BLASTX nr result

ID: Ephedra28_contig00027976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027976
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75949.1| unknown [Picea sitchensis] gi|294464230|gb|ADE776...    61   2e-07
gb|EXC31764.1| SNF1-related protein kinase regulatory subunit be...    55   7e-06
gb|EMJ07356.1| hypothetical protein PRUPE_ppa013534mg [Prunus pe...    55   7e-06

>gb|ADE75949.1| unknown [Picea sitchensis] gi|294464230|gb|ADE77629.1| unknown
           [Picea sitchensis]
          Length = 126

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   RSVVALGLTHRFRSKFVTVVLYKPARRRGM 92
           RS+VALGLTHRFRSKFVTVVLYKPARRRGM
Sbjct: 97  RSMVALGLTHRFRSKFVTVVLYKPARRRGM 126


>gb|EXC31764.1| SNF1-related protein kinase regulatory subunit beta-3 [Morus
           notabilis]
          Length = 116

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +3

Query: 3   RSVVALGLTHRFRSKFVTVVLYKPARRRG 89
           RSVVALG THRFRSKFVTVVLYKP +RRG
Sbjct: 84  RSVVALGFTHRFRSKFVTVVLYKPVQRRG 112


>gb|EMJ07356.1| hypothetical protein PRUPE_ppa013534mg [Prunus persica]
          Length = 117

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +3

Query: 3   RSVVALGLTHRFRSKFVTVVLYKPARRRG 89
           RSVVALG THRFRSKFVTVVLYKP +RRG
Sbjct: 85  RSVVALGFTHRFRSKFVTVVLYKPVQRRG 113


Top