BLASTX nr result
ID: Ephedra28_contig00028049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00028049
(689 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006405706.1| hypothetical protein EUTSA_v10028323mg [Eutr... 78 2e-12
ref|XP_002870827.1| pentatricopeptide repeat-containing protein ... 78 3e-12
ref|XP_006287393.1| hypothetical protein CARUB_v10000599mg [Caps... 77 7e-12
ref|XP_006282941.1| hypothetical protein CARUB_v10007510mg [Caps... 76 9e-12
ref|XP_003637044.1| Pentatricopeptide repeat-containing protein ... 74 4e-11
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea m... 74 6e-11
ref|XP_006358860.1| PREDICTED: pentatricopeptide repeat-containi... 73 1e-10
ref|NP_198689.1| pentatricopeptide repeat-containing protein [Ar... 72 1e-10
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 72 1e-10
gb|EOY04353.1| Tetratricopeptide repeat (TPR)-like superfamily p... 72 2e-10
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|5... 72 2e-10
ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-10
ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containi... 71 3e-10
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat... 71 4e-10
ref|XP_002887091.1| pentatricopeptide repeat-containing protein ... 71 4e-10
ref|XP_006581214.1| PREDICTED: pentatricopeptide repeat-containi... 70 5e-10
ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containi... 70 5e-10
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat... 70 5e-10
ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containi... 70 5e-10
>ref|XP_006405706.1| hypothetical protein EUTSA_v10028323mg [Eutrema salsugineum]
gi|557106844|gb|ESQ47159.1| hypothetical protein
EUTSA_v10028323mg [Eutrema salsugineum]
Length = 619
Score = 78.2 bits (191), Expect = 2e-12
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL +K R +I M + +V N + V++ C + + A + EME
Sbjct: 196 VLLNSLVKERLTDTVWKIFKKMVKLGVVANIHLYNVLVHACSKSGDHERAEKLLSEMEEK 255
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
GV PD TY+ L+ +G+ AL D M+ G+ P + LI + + ++
Sbjct: 256 GVFPDLFTYNTLISAYCRKGMHYEALSVQDRMQRSGVGPDIVTYNSLIHGFCREGRMKEA 315
Query: 387 ESLIR--NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L R GV +++ LID RM+ + + +R+ +++ G S Y + R
Sbjct: 316 TRLFREIKGVVTANHVTYTTLIDGYCRMNDIDEALRLREVMEARGFSPGVVTYNSILRKL 375
Query: 561 CDKGLIHDALKICTSL--PEVDMNENLSSAILAAYCK-ADMPDSAK 689
C+ G I +A ++ T + ++ + + ++ AYCK DM + K
Sbjct: 376 CEDGRIREANRLLTEISGKRIEPDNITCNTLINAYCKNGDMVSAVK 421
>ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316663|gb|EFH47086.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 582
Score = 77.8 bits (190), Expect = 3e-12
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL +K R +I M + +V N + V++ C + ++ +A + EME
Sbjct: 173 VLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEK 232
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
GV PD TY+ L+ + + + AL D M G+ P + LI + + ++
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREA 292
Query: 387 ESLIR--NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L R GV ++ LID RM+ + + +R+ +++ G Y + R
Sbjct: 293 TRLFRKIKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKL 352
Query: 561 CDKGLIHDALKICT--SLPEVDMNENLSSAILAAYCK-ADMPDSAK 689
C+ G I +A ++ T S+ +++ + + ++ AYCK DM + K
Sbjct: 353 CEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVK 398
>ref|XP_006287393.1| hypothetical protein CARUB_v10000599mg [Capsella rubella]
gi|482556099|gb|EOA20291.1| hypothetical protein
CARUB_v10000599mg [Capsella rubella]
Length = 561
Score = 76.6 bits (187), Expect = 7e-12
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 6/221 (2%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
YN ++ K K A ++ ++MR + N T+ ++ A EA V +M+
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKASEANKVMDQMQ 330
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
S G+ P+ TY+ L+ G + +AL +++ GL PS + L+ + K +
Sbjct: 331 SDGINPNLITYNTLIDGFCGMGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 381 GIESLIR----NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFV 548
G +++ G+ S LID R D++ + I++ S ++E+G Y+ +
Sbjct: 391 GAAKMVKEMEERGI-KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLVPDVHTYSVL 449
Query: 549 ARWFCDKGLIHDALKICTSLPE--VDMNENLSSAILAAYCK 665
FC KG +++A ++ S+ E ++ NE + + ++ YCK
Sbjct: 450 IHGFCIKGQMNEASRLLKSMVEKKLEPNEVIYNTMILGYCK 490
>ref|XP_006282941.1| hypothetical protein CARUB_v10007510mg [Capsella rubella]
gi|482551646|gb|EOA15839.1| hypothetical protein
CARUB_v10007510mg [Capsella rubella]
Length = 606
Score = 76.3 bits (186), Expect = 9e-12
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL +K R ++ M + +V N + V++ C + + +A + EME
Sbjct: 173 VLLSSLVKERLTDTVWKVFKKMVKLGVVANIHVYNVLVHACSKSGDFEKAEKLLGEMEEK 232
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
GV PD TY+ L+ + +G+ AL D M G+ P + LI + + ++
Sbjct: 233 GVFPDLFTYNTLISVYCKKGMHYEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREA 292
Query: 387 ESLIR--NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L R GV +++ LID RM+ + + +R+ +++ G S Y +
Sbjct: 293 TRLFREIKGVVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILHKL 352
Query: 561 CDKGLIHDALKICTSL--PEVDMNENLSSAILAAYCK-ADMPDSAK 689
C G I +A ++ T + +++ + + ++ AYCK DM + K
Sbjct: 353 CFDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIGDMVSAVK 398
>ref|XP_003637044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358346621|ref|XP_003637365.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355502979|gb|AES84182.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355503300|gb|AES84503.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 448
Score = 73.9 bits (180), Expect = 4e-11
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Frame = +3
Query: 12 IDDYNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFH 191
+D YN LLR+ KR ++R + + M+ + + N T+ +++S N EA V
Sbjct: 241 VDRYNFLLRMICKRGDYERVVDLVEKMKKIGVEPNGSTYNLLISCLFKIGNFAEACQVLE 300
Query: 192 EMESVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYL--- 362
ME+ L T+D ++R+L G ++ AL F+D+M L G++P + +I+ Y
Sbjct: 301 TMENENGLSKEFTFDTIIRLLCKHGQIDLALKFIDKMTLKGVEPCSLTHAAVIKCYFELG 360
Query: 363 KHDNLQGIESLIRNGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYA 542
K+D + SS E L F+ SV RIL + + G VY
Sbjct: 361 KYDEAHEYVVVCAGKNSYSSNENYTLLASLHFKKGSVLLSQRILHEMMDKGLKPNYSVYM 420
Query: 543 FVARWF 560
+ ++F
Sbjct: 421 KIRKYF 426
>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product
[Vitis vinifera]
Length = 659
Score = 73.9 bits (180), Expect = 4e-11
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Frame = +3
Query: 21 YNMLLRVCLK-RRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEM 197
Y+ LL C+K + + +AL + +M L + + +L+VC + +EA + F++M
Sbjct: 208 YSTLLAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQM 267
Query: 198 ESVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNL 377
+ G LP+ Y LL ++ G +A + + +M+ GL P+ L L++VY
Sbjct: 268 KDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVY------ 321
Query: 378 QGIESLIRNGVFSSSPEALIFLID---------HLFRMDSVPQGIRIL---SLLQEIGAS 521
+R G+F S E L L D + MD + + RIL S+ +E+
Sbjct: 322 ------VRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKK 375
Query: 522 DFDD---VYAFVARWFCDKGLIHDALKICTSLPEVDMNENL--SSAILAAYCKADMPDS 683
Y+ + FC GL+ +A ++ +L + +L AYC+A +S
Sbjct: 376 QVKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMES 434
>tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 73.6 bits (179), Expect = 6e-11
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Frame = +3
Query: 6 VPIDDYNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSV 185
V I N L+ + K A ++ M + + F+ T+ +++ C EA+ +
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519
Query: 186 FHEMESVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLK 365
+M G PD T++ LR + G V L LD+M+ GLKP + +I Y K
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579
Query: 366 ----HDNLQGIESLIRNGVFSSSPEALIF--LIDHLFRMDSVPQGIRILSLLQEIGASDF 527
H + + LI+NG+ P A+I+ LI R S+ I +L ++ G
Sbjct: 580 AKDVHKANKYLIELIKNGL---RPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636
Query: 528 DDVYAFVARWFCDKGLIHDALKICTS--LPEVDMNENLSSAILAAYCKADMPDSA 686
Y + W C GL+ +A +I L +++ + I+ +CK D A
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEA 691
>ref|XP_006358860.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Solanum tuberosum]
Length = 561
Score = 72.8 bits (177), Expect = 1e-10
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
YN L+ V +A + ++MR+ +V+N T+ ++ K EA + +M+
Sbjct: 270 YNSLINVYCSDGEVSKAFELFDEMRHNGVVYNVVTYNTLIRGLCQEKRVLEAEKLVDQMK 329
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
G+ P+ TY+ L+ S G + + L ++++ GL P+ + LI + + NL
Sbjct: 330 LAGLHPNLITYNTLIDGCCSAGKLEKGLTLFNQIKSYGLTPTSITYNTLIAGFSRAGNLS 389
Query: 381 GIESLIR----NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFV 548
+ +R G+F S I LID R + + + + + S + + G + Y +
Sbjct: 390 KVVDFVREMEERGIFPSKVTYTI-LIDAFARSNDMEKALEVFSRMHKAGLTVDLCTYGAL 448
Query: 549 ARWFCDKGLIHDALKICTSLPEVDM--NENLSSAILAAYCK 665
+C +G + +A K+ S+ E + N+ + + ++ YCK
Sbjct: 449 IHGWCSQGNMKEASKLFLSMSEYHLQPNDVICNTMIFGYCK 489
>ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g38730 gi|10176899|dbj|BAB10131.1| unnamed protein
product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 72.4 bits (176), Expect = 1e-10
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL +K+R +I M + +V N + V++ C + + +A + EME
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
GV PD TY+ L+ + + + AL D M G+ P+ + I + + ++
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 387 ESLIR--NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L R +++ LID RM+ + + +R+ +++ G S Y + R
Sbjct: 293 TRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 561 CDKGLIHDALKICTSL--PEVDMNENLSSAILAAYCK-ADMPDSAK 689
C+ G I +A ++ T + +++ + + ++ AYCK DM + K
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 72.4 bits (176), Expect = 1e-10
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL K R ++ M + + N + V++ C + + +A ++ EMES
Sbjct: 170 VLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESK 229
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
V PD TY+ L+ + +G+ AL D M G+KP + LI + K ++
Sbjct: 230 CVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREA 289
Query: 387 ESLIRNGVFSSSPEALIF--LIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L + + ++P + + LID R++ + Q +R+ ++ G Y + R
Sbjct: 290 MRLFKE-IRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKL 348
Query: 561 CDKGLIHDALKICTSLPE--VDMNENLSSAILAAYCK-ADMPDSAK 689
C+ G I DA K+ + E ++ + + ++ AYCK DM + K
Sbjct: 349 CEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALK 394
>gb|EOY04353.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 593
Score = 72.0 bits (175), Expect = 2e-10
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL +K + ++ M + +V N + V++ C + +A V EME
Sbjct: 170 VLLNCLVKEKLIDNVWKVYKKMVRLGVVGNLHVYNVLVHACCKGGDVEKAEKVLSEMELK 229
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
V PD TY+ L+ + +G+ AL D M G+ P + LI + + ++
Sbjct: 230 SVFPDRFTYNTLIALYCKKGMHYEALCVQDRMERAGISPDIITYNSLIYGFCREGRMREA 289
Query: 387 ESLIRNGVFSSSPEALIF--LIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L + + SP + + LID R++ + + +R+ +++ G Y + R
Sbjct: 290 VRLFKE-IKGVSPNHVTYTTLIDGYCRVNDLGEALRVREMMEAKGIYPGVVTYNSIIRKL 348
Query: 561 CDKGLIHDALKICTSLPE--VDMNENLSSAILAAYCK-ADMPDSAK 689
C++G I +A ++ + E V+ + + ++ AYCK DM + K
Sbjct: 349 CEEGKIREANRVLNEMSEKKVEPDNVTCNTLINAYCKIGDMGSAMK 394
>ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|566213342|ref|XP_006373499.1| hypothetical protein
POPTR_0017s14300g [Populus trichocarpa]
gi|550320321|gb|ERP51296.1| hypothetical protein
POPTR_0017s14300g [Populus trichocarpa]
Length = 593
Score = 72.0 bits (175), Expect = 2e-10
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Frame = +3
Query: 27 MLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEMESV 206
+LL K R +I M + +V N + V+L C + + +A V EME
Sbjct: 176 VLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELK 235
Query: 207 GVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQGI 386
V PD TY+ L+ + +G+ AL D M + G+ P + LI + + ++
Sbjct: 236 CVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREA 295
Query: 387 ESLIRNGVFSSSPEALIF--LIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVARWF 560
L R+ + +P + + LID R++ + + +R+ ++ E G Y + R
Sbjct: 296 VQLFRD-IKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKL 354
Query: 561 CDKGLIHDALKICTSLPE--VDMNENLSSAILAAYCK-ADMPDSAK 689
C+ G + DA + + E ++ + + ++ AYCK DM + K
Sbjct: 355 CEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALK 400
>ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 642
Score = 71.6 bits (174), Expect = 2e-10
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 19/240 (7%)
Frame = +3
Query: 21 YNMLLRVCLK-RRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEM 197
Y+ LL C+K + + +AL + +++N +L + + +L++C + EA S F +M
Sbjct: 191 YSTLLAGCIKFKHGYSKALELVQELQNNELQMDSVIYGTLLAICASNNKWEEAESYFKQM 250
Query: 198 ESVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNL 377
+ G LP+ Y LL + G +A + +M+ GL P+ +L L++ Y
Sbjct: 251 KDEGHLPNEFHYSSLLNAYSISGNYKKADDVVQDMKSAGLVPNKVTLTTLLKAY------ 304
Query: 378 QGIESLIRNGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASD-----FDDV-- 536
+R G+F S E L L + D +P I ++ + G + FD++
Sbjct: 305 ------VRGGLFEKSRELLTELEALGYAEDEMPYCI-LMDAFAKAGRIEDAKLVFDEIKE 357
Query: 537 ---------YAFVARWFCDKGLIHDALKICTSLPEVDMNENL--SSAILAAYCKADMPDS 683
Y+ + FC GL+ DA ++ +L + ++ AYC+A DS
Sbjct: 358 KSVRSDGYSYSIMISAFCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAGEMDS 417
>ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 71.2 bits (173), Expect = 3e-10
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Frame = +3
Query: 3 LVP-IDDYNMLLRVCLK-RRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREA 176
LVP + Y+ LL C K + +AL + +M + L + T+ +LSVC + K EA
Sbjct: 188 LVPDVFTYSTLLAGCAKVNGGYYKALELVQEMMSNGLEMDSVTYGSLLSVCASHKECNEA 247
Query: 177 VSVFHEMESVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRV 356
F +M+ G P+ + Y LL ++ +A ++EMR GL + L++V
Sbjct: 248 AKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEALIEEMRSAGLVLNKVIYTTLLKV 307
Query: 357 YLKHDNLQGIESLIRNGV---FSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDF 527
Y+K + + L++ ++ L+D L + + + + + E
Sbjct: 308 YVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKQVKTD 367
Query: 528 DDVYAFVARWFCDKGLIHDALKICTSLPEV--DMNENLSSAILAAYCKA 668
Y+ + FC +GL+ DA K+ + E + + +A+L+AYC+A
Sbjct: 368 GYSYSIMISAFCRRGLLEDAKKLASEFEEKYDKYDIVILNAMLSAYCRA 416
>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 70.9 bits (172), Expect = 4e-10
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
Y++L+ K A ++ ++M+ L N TF ++ ++ A++ +H+M
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQML 355
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
++GV PD Y+ LL L G VN+A +DEMR++G+KP + LI Y K +L+
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLE 415
Query: 381 GIESLIRNGVFSS----SPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFV 548
IR G+ A LI R V R L + E G D Y V
Sbjct: 416 SAME-IRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Query: 549 ARWFCDKGLIHDALKICTSLPEVDMN 626
+C KG + K+ L E+ +N
Sbjct: 475 IDGYCKKGNVKMGFKL---LKEMQIN 497
>ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332932|gb|EFH63350.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 568
Score = 70.9 bits (172), Expect = 4e-10
Identities = 52/221 (23%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
YN ++ K K A ++ ++MR + N T+ ++ A EA V +M+
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
S G+ P+ TY+ L+ G + +AL +++ GL PS + L+ + K +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 381 G----IESLIRNGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFV 548
G ++ + G+ S LID RMD++ + I++ S ++E+G + Y+ +
Sbjct: 391 GAGKVVKEMEERGI-KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449
Query: 549 ARWFCDKGLIHDALKICTSL--PEVDMNENLSSAILAAYCK 665
FC KG +++A ++ + +++ N+ + + ++ YCK
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCK 490
>ref|XP_006581214.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like isoform X2 [Glycine max]
gi|571458747|ref|XP_006581215.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g11690-like isoform X3 [Glycine max]
Length = 568
Score = 70.5 bits (171), Expect = 5e-10
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
YN L+ +A ++ +MR + T+ +++ K EAV + H++
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
VG+ P+ TY++L+ G ++ A+ ++++ GL P+ + LI Y K +NL
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 381 GIESLIR---NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVA 551
G L++ + S LID R++ + + SL+++ G Y+ +
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 552 RWFCDKGLIHDALKICTSLPEVDMNEN--LSSAILAAYCK 665
C G + +A K+ SL E+ + N + + ++ YCK
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485
>ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 651
Score = 70.5 bits (171), Expect = 5e-10
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Frame = +3
Query: 3 LVP-IDDYNMLLRVCLK-RRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREA 176
LVP + Y+ LL C K + +AL + ++ + L + T+ +LSVC + K EA
Sbjct: 188 LVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEA 247
Query: 177 VSVFHEMESVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRV 356
F +M+ G P+ + Y LL ++ +A + ++EMR GL + L++V
Sbjct: 248 AKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKV 307
Query: 357 YLKHDNLQGIESLIRNGV---FSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDF 527
Y+K + + L++ ++ L+D L + + + + + E
Sbjct: 308 YVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTD 367
Query: 528 DDVYAFVARWFCDKGLIHDALKICTSLPEV--DMNENLSSAILAAYCKA 668
Y+ + FC GL+ DA K+ + E + + +A+L+AYC+A
Sbjct: 368 GYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRA 416
>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 70.5 bits (171), Expect = 5e-10
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
Y++L+ K A ++ ++M+ L N TF ++ ++ A++ +H+M
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML 355
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
++GV PD Y+ LL L G VN+A +DEM+++G+KP + LI Y K +L+
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLE 415
Query: 381 GIESLIRNGVFSS----SPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFV 548
IR G+ A LI R V R L + E G D Y V
Sbjct: 416 SAME-IRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Query: 549 ARWFCDKGLIHDALKICTSLPEVDMN 626
+C KG + K+ L E+ +N
Sbjct: 475 IDGYCKKGNVKMGFKL---LKEMQIN 497
Score = 56.2 bits (134), Expect = 9e-06
Identities = 48/223 (21%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
YN+L+ K + + A I N++R L +F +++ ++N E + ME
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLI----RVYLKH 368
+ PD TY VL+ L G ++ A DEM+ GL+P+ + LI R
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345
Query: 369 DNLQGIESLIRNGVFSSSPEALIF--LIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYA 542
+ ++ GV P+ +++ L++ L ++ V + +++ ++ +G Y
Sbjct: 346 SAMNTYHQMLTMGV---KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402
Query: 543 FVARWFCDKGLIHDALKICTSLPE--VDMNENLSSAILAAYCK 665
+ +C +G + A++I + E V ++ +A+++ +C+
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445
>ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like isoform X1 [Glycine max]
Length = 556
Score = 70.5 bits (171), Expect = 5e-10
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Frame = +3
Query: 21 YNMLLRVCLKRRAFKRALRIANDMRNMDLVFNEDTFRVILSVCQATKNAREAVSVFHEME 200
YN L+ +A ++ +MR + T+ +++ K EAV + H++
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 201 SVGVLPDNHTYDVLLRILTSRGLVNRALLFLDEMRLIGLKPSHHSLCRLIRVYLKHDNLQ 380
VG+ P+ TY++L+ G ++ A+ ++++ GL P+ + LI Y K +NL
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 381 GIESLIR---NGVFSSSPEALIFLIDHLFRMDSVPQGIRILSLLQEIGASDFDDVYAFVA 551
G L++ + S LID R++ + + SL+++ G Y+ +
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 552 RWFCDKGLIHDALKICTSLPEVDMNEN--LSSAILAAYCK 665
C G + +A K+ SL E+ + N + + ++ YCK
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485