BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027932
         (547 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_006356988.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_004229569.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|ESW14398.1| hypothetical protein PHAVU_008G277600g, partial [...   107   2e-21
ref|XP_006296956.1| hypothetical protein CARUB_v10012947mg [Caps...   106   3e-21
ref|XP_002882500.1| pentatricopeptide repeat-containing protein ...   106   3e-21
ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arab...   106   3e-21
ref|NP_187348.1| pentatricopeptide repeat-containing protein [Ar...   106   3e-21
ref|XP_003617758.1| Pentatricopeptide repeat-containing protein ...   106   4e-21
ref|XP_006407890.1| hypothetical protein EUTSA_v10020026mg [Eutr...   105   5e-21
ref|XP_006840527.1| hypothetical protein AMTR_s00045p00208290 [A...   105   5e-21
ref|XP_006419574.1| hypothetical protein CICLE_v10007037mg [Citr...   103   2e-20
ref|XP_004491497.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_002516925.1| pentatricopeptide repeat-containing protein,...   103   3e-20
gb|EXB74774.1| hypothetical protein L484_023516 [Morus notabilis]     102   5e-20
ref|XP_002314384.2| hypothetical protein POPTR_0010s01780g [Popu...   102   5e-20
gb|EOY06521.1| Pentatricopeptide repeat-containing protein, puta...   101   1e-19
ref|XP_004296842.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ N  LFT+L+  FAR+G++     LLD+MKS+  D +IV YNVCID FGKAGK+DM+W
Sbjct: 226 YEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSW 285

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMKS G+ PD+VTYT+MI
Sbjct: 286 KFFHEMKSHGLMPDDVTYTSMI 307


>ref|XP_006356988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like isoform X1 [Solanum tuberosum]
           gi|565381249|ref|XP_006356989.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g06920-like isoform X2 [Solanum tuberosum]
          Length = 920

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/82 (60%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ N  LFT+++  FAR+G++     LLD+MKS+  D +IV YNVCID FGKAGK+DMAW
Sbjct: 248 YEVNVHLFTTVIRAFAREGRVDAALSLLDEMKSNAFDADIVLYNVCIDCFGKAGKVDMAW 307

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+K+ GI PD+VTYT+MI
Sbjct: 308 KFFHELKAHGILPDDVTYTSMI 329


>ref|XP_004229569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Solanum lycopersicum]
          Length = 920

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/82 (60%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ N  LFT+++  FAR+G++     LLD+MKS+  D +IV YNVCID FGKAGK+DMAW
Sbjct: 248 YEVNVHLFTTVIRAFAREGRVDAALSLLDEMKSNAFDADIVLYNVCIDCFGKAGKVDMAW 307

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+K+ GI PD+VTYT+MI
Sbjct: 308 KFFHELKAHGILPDDVTYTSMI 329


>gb|ESW14398.1| hypothetical protein PHAVU_008G277600g, partial [Phaseolus
           vulgaris]
          Length = 911

 Score =  107 bits (266), Expect = 2e-21
 Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSDDTN--IVFYNVCIDAFGKAGKLDMAW 479
           Y+ +  LFT+L+  FAR G++     LLD+MKS+  N  IV YNVCID FGK GKLDMAW
Sbjct: 239 YEVSVHLFTTLIRVFARDGRIDAALSLLDEMKSNSFNADIVLYNVCIDCFGKVGKLDMAW 298

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMKS+G+ PD+VTYT+MI
Sbjct: 299 KFFHEMKSQGLMPDDVTYTSMI 320


>ref|XP_006296956.1| hypothetical protein CARUB_v10012947mg [Capsella rubella]
           gi|482565665|gb|EOA29854.1| hypothetical protein
           CARUB_v10012947mg [Capsella rubella]
          Length = 885

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+P   LFT+L+  FA++G++     LLD+MKS   D +IV YNVCID+FGK GK+DMAW
Sbjct: 213 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 272

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+++ G+ PDEVTYT+MI
Sbjct: 273 KFFHEIEANGLKPDEVTYTSMI 294


>ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328340|gb|EFH58759.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 871

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+P   LFT+L+  FA++G++     LLD+MKS   D +IV YNVCID+FGK GK+DMAW
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+++ G+ PDEVTYT+MI
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMI 280


>ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
           lyrata] gi|297308523|gb|EFH39054.1| hypothetical protein
           ARALYDRAFT_359368 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+P   LFT+L+  FA++G++     LLD+MKS   D +IV YNVCID+FGK GK+DMAW
Sbjct: 213 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 272

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+++ G+ PDEVTYT+MI
Sbjct: 273 KFFHEIEANGLKPDEVTYTSMI 294


>ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75186627|sp|Q9M907.1|PP217_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g06920 gi|6728999|gb|AAF26996.1|AC016827_7
           hypothetical protein [Arabidopsis thaliana]
           gi|332640955|gb|AEE74476.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+P   LFT+L+  FA++G++     LLD+MKS   D +IV YNVCID+FGK GK+DMAW
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+++ G+ PDEVTYT+MI
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMI 280


>ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519093|gb|AET00717.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  106 bits (264), Expect = 4e-21
 Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSDD--TNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ N  LFT+LV  FAR+G++     LLD+MKS+    ++V YNVCID FGK GK+DMAW
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMK++G+ PD+VTYTT+I
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLI 315


>ref|XP_006407890.1| hypothetical protein EUTSA_v10020026mg [Eutrema salsugineum]
           gi|557109036|gb|ESQ49343.1| hypothetical protein
           EUTSA_v10020026mg [Eutrema salsugineum]
          Length = 885

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/82 (58%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+P   LFT+L+  FA++G++     LLD+MKS   D +I  YNVCID FGK GK+DMAW
Sbjct: 213 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIFLYNVCIDCFGKVGKVDMAW 272

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEM++ G+ PDEVTYT+MI
Sbjct: 273 KFFHEMEASGLKPDEVTYTSMI 294


>ref|XP_006840527.1| hypothetical protein AMTR_s00045p00208290 [Amborella trichopoda]
           gi|548842245|gb|ERN02202.1| hypothetical protein
           AMTR_s00045p00208290 [Amborella trichopoda]
          Length = 892

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ +  LFT+LV  FA+ G+L     LL++MKS+  D ++V YNVCID FGK GK+DMAW
Sbjct: 220 YEVSVQLFTTLVRIFAKDGRLDAALSLLEEMKSNSIDADLVLYNVCIDCFGKVGKVDMAW 279

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMK++G+ PD+VTYTTMI
Sbjct: 280 KFFHEMKAQGLKPDDVTYTTMI 301


>ref|XP_006419574.1| hypothetical protein CICLE_v10007037mg [Citrus clementina]
           gi|557521447|gb|ESR32814.1| hypothetical protein
           CICLE_v10007037mg [Citrus clementina]
          Length = 666

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ +  LFT+L+  FAR+G++     LLD+MK++    +IV YNVCID FGK GK+DMAW
Sbjct: 41  YEVSVHLFTTLIRVFAREGRVDDALFLLDEMKNNAFSADIVLYNVCIDCFGKVGKVDMAW 100

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMK++G++PD+VTYT+MI
Sbjct: 101 KFFHEMKAQGVAPDDVTYTSMI 122


>ref|XP_004491497.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like isoform X1 [Cicer arietinum]
           gi|502099516|ref|XP_004491498.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g06920-like isoform X2 [Cicer arietinum]
          Length = 905

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSDD--TNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ N  LFT+LV  F+R+G++     LLD+MKS+    ++V YNVCID FGK GK+DMAW
Sbjct: 233 YEANVQLFTTLVRVFSREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 292

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMK++G+ PD+VTYT++I
Sbjct: 293 KFFHEMKAQGLVPDDVTYTSLI 314


>ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544013|gb|EEF45539.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 901

 Score =  103 bits (257), Expect = 3e-20
 Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ +  LFT+++  FAR+G+L     LLD+MKS+    +IV YNVCID FGKAGK+DMAW
Sbjct: 229 YEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAW 288

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+KS G+ PD+VTYT+MI
Sbjct: 289 KFFHEIKSHGLLPDDVTYTSMI 310


>gb|EXB74774.1| hypothetical protein L484_023516 [Morus notabilis]
          Length = 417

 Score =  102 bits (255), Expect = 5e-20
 Identities = 47/82 (57%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ +  LFT+++  FAR+G++     LLD+MKS+  D +IV YNVCID FGK GK+DMAW
Sbjct: 250 YEVSVHLFTTVIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKVGKVDMAW 309

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEM++ G+ PD+VTYT+MI
Sbjct: 310 KFFHEMQAHGLRPDDVTYTSMI 331


>ref|XP_002314384.2| hypothetical protein POPTR_0010s01780g [Populus trichocarpa]
           gi|550328882|gb|EEF00555.2| hypothetical protein
           POPTR_0010s01780g [Populus trichocarpa]
          Length = 898

 Score =  102 bits (255), Expect = 5e-20
 Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ N  L T+L+  F+R+G++     LLD+MKS+  D +IV YNVCID FGK GK+DMAW
Sbjct: 226 YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 285

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMK+ G+ PD+VTYT+M+
Sbjct: 286 KFFHEMKANGLVPDDVTYTSMM 307


>gb|EOY06521.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 901

 Score =  101 bits (252), Expect = 1e-19
 Identities = 46/82 (56%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y+ +  LFT+L+  FA++G++     LLD+MKS+  + +IV YNVCID FGK GK+DMAW
Sbjct: 229 YEVSVHLFTTLIRGFAKEGRVDAALSLLDEMKSNSFEADIVLYNVCIDCFGKVGKVDMAW 288

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE K++G+ PD+VTYT+MI
Sbjct: 289 KFFHETKAQGLIPDDVTYTSMI 310


>ref|XP_004296842.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Fragaria vesca subsp. vesca]
          Length = 896

 Score =  101 bits (252), Expect = 1e-19
 Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSDDTN--IVFYNVCIDAFGKAGKLDMAW 479
           Y+    LFT+L+  FA++G++     LLD+MKS+  N  IV YNVCID FGK GK+DMAW
Sbjct: 224 YEVTVHLFTTLIRVFAKEGRVDAALSLLDEMKSNSCNADIVLYNVCIDCFGKVGKVDMAW 283

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEM+  G+ PD+VTYT+MI
Sbjct: 284 KFFHEMRMNGLMPDDVTYTSMI 305


>ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  101 bits (252), Expect = 1e-19
 Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSD--DTNIVFYNVCIDAFGKAGKLDMAW 479
           Y  N  LFT+L+  FAR+G++     LLD+MKS+  + ++V YNVCID FGKAGK+DMAW
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAW 290

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHEMK+ G+  D+VTYT+MI
Sbjct: 291 KFFHEMKANGLVLDDVTYTSMI 312


>ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
 Frame = +3

Query: 306 YQPN*SLFTSLVHDFARQGKLSITALLLDDMKSDDTN--IVFYNVCIDAFGKAGKLDMAW 479
           Y+    LFT+L+  FAR+G++     LLD+MKS+  N  +V YNVCID FGK GK+DMAW
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 480 KFFHEMKSKGISPDEVTYTTMI 545
           KFFHE+KS+G+ PD+VT+T+MI
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMI 314