Sbjct: 1    MEEEIKAEFLKNGFSLDDEAEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQ-LTVQS 59

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNGFS 870
            S M  FL  LQNE++E +  +EP  HFYSS D+ ++LN E +N ++++  TP  +     
Sbjct: 60   SHMGAFLQQLQNERREDIVKKEPGLHFYSS-DISMMLNDEYENTKEIILGTPTDKR---- 114

Query: 869  LQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRDVL- 693
             + +     + A KT G                     TPF  R S+FVVQF LN +   
Sbjct: 115  -KTSQSETIVSARKTNGS---------ISTSRKHLETITPFGQRKSKFVVQFTLNENANG 164

Query: 692  DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIKNF 513
            +S++ E  E    D+++++V  I RCSL+++   P  G R+M    E+KF  LE RIK+ 
Sbjct: 165  ESMKIENDEENLNDDIIKRVQPIKRCSLQIISSQPEPGCRFMYDRTENKFNFLESRIKDH 224

Query: 512  ATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVRLD 333
             TAL A+          +ASQ S+  VG+ICC+ EGRL ++ +LL+ S E SGG RVRLD
Sbjct: 225  TTALVASGLHEEPTDPTVASQRSVFAVGMICCEEEGRLKEKPILLQSSVEHSGGQRVRLD 284

Query: 332  LQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITIDPK 153
            LQ L  +SVFPGQV+GVEGHN SGHCL+AS+++D  P+S  S    ++ P  K+  +D  
Sbjct: 285  LQNLDHFSVFPGQVVGVEGHNPSGHCLIASKIVDRIPLSASS---TENLPPTKKQAMDQY 341

Query: 152  SQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             Q  ++      +S++IAAGPFTT DNL F+PL +
Sbjct: 342  LQSTSAVVAMPELSLIIAAGPFTTVDNLFFEPLAE 376


>ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
            distachyon]
          Length = 625

 Score =  313 bits (803), Expect = 7e-83
 Identities = 171/401 (42%), Positives = 248/401 (61%), Gaps = 7/401 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEG-----EEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDG 1065
            MEE+I+ EF  +GFS  G       ++L    ++CINY + P+DLV++WE+YYLN QLDG
Sbjct: 1    MEEEIRTEFESSGFSIGGAGPSDSAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60

Query: 1064 CKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQ--HTPV 891
             KV+SS +DGFL HLQNE K+ L  EE D H YSSND+D+LLN     EE  L    T +
Sbjct: 61   LKVESSYLDGFLTHLQNEVKDKLIKEETDLHVYSSNDIDMLLNNALTEEEGFLDTPSTKL 120

Query: 890  KQSNGFSLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFV 711
            ++S+G   + ++  L+ L    P                      TPF  R ++F   +V
Sbjct: 121  EKSHG---EPSNSELTPLTTDRPSSSRA---------AKTNGDRITPFAQRVNKFAQHYV 168

Query: 710  LNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLE 531
            LN D + ++  +     SEDEL+R+V    RC+L+V    P  G R+M   +ED+F  LE
Sbjct: 169  LNADDMANVPSKPEVETSEDELIRRVQPRQRCTLQVQRSHPEPGCRFMYDRMEDRFNYLE 228

Query: 530  KRIKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGG 351
             RI++ A+  +A   C       LAS++++  VG++ CDGEGRLN++S+LL+GS E S G
Sbjct: 229  DRIRSSASLFSATGLCGEPADATLASEDNMFAVGMVICDGEGRLNEKSILLQGSVEHSRG 288

Query: 350  HRVRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKR 171
             RVRLDL+ + ++S+FPGQV+G+EGHN SGHC VAS++IDS P+ V  Q+     P +K+
Sbjct: 289  QRVRLDLKDINEFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVPVDDQL-----PCSKK 343

Query: 170  ITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
              +D + + N++   R  +S +IAAGP+TTTDNL F+PL++
Sbjct: 344  QALDDEGRQNSNTLSR-VLSSVIAAGPYTTTDNLLFEPLQE 383


>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
            gi|241916387|gb|EER89531.1| hypothetical protein
            SORBIDRAFT_10g009040 [Sorghum bicolor]
          Length = 626

 Score =  313 bits (801), Expect = 1e-82
 Identities = 174/401 (43%), Positives = 249/401 (62%), Gaps = 7/401 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEE-----EVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDG 1065
            MEE+I+AEF  +GFS  G       ++L    ++CINY + P+DLV++WE+YYLN QLDG
Sbjct: 1    MEEEIRAEFQNSGFSIGGASSEDAAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60

Query: 1064 CKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQH-TPVK 888
             K++SS +DGFL HLQNE KE +  EE + H YSSNDVD+LL+  N + ++V  H TP  
Sbjct: 61   LKLESSYLDGFLSHLQNEVKERIIKEEANLHIYSSNDVDMLLS--NSHADEVAFHDTPGS 118

Query: 887  QSNGFSLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVL 708
            +      ++++  L+ L +  P                      TPF  R ++F  Q+VL
Sbjct: 119  KQEKPPEESSNSELTPLTSDRPSSS---------RVAKTNADRITPFATRVNKFTQQYVL 169

Query: 707  NRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEK 528
            N D   S+  +  E  +EDE++R++    RCSL+V    P  G R+M   +ED+F  LE 
Sbjct: 170  NADNAVSVPSKNAEI-TEDEVIRRIQPSQRCSLQVQRSQPEPGCRFMYDRMEDRFNYLED 228

Query: 527  RIKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGH 348
            RI+  A+  +A+  C       LAS+E +  VG + CDGEG LN++S+LL+GS + S G 
Sbjct: 229  RIRKSASLFSASGFCGQPADATLASEEKMFAVGTVACDGEGHLNEKSILLQGSVQHSRGQ 288

Query: 347  RVRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRI 168
            RVRLDL+ L  +S+FPGQV+G+EGHN SGHC VAS++IDS P+SV +Q+     P AK+ 
Sbjct: 289  RVRLDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDAQL-----PSAKKQ 343

Query: 167  TIDPKSQINA-SKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             ID +S  N+ + T    +S +IAAGP+TTTDNL F+PL++
Sbjct: 344  AIDNESNQNSDAGTLSRALSSVIAAGPYTTTDNLLFEPLQE 384


>ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Glycine
            max]
          Length = 577

 Score =  307 bits (786), Expect = 7e-81
 Identities = 169/399 (42%), Positives = 246/399 (61%), Gaps = 7/399 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IK+EF ++GF  E E+E+L KC +FCINYSL PSDLV+SWE+YYLN QL+   VQ+
Sbjct: 1    MEEEIKSEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQN 60

Query: 1049 SQMDGFLHHLQNEQKE--VLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNG 876
            +++DGFL HLQNE+KE  + + EE   H YS  DV+++LN ++D +++    TP+     
Sbjct: 61   AEIDGFLLHLQNEKKEDVIKEKEEAGLHIYSIGDVEMILNNDDDTKDNT-PGTPINHHQD 119

Query: 875  FSLQNASD-----FLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFV 711
              L  A D     + ++L++  P K                    TPF  R+ +F V+F 
Sbjct: 120  -PLSPAPDTPSLMYENVLSSGKPSKSK----------------LVTPFSKRTDKFAVKFS 162

Query: 710  LNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLE 531
            +N   + ++E +     +ED+++R+VP   R SL + G  P  G R++    ED+  ++E
Sbjct: 163  IN--TVPNVENDE----NEDDVVRRVPLFERSSLSIHGSGPKPGCRFLYDRTEDRLNAIE 216

Query: 530  KRIKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGG 351
             R++    A  A+           ASQ SI  VG+ICCDGEGRLN++SV+L+ S E SGG
Sbjct: 217  NRLRKHTRAFVASGLHEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGG 276

Query: 350  HRVRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKR 171
              VRLDLQ+L  YS+FPGQ++G+ GHN SGHC VA++++DS P SV     D+ +  AK+
Sbjct: 277  ECVRLDLQRLSHYSIFPGQIVGIGGHNPSGHCFVATKLVDSIPTSVA----DEDSNPAKK 332

Query: 170  ITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPL 54
              +D ++Q       +  +SM+IAAGPFTTTDNL F+PL
Sbjct: 333  QAVDKENQPTDLLCKQRKLSMIIAAGPFTTTDNLLFEPL 371


>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
          Length = 612

 Score =  307 bits (786), Expect = 7e-81
 Identities = 168/397 (42%), Positives = 250/397 (62%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            ME++IKAEF  +GF F+ E+E+L+KC++FCIN+ L P+DLV+SWE+YYLN Q++G  V+ 
Sbjct: 1    MEDEIKAEFNNSGFIFDKEKEILQKCSTFCINFKLTPTDLVSSWEIYYLNRQINGTVVED 60

Query: 1049 SQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDN-EEDVLQHTPVKQSNGF 873
            ++MDGFL +LQ++QK  +  +E D H YSS DVD++LN E+++  EDVL   P  +S   
Sbjct: 61   AEMDGFLGYLQSQQKVAIDEKELDLHIYSSRDVDMILNDEDEDIREDVLGTPPPFKSQNH 120

Query: 872  SLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLN-RDV 696
              + +      + N + GK                   +TPF  R+ + VV+F +N +  
Sbjct: 121  YSEPSDSTPQTIGNISSGKPS---------------KLATPFGRRTDKLVVKFSINNKPN 165

Query: 695  LDSIEKER-GEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRIK 519
             ++ EKE   E   +D+++RKV    RCSL V G  P  G R+M   IED+F +LE RI 
Sbjct: 166  TENREKEDDNENHEDDDVIRKVKPGKRCSLIVHGSGPEIGCRFMYDRIEDRFNALENRIS 225

Query: 518  NFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHRVR 339
             +ATAL ++          ++SQ+ I  VG+I CDGEG LN++S LL+ SAE SGG RVR
Sbjct: 226  KYATALVSSGQYEEPLDPTVSSQKIIFTVGMIYCDGEGHLNEKSTLLQSSAEHSGGQRVR 285

Query: 338  LDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITID 159
            ++LQ L ++S+FPGQ++G+EG N SGHC +AS+++DS P+ +    DD + P AK+  +D
Sbjct: 286  IELQNLSQFSIFPGQLVGIEGINPSGHCFIASKLVDSIPLPI---ADDANLPPAKKQALD 342

Query: 158  PKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
             +      +       ++IA+GPFTTTDNL F+PL +
Sbjct: 343  QEIFFLTRE-------IIIASGPFTTTDNLLFEPLRE 372


>ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Glycine
            max]
          Length = 605

 Score =  307 bits (786), Expect = 7e-81
 Identities = 169/399 (42%), Positives = 246/399 (61%), Gaps = 7/399 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IK+EF ++GF  E E+E+L KC +FCINYSL PSDLV+SWE+YYLN QL+   VQ+
Sbjct: 1    MEEEIKSEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQN 60

Query: 1049 SQMDGFLHHLQNEQKE--VLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNG 876
            +++DGFL HLQNE+KE  + + EE   H YS  DV+++LN ++D +++    TP+     
Sbjct: 61   AEIDGFLLHLQNEKKEDVIKEKEEAGLHIYSIGDVEMILNNDDDTKDNT-PGTPINHHQD 119

Query: 875  FSLQNASD-----FLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFV 711
              L  A D     + ++L++  P K                    TPF  R+ +F V+F 
Sbjct: 120  -PLSPAPDTPSLMYENVLSSGKPSKSK----------------LVTPFSKRTDKFAVKFS 162

Query: 710  LNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLE 531
            +N   + ++E +     +ED+++R+VP   R SL + G  P  G R++    ED+  ++E
Sbjct: 163  IN--TVPNVENDE----NEDDVVRRVPLFERSSLSIHGSGPKPGCRFLYDRTEDRLNAIE 216

Query: 530  KRIKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGG 351
             R++    A  A+           ASQ SI  VG+ICCDGEGRLN++SV+L+ S E SGG
Sbjct: 217  NRLRKHTRAFVASGLHEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGG 276

Query: 350  HRVRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKR 171
              VRLDLQ+L  YS+FPGQ++G+ GHN SGHC VA++++DS P SV     D+ +  AK+
Sbjct: 277  ECVRLDLQRLSHYSIFPGQIVGIGGHNPSGHCFVATKLVDSIPTSVA----DEDSNPAKK 332

Query: 170  ITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPL 54
              +D ++Q       +  +SM+IAAGPFTTTDNL F+PL
Sbjct: 333  QAVDKENQPTDLLCKQRKLSMIIAAGPFTTTDNLLFEPL 371


>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
          Length = 606

 Score =  305 bits (780), Expect = 3e-80
 Identities = 168/399 (42%), Positives = 245/399 (61%), Gaps = 7/399 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGEEEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDGCKVQS 1050
            MEE+IK+EF ++GF  E E+E+L KC ++CINYSL PSDLV+SWE+YYLN QL+   VQ+
Sbjct: 1    MEEQIKSEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQN 60

Query: 1049 SQMDGFLHHLQNEQKEVL--KNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSNG 876
            +++DGFL HLQNE+KE +  + EE   H YS  DV+++LN ++D +++    TP+     
Sbjct: 61   TEIDGFLLHLQNEKKETVIKEKEEAGLHIYSIGDVEMILNNDDDTKDNT-PGTPINHHQD 119

Query: 875  FSLQNASDFLS-----ILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFV 711
              L  A D  S     +L++  P K                    TPF  R+ +FVV+F 
Sbjct: 120  -PLSPALDTTSLMYENVLSSGKPSKSK----------------LITPFSKRTDKFVVKFS 162

Query: 710  LNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLE 531
            +N   +  +EK   +   ED++L +VP   RCSL +    P  G R++    ED+  ++E
Sbjct: 163  IN--TVPKVEKAEND---EDDVLTRVPLHERCSLSIHRSGPKPGCRFLYDRTEDRLNAIE 217

Query: 530  KRIKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGG 351
             R++ +  A  A+           ASQ SI  VG+ICCDGEGRLN++SV+L+ S E SGG
Sbjct: 218  NRLRKYTRAFVASGLYEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGG 277

Query: 350  HRVRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKR 171
              VRLDLQ+L  YS+FPGQ++G+ GHN SGHC VA++++D    S+P+ + ++ +  AK+
Sbjct: 278  ECVRLDLQRLSHYSIFPGQIVGIGGHNPSGHCFVATKLVD----SIPTYIANEDSNPAKK 333

Query: 170  ITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPL 54
              +D ++Q          +SM+IAAGPFTTTDNL F+PL
Sbjct: 334  QAVDKENQPTDLLCKERELSMIIAAGPFTTTDNLLFEPL 372


>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
          Length = 627

 Score =  303 bits (777), Expect = 7e-80
 Identities = 168/402 (41%), Positives = 241/402 (59%), Gaps = 8/402 (1%)
 Frame = -3

Query: 1229 MEEKIKAEFVQNGFSFEGE-----EEVLKKCASFCINYSLEPSDLVTSWELYYLNLQLDG 1065
            ME +I+AE   +GFS  G       ++L    ++CINY + P+DLV++WE+YYLN QLDG
Sbjct: 1    MEAEIRAELESSGFSIGGAGPEDAAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60

Query: 1064 CKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQ 885
             K+Q S +DGF  HLQNE KE +  EE D H YSSNDVD+LLN  + +E   L+ TP  +
Sbjct: 61   LKLQRSYLDGFQSHLQNEVKERIIEEEADLHIYSSNDVDMLLNNSHADEAAFLE-TPGSK 119

Query: 884  SNGFSLQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLN 705
                  +  +  L++ +++                        TPF  R ++F  Q+VLN
Sbjct: 120  QEKTPGEPFNSELTLTSDRPSSS----------RVAKTNGDRITPFATRVNKFTQQYVLN 169

Query: 704  RDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKR 525
             D   S+        ++DE+++++    RCSL+V    P  G R+M   +ED+F  LE R
Sbjct: 170  ADNAASMPSTHEAETTDDEVIKRIQPSQRCSLQVQRSQPEPGCRFMYDRMEDRFNYLEDR 229

Query: 524  IKNFATALAANESCSVTHHVALASQESILVVGLICCDGEGRLNDQSVLLEGSAEFSGGHR 345
            ++  AT  +A+  C       LAS+E +  VG++ CDGEGRLN++S+LL+GS E S G R
Sbjct: 230  LRKSATLFSASGFCGEPADATLASEEKMFAVGMVTCDGEGRLNEKSILLQGSVEHSRGQR 289

Query: 344  VRLDLQKLLKYSVFPGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRIT 165
            VRLDL+ L  +S+FPGQV+G+EGHN SGHC VAS++IDS P+SV +Q+     P AK+  
Sbjct: 290  VRLDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDAQL-----PSAKKQA 344

Query: 164  ID---PKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLED 48
            +D        +A   PR  +S +IAAGP+TTTDNL F+PL++
Sbjct: 345  VDNGNHHQNSDAGTLPRA-LSSVIAAGPYTTTDNLLFEPLQE 385