BLASTX nr result
ID: Ephedra28_contig00027868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00027868
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC27333.1| putative A-like cyclin [Picea abies] 75 7e-12
ref|XP_006829270.1| hypothetical protein AMTR_s00001p00272790 [A... 65 7e-09
ref|NP_001237783.1| mitotic cyclin a2-type [Glycine max] gi|8573... 63 4e-08
ref|XP_006577871.1| PREDICTED: mitotic cyclin a2-type isoform X1... 63 4e-08
ref|XP_001766438.1| predicted protein [Physcomitrella patens] gi... 63 4e-08
dbj|BAA11560.1| cyclin [Adiantum capillus-veneris] 63 5e-08
ref|XP_001778367.1| predicted protein [Physcomitrella patens] gi... 62 8e-08
ref|XP_001764427.1| predicted protein [Physcomitrella patens] gi... 61 2e-07
dbj|BAA20410.1| A-type cyclin [Catharanthus roseus] 60 4e-07
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan] 59 5e-07
gb|AFK47820.1| unknown [Lotus japonicus] 59 7e-07
ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium di... 59 7e-07
ref|XP_001764550.1| predicted protein [Physcomitrella patens] gi... 59 7e-07
ref|XP_004290942.1| PREDICTED: cyclin-A3-2-like [Fragaria vesca ... 59 9e-07
ref|XP_006664680.1| PREDICTED: cyclin-A3-2-like, partial [Oryza ... 58 1e-06
ref|XP_002301157.1| cyclin A3.1 family protein [Populus trichoca... 58 1e-06
ref|XP_006596120.1| PREDICTED: cyclin-A2-2-like isoform X1 [Glyc... 58 1e-06
ref|XP_006374858.1| cyclin A3.1 family protein [Populus trichoca... 58 1e-06
ref|XP_002442399.1| hypothetical protein SORBIDRAFT_08g019410 [S... 58 1e-06
ref|XP_002327190.1| predicted protein [Populus trichocarpa] 58 1e-06
>emb|CAC27333.1| putative A-like cyclin [Picea abies]
Length = 380
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILP 208
NS LQHYTGY+ SD ++CICAI+D LN+KGC L +R+ Y Q K KC AN+ P
Sbjct: 313 NSTLQHYTGYKVSDMRDCICAIHDLQLNRKGCTLAAIRDKYNQPKFKCVANLFP 366
>ref|XP_006829270.1| hypothetical protein AMTR_s00001p00272790 [Amborella trichopoda]
gi|548834249|gb|ERM96686.1| hypothetical protein
AMTR_s00001p00272790 [Amborella trichopoda]
Length = 361
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -3
Query: 366 SILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILP 208
S LQHYTGY+ SD K+C+ AI+ LN KGC L +R+ Y+ HK KC +++ P
Sbjct: 295 STLQHYTGYKSSDLKDCVIAIHSLQLNTKGCSLAAIRDKYKSHKFKCVSSLSP 347
>ref|NP_001237783.1| mitotic cyclin a2-type [Glycine max] gi|857395|dbj|BAA09465.1|
mitotic cyclin a2-type [Glycine max]
Length = 469
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDL 190
N L+HYT Y+ SD K + A+ D LN KGC L +RE Y+Q K C AN+ P ++ L
Sbjct: 405 NPTLEHYTKYKASDLKTVVLALQDLQLNTKGCFLNAVREKYKQQKFNCVANLSPKSVQSL 464
Query: 189 F 187
F
Sbjct: 465 F 465
>ref|XP_006577871.1| PREDICTED: mitotic cyclin a2-type isoform X1 [Glycine max]
gi|571448503|ref|XP_006577872.1| PREDICTED: mitotic
cyclin a2-type isoform X2 [Glycine max]
Length = 488
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDL 190
N L+HYT Y+ SD K + A+ D LN KGC L +RE Y+Q K C AN+ P ++ L
Sbjct: 405 NPTLEHYTKYKASDLKTVVLALQDLQLNTKGCFLNAVREKYKQQKFNCVANLSPKSVQSL 464
Query: 189 F 187
F
Sbjct: 465 F 465
>ref|XP_001766438.1| predicted protein [Physcomitrella patens]
gi|162682347|gb|EDQ68766.1| predicted protein
[Physcomitrella patens]
Length = 282
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDL 190
++ LQHYTGY S+ ++C+ A+++ N +GC L +RE YR HK KC A ++P AL
Sbjct: 216 DATLQHYTGYRPSELEQCVRAMHELQCNTRGCTLPAVREKYRHHKFKCVAALVPPALLPE 275
Query: 189 FSFKEV 172
F+E+
Sbjct: 276 EYFREL 281
>dbj|BAA11560.1| cyclin [Adiantum capillus-veneris]
Length = 532
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLA 202
NS LQHY+GY+ S+ KEC AI + N K C L +RE YRQHK KC A + P A
Sbjct: 466 NSTLQHYSGYKASELKECAKAILELQKNTKNCTLPAIREKYRQHKFKCVATLHPPA 521
>ref|XP_001778367.1| predicted protein [Physcomitrella patens]
gi|162670246|gb|EDQ56818.1| predicted protein
[Physcomitrella patens]
Length = 272
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDL 190
++ LQHYTGY S+ ++C+ A+++ N +GC L +RE YR HK KC A ++P A+
Sbjct: 206 DATLQHYTGYRPSELEQCVRAMHELQCNTRGCTLPAVREKYRHHKFKCVAALVPPAVLPE 265
Query: 189 FSFKEV 172
F+E+
Sbjct: 266 EYFREL 271
>ref|XP_001764427.1| predicted protein [Physcomitrella patens]
gi|162684291|gb|EDQ70694.1| predicted protein
[Physcomitrella patens]
Length = 237
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3
Query: 360 LQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDLFSF 181
LQHYTGY+ SD ++C+ I+D N K C L +RE YR HK KC A + P ++ F
Sbjct: 172 LQHYTGYKASDLEKCVRLIHDLQRNTKNCTLPAIREKYRNHKFKCVATLTPPSVLPPEFF 231
Query: 180 KE 175
K+
Sbjct: 232 KD 233
>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANI-LPLALSD 193
NS+LQH +GY+ +D KEC+ I+D L+K+G L +R+ Y+QHK KC + + P ++ D
Sbjct: 307 NSLLQHNSGYKPADLKECVLIIHDLQLSKRGSSLVAVRDKYKQHKFKCVSTLTAPPSIPD 366
Query: 192 LF 187
F
Sbjct: 367 EF 368
>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
Length = 382
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANI 214
NS LQ Y+GY+ SD KEC+ I+D L+++G L +RE Y+QHK KC A +
Sbjct: 300 NSALQQYSGYKTSDIKECVLIIHDLYLSRRGGALQAVREKYKQHKFKCVATL 351
>gb|AFK47820.1| unknown [Lotus japonicus]
Length = 86
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDL 190
N L+HYT Y+ S+ K + A+ D LN KGC L +RE Y+ K C AN+ P + L
Sbjct: 22 NPTLEHYTNYKSSELKTVVLALQDLQLNTKGCPLNAIREKYKHQKFNCVANLSPKPVQSL 81
Query: 189 F 187
F
Sbjct: 82 F 82
>ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium distachyon]
Length = 381
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 360 LQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILP 208
+Q TGY+ S+ K+CI AI+D LN+KG LT +R+ Y+QH+ KC + +LP
Sbjct: 318 MQKLTGYKASELKDCIRAIHDLQLNRKGLSLTAIRDKYKQHRFKCVSTLLP 368
>ref|XP_001764550.1| predicted protein [Physcomitrella patens]
gi|162684128|gb|EDQ70532.1| predicted protein
[Physcomitrella patens]
Length = 234
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILP 208
++ LQHYTGY S+ ++C+ I+D N K C L +RE YR HK KC A + P
Sbjct: 169 DATLQHYTGYRASELEKCVRIIHDLQRNTKNCTLPAIREKYRHHKFKCVATLTP 222
>ref|XP_004290942.1| PREDICTED: cyclin-A3-2-like [Fragaria vesca subsp. vesca]
Length = 355
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Frame = -3
Query: 366 SILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANI-----LPLA 202
S LQHYTGY+ +D K+C+ ++D L ++G +L +RE Y+QHK K AN+ LP
Sbjct: 289 STLQHYTGYKAADLKDCVVVLHDLYLGRRGGLLQVVREKYKQHKFKYVANLPCPPELPAP 348
Query: 201 LSD 193
L D
Sbjct: 349 LFD 351
>ref|XP_006664680.1| PREDICTED: cyclin-A3-2-like, partial [Oryza brachyantha]
Length = 279
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -3
Query: 360 LQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILP 208
+Q TGY+ S+ KECI AI+D LN+K LT +R+ Y+QHK KC + +LP
Sbjct: 215 MQKLTGYKVSELKECITAIHDLQLNRKYSSLTAIRDKYKQHKFKCVSTLLP 265
>ref|XP_002301157.1| cyclin A3.1 family protein [Populus trichocarpa]
gi|222842883|gb|EEE80430.1| cyclin A3.1 family protein
[Populus trichocarpa]
Length = 360
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANI-LPLALSD 193
+S LQ YTGY+ +D +EC+ I+D L+++G L +RE Y+QHK KC AN+ P L
Sbjct: 295 SSTLQQYTGYKAADLRECVLIIHDLYLSRRGGGLQAVREKYKQHKFKCVANMPSPPELPA 354
Query: 192 LFSFKEV 172
L+ F+EV
Sbjct: 355 LY-FEEV 360
>ref|XP_006596120.1| PREDICTED: cyclin-A2-2-like isoform X1 [Glycine max]
Length = 461
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILPLALSDL 190
NS ++HYT Y+ S+ K + A+ D L+ KGC L +RE Y+Q K K AN+ P + L
Sbjct: 385 NSTMEHYTNYKVSELKTTVLALADLQLDTKGCSLNAIREKYKQQKFKSVANLSPKPVQSL 444
Query: 189 FSFKEVTF*DLH 154
F + T D +
Sbjct: 445 FEAQVKTVNDAY 456
>ref|XP_006374858.1| cyclin A3.1 family protein [Populus trichocarpa]
gi|550323165|gb|ERP52655.1| cyclin A3.1 family protein
[Populus trichocarpa]
Length = 363
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANI 214
+S LQ YTGY+ +D K+C+ I+D L+++G L +RE Y+QHK KC AN+
Sbjct: 298 SSTLQQYTGYKATDLKDCVLIIHDLYLSRRGGGLQAVREKYKQHKFKCVANM 349
>ref|XP_002442399.1| hypothetical protein SORBIDRAFT_08g019410 [Sorghum bicolor]
gi|241943092|gb|EES16237.1| hypothetical protein
SORBIDRAFT_08g019410 [Sorghum bicolor]
Length = 428
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANILP 208
N+ LQ TGY+ SD K+CI AI+D LN+K L +R+ Y+QHK KC + +LP
Sbjct: 361 NTKLQKMTGYKVSDLKDCIVAIHDLQLNRKCPSLMAIRDKYKQHKFKCVSTLLP 414
>ref|XP_002327190.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -3
Query: 369 NSILQHYTGYEESDWKECICAINDF*LNKKGCILTTMRENYRQHKLKCHANI 214
+S LQ YTGY+ +D K+C+ I+D L+++G L +RE Y+QHK KC AN+
Sbjct: 298 SSTLQQYTGYKATDLKDCVLIIHDLYLSRRGGGLQAVREKYKQHKFKCVANM 349