BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027909
         (677 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_022164519.1| putative ATP-dependent DNA helicase PcrA [Eu...    99   9e-19
ref|WP_021267628.1| putative ATP-dependent DNA helicase PcrA [Ba...    97   3e-18
ref|WP_005362362.1| ATP-dependent DNA helicase PcrA [Eubacterium...    96   1e-17
ref|WP_022060508.1| aTP-dependent DNA helicase PcrA [Corallococc...    95   2e-17
ref|WP_022077586.1| aTP-dependent DNA helicase PcrA [Clostridium...    94   3e-17
ref|WP_010453978.1| ATP-dependent DNA helicase Rep [Succinivibri...    92   1e-16
dbj|BAJ96519.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   1e-16
gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare]          92   1e-16
gb|EKD32997.1| hypothetical protein ACD_76C00106G0038 [unculture...    92   2e-16
ref|WP_017213589.1| ATPase AAA [Leptospira noguchii] gi|52932915...    91   3e-16
ref|WP_004453329.1| putative ATP-dependent helicase PcrA [Leptos...    91   3e-16
ref|WP_002176630.1| putative ATP-dependent helicase PcrA [Leptos...    91   3e-16
ref|WP_004437166.1| putative ATP-dependent helicase PcrA [Leptos...    91   3e-16
ref|WP_004428287.1| putative ATP-dependent helicase PcrA [Leptos...    91   3e-16
ref|WP_004450752.1| putative ATP-dependent helicase PcrA [Leptos...    91   3e-16
ref|WP_004423617.1| ATPase AAA [Leptospira noguchii] gi|41078353...    91   3e-16
gb|ETT47943.1| ATP-dependent DNA helicase [Paenibacillus sp. FSL...    91   4e-16
ref|WP_020146913.1| hypothetical protein [Verrucomicrobia bacter...    90   6e-16
ref|XP_006658570.1| PREDICTED: ATP-dependent DNA helicase srs2-l...    90   7e-16
ref|WP_019107368.1| ATP-dependent DNA helicase PcrA [Peptoniphil...    90   7e-16

>ref|WP_022164519.1| putative ATP-dependent DNA helicase PcrA [Eubacterium sp. CAG:192]
           gi|524360611|emb|CDB12354.1| putative ATP-dependent DNA
           helicase PcrA [Eubacterium sp. CAG:192]
          Length = 773

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
 Frame = +3

Query: 27  IDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQ 206
           + F    + V TFHS C+ +LR + +  G S +F ++    Q  L++N++       K  
Sbjct: 76  VGFGAEQVWVSTFHSACVRILRRYIDRIGYSTDFTIYDTDDQKRLMKNII-------KEL 128

Query: 207 SLHGKLFQSK--LGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNT 380
           +L+ K+++    LG  +++K  +L+T+G+  +  +        D + V + K        
Sbjct: 129 NLNTKIYKENAMLGKISDFKN-KLITTGDVAAMAR-------NDFKMVNISK-------- 172

Query: 381 ELDGRNDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFV 560
                        +   YQ+ + + N +DF+  +  T+    KCP VLE    R QYI V
Sbjct: 173 -------------IYDEYQEALKKNNALDFDDLIMKTVQLFNKCPEVLEGYQNRLQYIMV 219

Query: 561 DEFQDTDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           DE+QDT+  Q   ++ L  K+ ++ VVGDDDQ IY +RGA
Sbjct: 220 DEYQDTNAAQFAFIKQLASKNQNLCVVGDDDQSIYKFRGA 259


>ref|WP_021267628.1| putative ATP-dependent DNA helicase PcrA [Bacteriovorax sp. BAL6_X]
           gi|529050027|gb|EPZ50478.1| putative ATP-dependent DNA
           helicase PcrA [Bacteriovorax sp. BAL6_X]
          Length = 743

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
 Frame = +3

Query: 27  IDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQ 206
           +  DV  ++V TFHSFC  +LR+   Y GLS NF ++    Q  +++ ++      R+  
Sbjct: 74  VSCDVGALQVTTFHSFCAKMLRSEANYLGLSRNFTIYDTSEQKSVVKAILN-----RRGI 128

Query: 207 SLHGKLFQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTEL 386
           S                          +K    ++ + F++DL+N      + D ++ + 
Sbjct: 129 S--------------------------QKETAPSEVLYFIEDLKNHGHYP-DRDISDKDY 161

Query: 387 DGRNDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDE 566
           +  +D++F    L+ Y+K + +AN  DF   +   +   +K   VLE    R +YI VDE
Sbjct: 162 EVESDDIFYDMYLE-YEKELHKANATDFGGLICGVIQLFEKFSEVLERYQDRFRYILVDE 220

Query: 567 FQDTDIDQLELLRNLG-KDGHITVVGDDDQQIYSWRGA 677
           +QDT+  Q +L+  L  K  +I VVGD+DQ IYSWRGA
Sbjct: 221 YQDTNRAQFDLVTKLAIKRRNICVVGDEDQSIYSWRGA 258


>ref|WP_005362362.1| ATP-dependent DNA helicase PcrA [Eubacterium ventriosum]
           gi|149736050|gb|EDM51936.1| putative ATP-dependent DNA
           helicase PcrA [Eubacterium ventriosum ATCC 27560]
          Length = 780

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 3/220 (1%)
 Frame = +3

Query: 27  IDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQ 206
           + F    + V TFHS C+ +LR + +  G S +F ++  + Q  LL++V+       K  
Sbjct: 79  VGFGAEQVWVSTFHSACVRILRRYIDRIGYSNDFTIYDTEDQKKLLKDVI-------KNL 131

Query: 207 SLHGKLFQSK--LGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNT 380
           +L  K+++    LG  +++K  +L+T+G      ++       D + + L K  N     
Sbjct: 132 NLDPKMYKENAVLGKISDFKN-KLVTTGEVAQMAQS-------DFKLLNLSKIYN----- 178

Query: 381 ELDGRNDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFV 560
                           NYQ+ + + N +DF+  +  T+   +KCP VLES   R +YI V
Sbjct: 179 ----------------NYQEALKKNNALDFDDLIMKTVHLFRKCPEVLESYQERLKYIMV 222

Query: 561 DEFQDTDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           DE+QDT+  Q   ++ L  K  ++ VVGDDDQ IY +RGA
Sbjct: 223 DEYQDTNGAQFAFIKLLASKYQNLCVVGDDDQSIYKFRGA 262


>ref|WP_022060508.1| aTP-dependent DNA helicase PcrA [Corallococcus sp. CAG:1435]
           gi|524228396|emb|CCZ95568.1| aTP-dependent DNA helicase
           PcrA [Corallococcus sp. CAG:1435]
          Length = 745

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
 Frame = +3

Query: 30  DFDVND--IRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKA 203
           DF  N   + + T HSFC +VLR      G + NF ++  + +  LL+ +  +++ +  A
Sbjct: 72  DFQCNAQFMHISTIHSFCATVLRRESSALGRNSNFSIYDEEDKKSLLKKIAREFWDECDA 131

Query: 204 QSLHGKLFQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTE 383
           +++  KL +      NN     +L S N    ++      L +    QL + +    ++ 
Sbjct: 132 KNVD-KLSEGISSMKNNLTSTDMLDSANT---VEESLDATLDEYIESQLEQLSQSAQSSR 187

Query: 384 LDGRNDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVD 563
            D          ++  Y + + + N +DF+  +        + P +LE    R +YI +D
Sbjct: 188 EDLLK-------IISQYNEKMQQNNALDFDDLLYFVHKLFSRFPDILEKYRERYKYILID 240

Query: 564 EFQDTDIDQLELLRNLG-KDGHITVVGDDDQQIYSWRGA 677
           EFQDT+  Q E+ R LG K G+I VVGDDDQ IYSWRGA
Sbjct: 241 EFQDTNKVQYEIFRLLGEKYGNIFVVGDDDQSIYSWRGA 279


>ref|WP_022077586.1| aTP-dependent DNA helicase PcrA [Clostridium sp. CAG:571]
           gi|524252430|emb|CDA16337.1| aTP-dependent DNA helicase
           PcrA [Clostridium sp. CAG:571]
          Length = 768

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
 Frame = +3

Query: 42  NDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGK 221
           NDI +GTFHS C+ +LR + +  G   +F++F    Q  L+++ +       K   +  K
Sbjct: 81  NDIWMGTFHSICVRILRRYIDRIGFDSSFIIFDTSDQRTLVKDCL-------KELKVDDK 133

Query: 222 LFQSK--LGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGR 395
           LF  +  L + +N K E L          KA ++++  D R   + K             
Sbjct: 134 LFTDRAVLSEISNAKNEMLEP--------KAYSVKYANDFRKETIGK------------- 172

Query: 396 NDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
                   V + YQK + E N +DF+  +  T+  L +   VLE    + +Y+ VDE+QD
Sbjct: 173 --------VYELYQKRLRENNAIDFDDIINYTIKILTENQDVLEYYTEKFKYVLVDEYQD 224

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q  L+  L  K G+ITVVGD+DQ IYS+RGA
Sbjct: 225 TNKAQFMLISILASKYGNITVVGDNDQGIYSFRGA 259


>ref|WP_010453978.1| ATP-dependent DNA helicase Rep [Succinivibrionaceae bacterium WG-1]
          Length = 676

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
 Frame = +3

Query: 39  VNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHG 218
           +  +RV TFHS  L ++R   +  GL   F +F    Q  +++ +++ + A         
Sbjct: 76  IKGLRVSTFHSLGLEIIRNEFKTIGLRKGFSLFDEYDQHSVIKEILQKFSAN-------- 127

Query: 219 KLFQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQ--LLKANNDTTNTELDG 392
                   D++   KE++L   N+ S       +F  DL      L  AN+D T      
Sbjct: 128 --------DTSEEIKEKVLDCSNKIS-------KFKNDLLTPDEVLALANDDYTQ----- 167

Query: 393 RNDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQ 572
                F   + + YQ+C++  N +DF+  +   +   ++   V      R QY+ VDE+Q
Sbjct: 168 -----FFGLIYKEYQECLNSYNAIDFDDLIFIPVKLFERNEIVRSRWSRRIQYLLVDEYQ 222

Query: 573 DTDIDQLELLRNLGKD-GHITVVGDDDQQIYSWRGA 677
           DT++ Q +L++ L K+  H TVVGDDDQ IYSWRGA
Sbjct: 223 DTNLSQYKLIKLLVKEHQHFTVVGDDDQSIYSWRGA 258


>dbj|BAJ96519.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 774

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 67/211 (31%), Positives = 107/211 (50%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           +I + TFHSFCL + R   E  G +  F+++    Q      +VE   A+R  +  HGK 
Sbjct: 382 EIIISTFHSFCLQLCRTHAEKLGRTSEFIIYGHGQQR---RAIVE---AERLLE--HGK- 432

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
               LGD+           G+ K+  K KA ++L+ +   +    ++  T  E + + D 
Sbjct: 433 -SDGLGDAVKQ------CDGDIKNSFKDKAKKWLKFVTQAK----SSGQTPEEYEKKGDL 481

Query: 405 VFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQDTDI 584
             +  +L++Y + +   N +D++ F+  ++T L K P V +      Q I VDEFQDT  
Sbjct: 482 TGAS-ILRHYNEILVSCNALDYHDFINSSITLLTKFPEVYKECQTTCQAIVVDEFQDTSA 540

Query: 585 DQLELLRNLGKDGHITVVGDDDQQIYSWRGA 677
            Q  LL+ L    HIT+VGD+DQ I+S+ GA
Sbjct: 541 MQYFLLKLLASHNHITIVGDEDQSIFSFNGA 571


>gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare]
          Length = 1185

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 67/211 (31%), Positives = 107/211 (50%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           +I + TFHSFCL + R   E  G +  F+++    Q      +VE   A+R  +  HGK 
Sbjct: 382 EIIISTFHSFCLQLCRTHAEKLGRTSEFIIYGHGQQR---RAIVE---AERLLE--HGK- 432

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
               LGD+           G+ K+  K KA ++L+ +   +    ++  T  E + + D 
Sbjct: 433 -SDGLGDAVKQ------CDGDIKNSFKDKAKKWLKFVTQAK----SSGQTPEEYEKKGDL 481

Query: 405 VFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQDTDI 584
             +  +L++Y + +   N +D++ F+  ++T L K P V +      Q I VDEFQDT  
Sbjct: 482 TGAS-ILRHYNEILVSCNALDYHDFINSSITLLTKFPEVYKECQTTCQAIVVDEFQDTSA 540

Query: 585 DQLELLRNLGKDGHITVVGDDDQQIYSWRGA 677
            Q  LL+ L    HIT+VGD+DQ I+S+ GA
Sbjct: 541 MQYFLLKLLASHNHITIVGDEDQSIFSFNGA 571


>gb|EKD32997.1| hypothetical protein ACD_76C00106G0038 [uncultured bacterium]
          Length = 976

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           DI++ TFHSFC  +LR      GL+ +F + T           +  W   R+        
Sbjct: 83  DIQISTFHSFCEKILRDCGAEIGLASDFKLMTE----------LGAWLITRQNFDKFKLD 132

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQD--LRNVQLLKANNDTTNTELDGRN 398
           +   +G+   + K  L      K   +AK      D  ++  + +KA++D+ N++     
Sbjct: 133 YYKPMGNPTKFLKGLL------KHISRAKDENVSPDDYIKFAESIKADSDSNNSDESATE 186

Query: 399 DNVFSKWVLQ------NYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFV 560
           +   SK + +      +YQ+ + E + VDF   +   L   KK P VLE    + +YI V
Sbjct: 187 E---SKRICELADFYHSYQRILQENDSVDFGDLIMYALLLFKKRPRVLEQYRNKFEYILV 243

Query: 561 DEFQDTDIDQLELLRNLGK-DGHITVVGDDDQQIYSWRGA 677
           DEFQDT+  Q EL++ L     ++TVVGDDDQ IY +RGA
Sbjct: 244 DEFQDTNWAQYELIKMLASPKNNLTVVGDDDQSIYKFRGA 283


>ref|WP_017213589.1| ATPase AAA [Leptospira noguchii] gi|529329159|gb|EQA70289.1|
           putative ATP-dependent helicase PcrA [Leptospira
           noguchii serovar Panama str. CZ214]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>ref|WP_004453329.1| putative ATP-dependent helicase PcrA [Leptospira noguchii]
           gi|474496334|gb|EMS84271.1| putative ATP-dependent
           helicase PcrA [Leptospira noguchii str. Cascata]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>ref|WP_002176630.1| putative ATP-dependent helicase PcrA [Leptospira interrogans]
           gi|464383895|gb|EMO55430.1| putative ATP-dependent
           helicase PcrA [Leptospira interrogans str. HAI1536]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>ref|WP_004437166.1| putative ATP-dependent helicase PcrA [Leptospira noguchii]
           gi|464367515|gb|EMO41768.1| putative ATP-dependent
           helicase PcrA [Leptospira noguchii serovar Autumnalis
           str. ZUN142]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>ref|WP_004428287.1| putative ATP-dependent helicase PcrA [Leptospira noguchii]
           gi|464179279|gb|EMN01713.1| putative ATP-dependent
           helicase PcrA [Leptospira noguchii str. 2007001578]
           gi|464434307|gb|EMO91345.1| putative ATP-dependent
           helicase PcrA [Leptospira noguchii str. 2001034031]
           gi|512767098|gb|EPE83226.1| putative ATP-dependent
           helicase PcrA [Leptospira noguchii str. 1993005606]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>ref|WP_004450752.1| putative ATP-dependent helicase PcrA [Leptospira noguchii]
           gi|461479152|gb|EMI64292.1| putative ATP-dependent
           helicase PcrA [Leptospira noguchii str. Bonito]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>ref|WP_004423617.1| ATPase AAA [Leptospira noguchii] gi|410783538|gb|EKR72530.1|
           putative ATP-dependent helicase PcrA [Leptospira
           noguchii str. 2006001870] gi|474499985|gb|EMS87624.1|
           putative ATP-dependent helicase PcrA [Leptospira
           noguchii str. Hook]
          Length = 729

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           ++++ TFHS CL +LR    + G    F ++   +Q  LL+ V++D        SL  K 
Sbjct: 81  NVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLLKQVIKDL-------SLDPKF 133

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
           ++               T GN  S +K K +               +  +  E +GRND 
Sbjct: 134 YKPS-------------TLGNYISGLKDKML---------------SPESYLEKEGRND- 164

Query: 405 VFSKWV---LQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
            FSK V    + Y+K  D     DF   +  T+   +K   V+     + +Y+ VDE+QD
Sbjct: 165 -FSKAVSAIYKEYEKRKDANYAFDFGDLIWKTVQLFQKSSDVISKYRHKWEYVMVDEYQD 223

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  Q EL+  L G+ G++ VVGDDDQ IYSWRGA
Sbjct: 224 TNKVQYELVLLLAGEKGNLCVVGDDDQSIYSWRGA 258


>gb|ETT47943.1| ATP-dependent DNA helicase [Paenibacillus sp. FSL R7-269]
          Length = 293

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
 Frame = +3

Query: 36  DVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLH 215
           D   +R+GTFH+FC+ VL+A+ +   ++  F   +   Q+ LL++VV+    +RK +   
Sbjct: 30  DQKRLRIGTFHNFCMWVLKAYGDKINMNREFTFISTAHQMHLLQSVVKGTQLKRKPKDFK 89

Query: 216 GKLFQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGR 395
            ++ + K   S ++K     T    +    A A++                         
Sbjct: 90  SRISELK-NSSTDFKDYMDKTENGGEINFHAAAVE------------------------- 123

Query: 396 NDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQD 575
                       YQ+ ++  N +D++  +  T T  K+ P++LE       YI VDE QD
Sbjct: 124 ------------YQRRMNANNLIDYDDAILQTATLFKEKPSILELYQNAFPYILVDEMQD 171

Query: 576 TDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           T+  QLEL+R L  K  H+  V DDDQ IY WRGA
Sbjct: 172 TNRMQLELIRLLSSKAEHVMAVADDDQSIYGWRGA 206


>ref|WP_020146913.1| hypothetical protein [Verrucomicrobia bacterium SCGC AAA164-E04]
          Length = 681

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 2/214 (0%)
 Frame = +3

Query: 42  NDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGK 221
           N   + TFHSFC+ VLR + +  G   NFV++    QL  +  +  DW            
Sbjct: 89  NKPTICTFHSFCVRVLRRYIDKLGYKRNFVIYDQSDQLGTIRKLTSDW------------ 136

Query: 222 LFQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANN-DTTNTELDGRN 398
                              S +  +   A+ + FL  LRN   L++   D     L  R 
Sbjct: 137 -------------------SKSNINIKPAEWLGFLSRLRNTSSLESLGLDAATIRLAER- 176

Query: 399 DNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQDT 578
                  ++  Y+  +   N VDF+  +  TL    + P VL+S     +Y+ VDE+QDT
Sbjct: 177 -------LMTRYETALKACNAVDFDDLIILTLKLFNEHPEVLKSCREMYRYVMVDEYQDT 229

Query: 579 DIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           +  Q +L+  L  +  ++ VVGDDDQ IY WRGA
Sbjct: 230 NGKQFQLIHALTSEHRNLCVVGDDDQSIYGWRGA 263


>ref|XP_006658570.1| PREDICTED: ATP-dependent DNA helicase srs2-like [Oryza brachyantha]
          Length = 1175

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 66/211 (31%), Positives = 103/211 (48%)
 Frame = +3

Query: 45  DIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQSLHGKL 224
           +I + TFHSFCL + R   E  G +P F+++    Q      V+E       A+ L    
Sbjct: 372 EIIISTFHSFCLQLCRTHAEKLGRTPEFIIYGHGQQR---RAVIE-------AERLLEND 421

Query: 225 FQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTELDGRNDN 404
             + LG +  +       +G+ K+  K KA ++    + V   KA+  T   E   +  N
Sbjct: 422 INNDLGAAIKH------CNGDIKNSFKDKAKKWQ---KFVTQAKASGRTP--EEYEKKGN 470

Query: 405 VFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDEFQDTDI 584
           +    +L++Y + +   N +D++ F+  ++T L K P V E      Q I VDEFQDT  
Sbjct: 471 LTGASILRHYNEILRSCNALDYHDFINSSITLLTKFPEVYEECQNTWQAIVVDEFQDTST 530

Query: 585 DQLELLRNLGKDGHITVVGDDDQQIYSWRGA 677
            Q  LL+ L     IT+VGD+DQ I+S+ GA
Sbjct: 531 MQYYLLKTLASHNRITIVGDEDQSIFSFNGA 561


>ref|WP_019107368.1| ATP-dependent DNA helicase PcrA [Peptoniphilus senegalensis]
          Length = 731

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
 Frame = +3

Query: 27  IDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWYAQRKAQ 206
           ID D++ + +GTFHS C+ +LR   E  G + NF ++    Q+ +++  + +        
Sbjct: 74  IDRDISSMWIGTFHSICVRILRRNIERIGYNGNFTIYDRDDQITVVKEAIAELSI----- 128

Query: 207 SLHGKLFQSKLGDSNNYKKERLLTSGNEKSFIKAKAIQFLQDLRNVQLLKANNDTTNTEL 386
                       D + YK   ++   N+ S IK++ I        ++ ++AN D    E 
Sbjct: 129 ------------DRDIYKPRAII---NDISNIKSEGIS------PIEYIEANKDNFFKEN 167

Query: 387 DGRNDNVFSKWVLQNYQKCIDEANGVDFNSFVRCTLTTLKKCPTVLESAGFRPQYIFVDE 566
            G+        +   Y+K + + N +DF+  +  T+  LK    + +    + +YIFVDE
Sbjct: 168 LGK--------IYDLYEKKLRKNNALDFDDLLIKTVDILKSEEDIRDFYRDKFEYIFVDE 219

Query: 567 FQDTDIDQLELLRNL-GKDGHITVVGDDDQQIYSWRGA 677
           +QDT+  Q EL++ + G   ++TVVGD+DQ IY WRGA
Sbjct: 220 YQDTNKIQYELIKLIAGTKPNLTVVGDNDQSIYKWRGA 257