BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027981
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006847805.1| hypothetical protein AMTR_s00029p00035130 [A...    79   6e-13
ref|XP_006829241.1| hypothetical protein AMTR_s00001p00272500 [A...    79   8e-13
ref|XP_004136946.1| PREDICTED: upstream activation factor subuni...    77   3e-12
ref|XP_006437339.1| hypothetical protein CICLE_v10033040mg [Citr...    76   4e-12
ref|XP_004133931.1| PREDICTED: uncharacterized protein LOC101218...    75   7e-12
ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...    75   7e-12
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]    75   7e-12
ref|XP_006298767.1| hypothetical protein CARUB_v10014869mg [Caps...    75   9e-12
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...    75   9e-12
ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arab...    75   1e-11
ref|XP_006422864.1| hypothetical protein CICLE_v10029545mg [Citr...    74   2e-11
ref|XP_002313162.1| SWIB complex BAF60b domain-containing family...    74   2e-11
ref|XP_002298761.1| SWIB complex BAF60b domain-containing family...    74   3e-11
gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|2489967...    73   3e-11
ref|XP_002885945.1| SWIB complex BAF60b domain-containing protei...    73   3e-11
gb|AAM65680.1| unknown [Arabidopsis thaliana]                          73   3e-11
ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsi...    73   3e-11
gb|EHN00124.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces ...    73   4e-11
ref|XP_003610630.1| Upstream activation factor subunit UAF30 [Me...    73   4e-11
ref|XP_004512323.1| PREDICTED: upstream activation factor subuni...    72   1e-10

>ref|XP_006847805.1| hypothetical protein AMTR_s00029p00035130 [Amborella trichopoda]
           gi|548851110|gb|ERN09386.1| hypothetical protein
           AMTR_s00029p00035130 [Amborella trichopoda]
          Length = 130

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 15  PLKSCTRENKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENR 194
           P  +  ++ +EP    KP+   + P ++DL+G+ E      L+LIW YIK HNLQ+PEN+
Sbjct: 36  PPSTAVKKKREPRGITKPR--PVSPAMRDLLGVSEIPRTQALKLIWAYIKEHNLQDPENK 93

Query: 195 REIVCDEKLKAILGGRDTI 251
           + IVCDEKLK I GGRD +
Sbjct: 94  KIIVCDEKLKTIFGGRDRV 112


>ref|XP_006829241.1| hypothetical protein AMTR_s00001p00272500 [Amborella trichopoda]
           gi|548834220|gb|ERM96657.1| hypothetical protein
           AMTR_s00001p00272500 [Amborella trichopoda]
          Length = 129

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/76 (48%), Positives = 52/76 (68%)
 Frame = +3

Query: 24  SCTRENKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREI 203
           S   + +EP    KP++ +  P +Q+L+G+ E      L+LIW YIK HNLQ+PEN++ I
Sbjct: 41  SSPSKKREPRGITKPRLVS--PAMQELLGVSEIPRTQALKLIWAYIKQHNLQDPENKKII 98

Query: 204 VCDEKLKAILGGRDTI 251
           VCDEKLK+I GGRD +
Sbjct: 99  VCDEKLKSIFGGRDRV 114


>ref|XP_004136946.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
           sativus]
          Length = 140

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +3

Query: 21  KSCTRENKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRRE 200
           K  T  ++EP    KP+   + P+LQ LVG PE S    L++IW YIK +NLQ P N++ 
Sbjct: 52  KQATAPSREPRGITKPR--KISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKV 109

Query: 201 IVCDEKLKAILGGRDTI 251
           I CDEKLK I GG+D +
Sbjct: 110 IACDEKLKKIFGGKDEV 126


>ref|XP_006437339.1| hypothetical protein CICLE_v10033040mg [Citrus clementina]
           gi|568862571|ref|XP_006484753.1| PREDICTED: upstream
           activation factor subunit UAF30-like [Citrus sinensis]
           gi|557539535|gb|ESR50579.1| hypothetical protein
           CICLE_v10033040mg [Citrus clementina]
          Length = 137

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 33/61 (54%), Positives = 45/61 (73%)
 Frame = +3

Query: 69  KIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKLKAILGGRDT 248
           K+  + P L   +G PEAS +D +R IW ++K HNLQNPEN+REI+CDEKLKAI  G++ 
Sbjct: 60  KVSPVSPALAKFLGAPEASRSDAVRQIWAHVKTHNLQNPENKREILCDEKLKAIFEGKNA 119

Query: 249 I 251
           +
Sbjct: 120 V 120


>ref|XP_004133931.1| PREDICTED: uncharacterized protein LOC101218027 [Cucumis sativus]
          Length = 157

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 33/61 (54%), Positives = 45/61 (73%)
 Frame = +3

Query: 69  KIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKLKAILGGRDT 248
           K+  + P L + +G+ EAS +D +  IW YIKLHNLQNP+N+REI CD+KLKAI  GR+ 
Sbjct: 81  KVTQVSPALSNFLGVSEASRSDAVTQIWSYIKLHNLQNPDNKREIYCDDKLKAIFEGREK 140

Query: 249 I 251
           +
Sbjct: 141 V 141


>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 42  KEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKL 221
           +EP    KP+   + P++QD +G+PE      L+ IW YIK HNLQ+PEN++ IVCDEKL
Sbjct: 63  REPRGIMKPR--RISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKL 120

Query: 222 KAILGGRDTI 251
           K+I  G+D +
Sbjct: 121 KSIFAGKDRV 130


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 42  KEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKL 221
           +EP    KP+   + P++QD +G+PE      L+ IW YIK HNLQ+PEN++ IVCDEKL
Sbjct: 63  REPRGIMKPR--RISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKL 120

Query: 222 KAILGGRDTI 251
           K+I  G+D +
Sbjct: 121 KSIFAGKDRV 130


>ref|XP_006298767.1| hypothetical protein CARUB_v10014869mg [Capsella rubella]
           gi|482567476|gb|EOA31665.1| hypothetical protein
           CARUB_v10014869mg [Capsella rubella]
          Length = 142

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +3

Query: 30  TRENKE-PMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIV 206
           T  NK  P    KP+  T  P++QD+VGLPE      L+ IW YIK H+LQ+P+N+REI+
Sbjct: 56  TATNKRVPRGIMKPRPVT--PEMQDIVGLPEIPRTQALKRIWAYIKEHDLQDPQNKREIL 113

Query: 207 CDEKLKAILGGRDTI 251
           CDEKLK I  G+D +
Sbjct: 114 CDEKLKKIFEGKDRV 128


>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 35/81 (43%), Positives = 52/81 (64%)
 Frame = +3

Query: 9   KEPLKSCTRENKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPE 188
           K P    T     P +    K   + P L+  +G+PEAS A+ ++ IW++IKL+NLQNP 
Sbjct: 31  KTPAPPRTAAKGPPRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPT 90

Query: 189 NRREIVCDEKLKAILGGRDTI 251
           N+REI+CDEKLK++  G+D +
Sbjct: 91  NKREILCDEKLKSVFEGKDKV 111


>ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
           lyrata] gi|297314994|gb|EFH45417.1| hypothetical protein
           ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/74 (44%), Positives = 51/74 (68%)
 Frame = +3

Query: 30  TRENKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVC 209
           T + +EP    KP+   + P++QD+VG+PE      L+ IW YIK H+LQ+P+N+R+I+C
Sbjct: 59  TTKTREPRGIMKPR--PVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIIC 116

Query: 210 DEKLKAILGGRDTI 251
           DEKLK I  G++ +
Sbjct: 117 DEKLKKIFEGKERV 130


>ref|XP_006422864.1| hypothetical protein CICLE_v10029545mg [Citrus clementina]
           gi|557524798|gb|ESR36104.1| hypothetical protein
           CICLE_v10029545mg [Citrus clementina]
          Length = 139

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = +3

Query: 42  KEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKL 221
           +EP    KP+   + P+++  VG PE      L+LIW +IK HNLQ+PEN++ I+CDEKL
Sbjct: 58  REPRGIMKPR--RVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQDPENKKVIICDEKL 115

Query: 222 KAILGGRDTI 251
           K I GGRD +
Sbjct: 116 KKIFGGRDRV 125


>ref|XP_002313162.1| SWIB complex BAF60b domain-containing family protein [Populus
           trichocarpa] gi|222849570|gb|EEE87117.1| SWIB complex
           BAF60b domain-containing family protein [Populus
           trichocarpa]
          Length = 141

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = +3

Query: 39  NKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEK 218
           N+ P    KP+   + P++ D +G PE S    L+LIW +IK HNLQ+P N++ I+CDEK
Sbjct: 58  NRAPRGIMKPR--RVSPEMADFIGAPEVSRTQALKLIWAHIKEHNLQDPSNKKNIICDEK 115

Query: 219 LKAILGGRDTI 251
           LK I  GRD +
Sbjct: 116 LKKIFAGRDQV 126


>ref|XP_002298761.1| SWIB complex BAF60b domain-containing family protein [Populus
           trichocarpa] gi|118485810|gb|ABK94753.1| unknown
           [Populus trichocarpa] gi|222846019|gb|EEE83566.1| SWIB
           complex BAF60b domain-containing family protein [Populus
           trichocarpa]
          Length = 140

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/71 (49%), Positives = 46/71 (64%)
 Frame = +3

Query: 39  NKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEK 218
           N+ P    KPK   + P++ D VG PE S   VL+LIW +IK  NLQ+P N++ I+CDEK
Sbjct: 57  NRAPSGIMKPK--RVSPEMADFVGAPEVSRTQVLKLIWAHIKERNLQDPSNKKNIICDEK 114

Query: 219 LKAILGGRDTI 251
           LK I  GRD +
Sbjct: 115 LKKIFPGRDQV 125


>gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|24899679|gb|AAN65054.1|
           unknown protein [Arabidopsis thaliana]
          Length = 141

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
 Frame = +3

Query: 36  ENKEPMTAHKP------KIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRR 197
           E+ EP   +K       K   + P++QD+V LPE +    L+ IW YIK H+LQ+P+N+R
Sbjct: 50  ESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKR 109

Query: 198 EIVCDEKLKAILGGRDTI 251
           EI+CDEKLK I  GRD +
Sbjct: 110 EILCDEKLKKIFEGRDRV 127


>ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331785|gb|EFH62204.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 141

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +3

Query: 30  TRENKE-PMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIV 206
           T  NK  P    KP+   + P++QD+V LPE +    L+ IW YIK H+LQ+P+N+REI+
Sbjct: 55  TATNKRVPRGIMKPR--PVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKREIL 112

Query: 207 CDEKLKAILGGRDTI 251
           CDEKLK I  GRD +
Sbjct: 113 CDEKLKKIFEGRDRV 127


>gb|AAM65680.1| unknown [Arabidopsis thaliana]
          Length = 141

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
 Frame = +3

Query: 36  ENKEPMTAHKP------KIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRR 197
           E+ EP   +K       K   + P++QD+V LPE +    L+ IW YIK H+LQ+P+N+R
Sbjct: 50  ESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKR 109

Query: 198 EIVCDEKLKAILGGRDTI 251
           EI+CDEKLK I  GRD +
Sbjct: 110 EILCDEKLKKIFEGRDRV 127


>ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein
           [Arabidopsis thaliana] gi|3650030|gb|AAC61285.1|
           expressed protein [Arabidopsis thaliana]
           gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 141

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
 Frame = +3

Query: 36  ENKEPMTAHKP------KIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRR 197
           E+ EP   +K       K   + P++QD+V LPE +    L+ IW YIK H+LQ+P+N+R
Sbjct: 50  ESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKR 109

Query: 198 EIVCDEKLKAILGGRDTI 251
           EI+CDEKLK I  GRD +
Sbjct: 110 EILCDEKLKKIFEGRDRV 127


>gb|EHN00124.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 219

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/80 (45%), Positives = 52/80 (65%)
 Frame = +3

Query: 3   KDKEPLKSCTRENKEPMTAHKPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQN 182
           KD + L++ T  NK P++  +     L   L +L+G P  +  DV+R +W YIK H+LQN
Sbjct: 105 KDADDLRTKTTVNKSPISTRQ---VILSKSLANLLGEPRLTRTDVVRQVWAYIKEHDLQN 161

Query: 183 PENRREIVCDEKLKAILGGR 242
           P+NR+EI+CDEKL+ I G R
Sbjct: 162 PKNRKEILCDEKLELIFGKR 181


>ref|XP_003610630.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
           gi|355511965|gb|AES93588.1| Upstream activation factor
           subunit UAF30 [Medicago truncatula]
           gi|388522227|gb|AFK49175.1| unknown [Medicago
           truncatula]
          Length = 143

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = +3

Query: 63  KPKIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKLKAILGGR 242
           KPK   + P++QDLVG PE S    L+ IW +IK HNLQNPE +R I CDEKLK +  GR
Sbjct: 68  KPK--KISPEMQDLVGQPEISRTQALKSIWAHIKEHNLQNPEKKRLIRCDEKLKKVFAGR 125

Query: 243 DTI 251
           D +
Sbjct: 126 DEV 128


>ref|XP_004512323.1| PREDICTED: upstream activation factor subunit UAF30-like [Cicer
           arietinum]
          Length = 130

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = +3

Query: 69  KIYTLPPQLQDLVGLPEASCADVLRLIWQYIKLHNLQNPENRREIVCDEKLKAILGGRDT 248
           K+  +  +L + +G PE S  D ++ +W+YIKL NLQNP N++EI CDEKLK I  G+D 
Sbjct: 53  KVVPVSSELGNFLGSPEVSRTDAVKRVWEYIKLQNLQNPSNKKEIFCDEKLKTIFDGKDK 112

Query: 249 IKAYALFWAVLRIVRN 296
           +    +F  + R++ N
Sbjct: 113 V----VFTEIARLLAN 124