BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027773
         (454 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006406104.1| hypothetical protein EUTSA_v10020060mg [Eutr...   109   3e-22
ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_002887500.1| pentatricopeptide repeat-containing protein ...   108   7e-22
gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis]     108   1e-21
ref|XP_006841750.1| hypothetical protein AMTR_s00003p00261700 [A...   107   2e-21
ref|NP_177512.1| pentatricopeptide repeat-containing protein [Ar...   107   2e-21
ref|XP_006390515.1| hypothetical protein EUTSA_v10019624mg, part...   105   5e-21
ref|XP_006838892.1| hypothetical protein AMTR_s00002p00268520 [A...   105   5e-21
ref|XP_002885540.1| pentatricopeptide repeat-containing protein ...   105   8e-21
ref|XP_002863007.1| pentatricopeptide repeat-containing protein ...   105   8e-21
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   104   1e-20
ref|NP_188942.1| pentatricopeptide repeat-containing protein [Ar...   104   1e-20
ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Popu...   104   1e-20
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   104   1e-20
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Caps...   103   3e-20
ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20

>ref|XP_006406104.1| hypothetical protein EUTSA_v10020060mg [Eutrema salsugineum]
           gi|557107250|gb|ESQ47557.1| hypothetical protein
           EUTSA_v10020060mg [Eutrema salsugineum]
          Length = 843

 Score =  109 bits (273), Expect = 3e-22
 Identities = 58/131 (44%), Positives = 85/131 (64%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + LE+NVMIKAYGI K   KA +LFE M + GV  D+ TY T++QI A+  + + +RG L
Sbjct: 506 TVLEYNVMIKAYGIGKSCEKACELFESMMSYGVTPDKCTYNTLVQILASSDMPDKARGYL 565

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           EKM  TG V D   +  +I+++ +  +   AEE+Y+ M+D  IE DV +YG LIN FA+ 
Sbjct: 566 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVDFNIEPDVVVYGVLINAFADT 625

Query: 36  GCMEKAAHYFQ 4
           G +++A  Y +
Sbjct: 626 GNVQEAMSYVE 636



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/132 (30%), Positives = 66/132 (50%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           +T+ FN MI  YG     G+   L ++M+ Q  L D  TY  +I +    + +E +    
Sbjct: 334 TTVTFNTMIHMYGNNGQLGEVSSLMKMMKLQ-CLPDTRTYNILISLHTKNNDIEKAGAYF 392

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           ++M + GL PD   +R L+ A+       EAEE+   M    +E+D     AL  ++ EA
Sbjct: 393 KEMKDAGLKPDPVSYRTLLYAFSIRHMVEEAEELVAEMDGNDVEIDEYTQSALTRMYIEA 452

Query: 36  GCMEKAAHYFQR 1
             +EK+  +F+R
Sbjct: 453 EMIEKSWSWFKR 464


>ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Fragaria vesca subsp. vesca]
          Length = 840

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/129 (41%), Positives = 87/129 (67%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           S +EFNVMIKAYG+ K + +A +LF+ ME+ GV+ DR +Y ++IQI A+  +   +R  L
Sbjct: 506 SVVEFNVMIKAYGVGKQYSRACQLFDSMESHGVIPDRCSYSSLIQILASGDMPHTARPYL 565

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           +KM  +GLV D   +  +I+++ +  +  +AEE+Y+ M+   ++ DV ++G LIN FAE 
Sbjct: 566 KKMHESGLVHDCIPYCAVISSFAKLGQLEKAEEVYKQMVGFSVQPDVIVFGVLINAFAEV 625

Query: 36  GCMEKAAHY 10
           GC+++A  Y
Sbjct: 626 GCVKEALSY 634



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/132 (30%), Positives = 63/132 (47%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           +T+ FN MI   G      +   L + ME      D  TY  +I + A    ++++    
Sbjct: 333 TTVTFNTMIHICGNHGQLSEVDSLMQKMEEVRCPPDTRTYNILISLHARHDNIDMATNYF 392

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
            KM    L PD   +R L+ AY       +AEE+   M +RG+E+D   + AL  ++ EA
Sbjct: 393 AKMKEACLEPDPVSYRTLLYAYSVRHMVSKAEELVSEMDERGLEIDEFTHSALTRMYIEA 452

Query: 36  GCMEKAAHYFQR 1
           G +EK+  +F R
Sbjct: 453 GMLEKSWVWFMR 464


>ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333341|gb|EFH63759.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 989

 Score =  108 bits (270), Expect = 7e-22
 Identities = 57/129 (44%), Positives = 86/129 (66%)
 Frame = -2

Query: 390 LEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEK 211
           LE+NVMIKAYG AKLH KAL +F+ M+ QG   D  TY ++IQ+ A V L++ ++ IL +
Sbjct: 513 LEYNVMIKAYGKAKLHEKALSIFKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAE 572

Query: 210 MLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGC 31
           ML++G  P    +  LIA+Y R     +A ++Y+ M   G++ +  +YG+LIN FAE+G 
Sbjct: 573 MLDSGCKPGCKTYAALIASYVRLGLLSDAVDLYEAMKKTGVKPNEVVYGSLINGFAESGM 632

Query: 30  MEKAAHYFQ 4
           +E+A  YF+
Sbjct: 633 VEEAIQYFK 641


>gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis]
          Length = 1018

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/132 (43%), Positives = 83/132 (62%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + +E+NVM+KAYG AKL+ KAL LF+ M   G   D  TY ++IQ+ +   L++ +  +L
Sbjct: 546 NVMEYNVMVKAYGKAKLYDKALSLFKGMRNHGAWPDECTYNSLIQMFSKGDLVDRAVDLL 605

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
            +M   GL P+   F  LIA Y R  +  EA  +YQ ML  G++ +  +YGAL+N FAE+
Sbjct: 606 SEMQGMGLKPNCLTFSALIACYARLGQLSEAVGVYQKMLSTGVKPNEVVYGALVNGFAES 665

Query: 36  GCMEKAAHYFQR 1
           G +E+A  YFQR
Sbjct: 666 GKVEEALKYFQR 677


>ref|XP_006841750.1| hypothetical protein AMTR_s00003p00261700 [Amborella trichopoda]
           gi|548843771|gb|ERN03425.1| hypothetical protein
           AMTR_s00003p00261700 [Amborella trichopoda]
          Length = 995

 Score =  107 bits (266), Expect = 2e-21
 Identities = 56/129 (43%), Positives = 84/129 (65%)
 Frame = -2

Query: 387 EFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEKM 208
           E+NVMIKAYG AKL+ KAL LFE M++ G+  D  TY ++IQ+ ++  L + +R  L KM
Sbjct: 510 EYNVMIKAYGNAKLYDKALSLFEGMKSHGIWPDECTYNSLIQMLSSGDLSDSARETLGKM 569

Query: 207 LNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGCM 28
              G  P  + F  ++A++ R+ RA EA +IYQ ML  G+  +  ++GALIN +AEAG +
Sbjct: 570 QEEGFKPQLSTFSSVLASFARTGRAAEAVQIYQEMLRSGVSPNEIVFGALINAYAEAGQV 629

Query: 27  EKAAHYFQR 1
           ++A  Y  +
Sbjct: 630 KEALDYIHK 638


>ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g73710 gi|12324197|gb|AAG52063.1|AC012679_1
           hypothetical protein; 49134-52109 [Arabidopsis thaliana]
           gi|332197379|gb|AEE35500.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 991

 Score =  107 bits (266), Expect = 2e-21
 Identities = 56/129 (43%), Positives = 85/129 (65%)
 Frame = -2

Query: 390 LEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEK 211
           LE+NVMIKAYG AKLH KAL LF+ M+ QG   D  TY ++ Q+ A V L++ ++ IL +
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575

Query: 210 MLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGC 31
           ML++G  P    +  +IA+Y R     +A ++Y+ M   G++ +  +YG+LIN FAE+G 
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635

Query: 30  MEKAAHYFQ 4
           +E+A  YF+
Sbjct: 636 VEEAIQYFR 644


>ref|XP_006390515.1| hypothetical protein EUTSA_v10019624mg, partial [Eutrema
           salsugineum] gi|557086949|gb|ESQ27801.1| hypothetical
           protein EUTSA_v10019624mg, partial [Eutrema salsugineum]
          Length = 967

 Score =  105 bits (263), Expect = 5e-21
 Identities = 55/129 (42%), Positives = 83/129 (64%)
 Frame = -2

Query: 390 LEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEK 211
           LE+NVMIKAYG+AKLH KAL LF+ M+ QG   D  TY +++Q+ A   L++ +  IL +
Sbjct: 508 LEYNVMIKAYGMAKLHEKALSLFKRMKNQGTWPDECTYNSLVQMLAGADLVDEAHRILAE 567

Query: 210 MLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGC 31
           M+++   P    F  LIA+Y R     +A ++Y+ M   G++ +  +YG+LIN FAE G 
Sbjct: 568 MMDSDCKPGCKTFAALIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAENGM 627

Query: 30  MEKAAHYFQ 4
           +E+A  YF+
Sbjct: 628 VEEAIQYFR 636


>ref|XP_006838892.1| hypothetical protein AMTR_s00002p00268520 [Amborella trichopoda]
           gi|548841398|gb|ERN01461.1| hypothetical protein
           AMTR_s00002p00268520 [Amborella trichopoda]
          Length = 865

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/130 (40%), Positives = 83/130 (63%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           S LEFNVMIKAYG  K++ KA  L +LME +GV  D+ TY +++QI +   L + +   +
Sbjct: 519 SVLEFNVMIKAYGNGKMYDKACDLIDLMEDRGVFPDKCTYNSLVQILSCAELPDKAIYFV 578

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
            KM   G V D   +  +I+++ R  +   AE++Y+ M+  G++ DV ++G L+N FAE 
Sbjct: 579 RKMQKAGFVNDCVPYCAVISSFARVGKTENAEDMYKEMVGFGVQPDVIVFGTLVNAFAEL 638

Query: 36  GCMEKAAHYF 7
           GC+++A +YF
Sbjct: 639 GCVKEATYYF 648



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/118 (28%), Positives = 56/118 (47%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           S+  +N +I  YG A    +A   F  M  +G++    T+ T+I IC N   +E S  +L
Sbjct: 311 SSYTYNTLIDTYGKAGQLQEASNTFNQMLREGIIPTTVTFNTMIHICGNYGHLEESDALL 370

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFA 43
            KM      PD   + +LI+ + R+D    A   +  M   G++ D+  Y  L+  F+
Sbjct: 371 LKMEELRCSPDTRTYNILISLHARNDNINAAARYFLKMKAAGLKPDLVSYRTLVYAFS 428


>ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331380|gb|EFH61799.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 841

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/131 (41%), Positives = 85/131 (64%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + LE+NVMIKAYGI+K   KA +LFE M + GV  D+ TY T++QI A+  + + ++  L
Sbjct: 503 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYL 562

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           EKM  TG V D   +  +I+++ +  +   AEE+Y+ M++  IE DV +YG LIN FA+ 
Sbjct: 563 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 622

Query: 36  GCMEKAAHYFQ 4
           G +++A  Y +
Sbjct: 623 GNVQQAMSYVE 633



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/132 (29%), Positives = 63/132 (47%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           +T+ FN MI  YG     G+   L + M+      D  TY  +I +    + +E +    
Sbjct: 331 TTVTFNTMIHVYGNNGQFGEVTSLMKTMKFH-CAPDTRTYNILISLHTKNNDIERAGTYF 389

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           ++M   GL PD   +R L+ A+       EAEE+   M D  +E+D     AL  ++ EA
Sbjct: 390 KEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEA 449

Query: 36  GCMEKAAHYFQR 1
             +EK+  +F+R
Sbjct: 450 EMLEKSWSWFKR 461


>ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297308804|gb|EFH39266.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 842

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/131 (41%), Positives = 85/131 (64%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + LE+NVMIKAYGI+K   KA +LFE M + GV  D+ TY T++QI A+  + + ++  L
Sbjct: 504 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYL 563

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           EKM  TG V D   +  +I+++ +  +   AEE+Y+ M++  IE DV +YG LIN FA+ 
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623

Query: 36  GCMEKAAHYFQ 4
           G +++A  Y +
Sbjct: 624 GNVQQAMSYVE 634



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/132 (29%), Positives = 63/132 (47%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           +T+ FN MI  YG     G+   L + M+      D  TY  +I +    + +E +    
Sbjct: 332 TTVTFNTMIHVYGNNGQFGEVTSLMKTMKFH-CAPDTRTYNILISLHTKNNDIERAGTYF 390

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           ++M   GL PD   +R L+ A+       EAEE+   M D  +E+D     AL  ++ EA
Sbjct: 391 KEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEA 450

Query: 36  GCMEKAAHYFQR 1
             +EK+  +F+R
Sbjct: 451 EMLEKSWSWFRR 462


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/129 (39%), Positives = 85/129 (65%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + LEFNVMIKAYG  K + KA  LF+ ME+ GV+ D+ +Y +++QI A+  L + ++  L
Sbjct: 537 TVLEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYL 596

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           +KM   GLV D   +  +I+++ +  +   AEE+Y+ M+   ++ D+ +YG LIN FA++
Sbjct: 597 KKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADS 656

Query: 36  GCMEKAAHY 10
           GC+++A  Y
Sbjct: 657 GCVKEAISY 665



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/137 (29%), Positives = 65/137 (47%)
 Frame = -2

Query: 411 KRGM*STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMEL 232
           KR + +T+ FN MI   G      +   L + ME      D  TY  +I I A  + + +
Sbjct: 359 KRILPTTVTFNTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINM 418

Query: 231 SRGILEKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALIN 52
           +    ++M    L PD   +R L+ A+       +AE +   M ++GIE+D     AL  
Sbjct: 419 AASYFKRMKKDQLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTR 478

Query: 51  VFAEAGCMEKAAHYFQR 1
           ++ EAG +EK+  +F R
Sbjct: 479 MYIEAGMLEKSWLWFWR 495


>ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g23020 gi|9294191|dbj|BAB02093.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643185|gb|AEE76706.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 842

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/131 (41%), Positives = 83/131 (63%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + +E+NVMIKAYGI+K   KA +LFE M + GV  D+ TY T++QI A+  +    R  L
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           EKM  TG V D   +  +I+++ +  +   AEE+Y+ M++  IE DV +YG LIN FA+ 
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623

Query: 36  GCMEKAAHYFQ 4
           G +++A  Y +
Sbjct: 624 GNVQQAMSYVE 634



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/132 (28%), Positives = 63/132 (47%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           +T+ FN MI  YG     G+   L + M+      D  TY  +I +    + +E +    
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYF 390

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           ++M + GL PD   +R L+ A+       EAE +   M D  +E+D     AL  ++ EA
Sbjct: 391 KEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEA 450

Query: 36  GCMEKAAHYFQR 1
             +EK+  +F+R
Sbjct: 451 EMLEKSWSWFKR 462


>ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Populus trichocarpa]
           gi|550325820|gb|EEE95296.2| hypothetical protein
           POPTR_0013s14110g [Populus trichocarpa]
          Length = 965

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/140 (39%), Positives = 84/140 (60%)
 Frame = -2

Query: 423 IAPEKRGM*STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVS 244
           + PEK      LE+NVM+KAYG AKL+ KA  LF+ M   G   D  TY ++IQ+ +   
Sbjct: 491 LGPEK----GVLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGD 546

Query: 243 LMELSRGILEKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYG 64
           LM+ +R +L++M   G  P    F  ++A Y R  +  +A ++YQ M+  G++ +  +YG
Sbjct: 547 LMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYG 606

Query: 63  ALINVFAEAGCMEKAAHYFQ 4
           +LIN FAE G +E+A  YF+
Sbjct: 607 SLINGFAEVGNVEEALKYFR 626


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/129 (37%), Positives = 86/129 (66%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + LEFNVMIKAYG+ K + KA K+F+ M++ GV+ D+ +Y ++IQI     +  ++   L
Sbjct: 524 TVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYL 583

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           +KM + GLV D   + ++I+++ +      A+++Y+ M+  G++ D+ +YG LIN FA+A
Sbjct: 584 KKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADA 643

Query: 36  GCMEKAAHY 10
           G +++A +Y
Sbjct: 644 GSVKEAINY 652



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLL---DRFTYCTIIQICANVSLMELSR 226
           +T+ FN MI   G    HG+  ++  LM+    L    D  TY  +I + A    ++L+ 
Sbjct: 351 TTVTFNTMIHICGN---HGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLAS 407

Query: 225 GILEKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVF 46
               +M   GL PD   +R L+ AY       EAE++   M +RG+E+D     AL  ++
Sbjct: 408 NYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMY 467

Query: 45  AEAGCMEKAAHYFQR 1
            +AG +E++  +F R
Sbjct: 468 IDAGMLEESWSWFWR 482


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Cucumis sativus]
          Length = 858

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/129 (37%), Positives = 86/129 (66%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           + LEFNVMIKAYG+ K + KA K+F+ M++ GV+ D+ +Y ++IQI     +  ++   L
Sbjct: 523 TVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYL 582

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           +KM + GLV D   + ++I+++ +      A+++Y+ M+  G++ D+ +YG LIN FA+A
Sbjct: 583 KKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADA 642

Query: 36  GCMEKAAHY 10
           G +++A +Y
Sbjct: 643 GSVKEAINY 651



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLL---DRFTYCTIIQICANVSLMELSR 226
           +T+ FN MI   G    HG+  ++  LM+    L    D  TY  +I + A    ++L+ 
Sbjct: 350 TTVTFNTMIHICGN---HGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLAS 406

Query: 225 GILEKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVF 46
               +M   GL PD   +R L+ AY       EAE++   M +RG+E+D     AL  ++
Sbjct: 407 NYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMY 466

Query: 45  AEAGCMEKAAHYFQR 1
            +AG +E++  +F R
Sbjct: 467 IDAGMLEESWSWFWR 481


>ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Glycine max]
          Length = 821

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/129 (41%), Positives = 84/129 (65%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           S LEFNVMIKAYGI K + KA +LF+ ME  GV+ DR +Y ++I I A+     +++  L
Sbjct: 488 SVLEFNVMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSYTSLIHILASADQPHIAKPYL 547

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           +KM   GLV D   +  +I+++ +  +    E+IY+ M+  G++ DV ++G LINVF++A
Sbjct: 548 KKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREMIRHGVQPDVIVHGILINVFSDA 607

Query: 36  GCMEKAAHY 10
           G +++A  Y
Sbjct: 608 GRVKEAIGY 616


>ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Glycine max]
          Length = 813

 Score =  103 bits (258), Expect = 2e-20
 Identities = 54/129 (41%), Positives = 82/129 (63%)
 Frame = -2

Query: 396 STLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGIL 217
           S LEFNVMIKAYGI K + KA +LF+ ME  GV+ DR +Y ++IQI        +++  L
Sbjct: 480 SVLEFNVMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYL 539

Query: 216 EKMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEA 37
           +KM   GLV D   + ++I ++ +  +   AE+IY  M+  G++ DV +Y  LINVF++A
Sbjct: 540 KKMQEAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEMIRHGVQPDVIVYSILINVFSDA 599

Query: 36  GCMEKAAHY 10
           G +++A  Y
Sbjct: 600 GRVKEAISY 608



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/114 (28%), Positives = 56/114 (49%)
 Frame = -2

Query: 384 FNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEKML 205
           +N +I  YG A    +A + F  M  QGV     T+ T+I IC N   +E    ++ KM 
Sbjct: 276 YNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKME 335

Query: 204 NTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFA 43
                P+   + +LI+ Y + D  G A + +++M +  +E D+  Y  L+  ++
Sbjct: 336 ELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYRTLLYAYS 389


>ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Fragaria vesca subsp. vesca]
          Length = 1000

 Score =  103 bits (257), Expect = 2e-20
 Identities = 55/128 (42%), Positives = 80/128 (62%)
 Frame = -2

Query: 390 LEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEK 211
           +E+NVMIKAYG AKL+ KA  LF  M+  G   D  TY ++IQ+ +   L++ +R +L +
Sbjct: 531 VEYNVMIKAYGKAKLYDKAFSLFRGMKKHGTWPDECTYNSLIQMFSGGDLVDRARDLLTE 590

Query: 210 MLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGC 31
           M  TGL P +  F  LIA Y R  +  +A ++YQ M+  G + +  +YG+LIN FAE G 
Sbjct: 591 MQETGLKPQSLTFSALIACYARLGQLSDAVDVYQDMVKSGTKPNEFVYGSLINGFAETGR 650

Query: 30  MEKAAHYF 7
           +E+A  YF
Sbjct: 651 VEEALKYF 658


>ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Capsella rubella]
           gi|565486079|ref|XP_006300679.1| hypothetical protein
           CARUB_v10019718mg [Capsella rubella]
           gi|482569388|gb|EOA33576.1| hypothetical protein
           CARUB_v10019718mg [Capsella rubella]
           gi|482569389|gb|EOA33577.1| hypothetical protein
           CARUB_v10019718mg [Capsella rubella]
          Length = 986

 Score =  103 bits (256), Expect = 3e-20
 Identities = 56/129 (43%), Positives = 83/129 (64%)
 Frame = -2

Query: 390 LEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEK 211
           LE+NVMIKAYG AKLH KAL LF+ M+ QG   D  TY ++IQ+ + V L++ ++ IL +
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKAMKNQGTWPDECTYNSLIQMLSGVDLVDEAQMILAE 575

Query: 210 MLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGC 31
           ML++   P    +  LIA+Y R     +A ++Y+ M    ++ +  +YG+LIN FAE G 
Sbjct: 576 MLDSSCRPGCKSYAALIASYVRLGLLSDAVDLYEAMEKTEVKPNEVVYGSLINGFAERGM 635

Query: 30  MEKAAHYFQ 4
           +E+A  YFQ
Sbjct: 636 VEEAIQYFQ 644


>ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like isoform X1 [Solanum tuberosum]
           gi|565382385|ref|XP_006357523.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g73710-like isoform X2 [Solanum tuberosum]
          Length = 1012

 Score =  102 bits (253), Expect = 7e-20
 Identities = 53/127 (41%), Positives = 81/127 (63%)
 Frame = -2

Query: 387 EFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILEKM 208
           E+NVMIKAYGIAKL+ KA  LF+ M+ QG   D  TY ++IQ+ +   L++ ++ +L +M
Sbjct: 541 EYNVMIKAYGIAKLYDKAFSLFKGMKNQGTWPDECTYNSLIQMFSGGDLVDQAKELLAEM 600

Query: 207 LNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAGCM 28
                 P  + F  LIA+Y R +R  +A +++  M + G++ +  +YG LI+ FAEAG  
Sbjct: 601 QGLRFKPSCSTFSALIASYVRMNRLSDAVDVFDEMSEAGVKPNEVVYGTLIDGFAEAGKF 660

Query: 27  EKAAHYF 7
           E+A HYF
Sbjct: 661 EEAMHYF 667



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/124 (25%), Positives = 57/124 (45%)
 Frame = -2

Query: 393 TLEFNVMIKAYGIAKLHGKALKLFELMEAQGVLLDRFTYCTIIQICANVSLMELSRGILE 214
           T  +N +I  YG A     A  +F  M   GV LD  T+ T+I IC +   +E +  +L 
Sbjct: 329 TATYNTLIDLYGKAGRLKDAANVFNEMLKSGVALDAVTFNTMIFICGSHGYLEEAEALLN 388

Query: 213 KMLNTGLVPDNAVFRLLIAAYGRSDRAGEAEEIYQLMLDRGIELDVTIYGALINVFAEAG 34
           KM   G+ PD   + + ++ Y  + +   A + Y+ +   G+  D     A+I    +  
Sbjct: 389 KMEERGISPDTKTYNIFLSLYANAGKIDRALQWYRKIRRTGLFPDAVTCRAIIRTLCKQN 448

Query: 33  CMEK 22
            +++
Sbjct: 449 MVQE 452