BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027677
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi...   110   4e-22
gb|EFA79656.1| DNA-dependent protein kinase subunit [Polysphondy...    59   1e-06

>ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi|162683151|gb|EDQ69564.1|
            predicted protein [Physcomitrella patens]
          Length = 4165

 Score =  110 bits (274), Expect = 4e-22
 Identities = 62/185 (33%), Positives = 95/185 (51%)
 Frame = -2

Query: 597  MNLLLTTKKDRKLFSSIHDFLDWLFNQTCRPEENCRKTCMGLFSSICKLSPVGSPANWFK 418
            + LL   +KDR LF ++ DFL W+F QT       R  CM LF SIC   P  S A+WF+
Sbjct: 1207 ITLLEKKRKDRPLFLALDDFLQWVFEQTRLLHGRSRTKCMMLFCSICLSIPGCSSAHWFR 1266

Query: 417  NKFSSPKQITSAMKVFDIKLQYPEGPIEKNYVHLLNLWMAKFVCSIHWYGWALNEGLVTA 238
                S  Q++S +K FD+ + YP  P     +    LW+ KFV SIHW+ WAL E +++ 
Sbjct: 1267 ANICSGDQVSSTVKQFDVGMDYPHHP----SLQQEQLWLTKFVRSIHWFEWALKENIISI 1322

Query: 237  DDLLIKNDRESLKVSLAVETFLRNTSCQSMHIEISPSLTPAEKETFAFLRITAISTVLCF 58
             +LL       + ++ ++  FL++       I     LTP E++    LR  A + ++ F
Sbjct: 1323 KELLDFERDCVIHIASSISAFLQSLLKSQDSIHQFLDLTPGEQDELQKLRYEATTHLMKF 1382

Query: 57   LKDLI 43
               ++
Sbjct: 1383 CSQVL 1387


>gb|EFA79656.1| DNA-dependent protein kinase subunit [Polysphondylium pallidum PN500]
          Length = 4074

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
 Frame = -2

Query: 591  LLLTTKKDRKLFSSIHDFLDWLFNQTCRPEENCRKTCMGLFSSICKLSPVGSPAN-WFKN 415
            LL  T  +R+    + DF+ W+F +  R E   R T + LF  + +L P    AN W ++
Sbjct: 1157 LLNRTNNNRREHKDLADFVGWVFGEVGRMERRVRFTSIALFGRVVQLLPGQKRANIWIQH 1216

Query: 414  -----------KFSSPKQITSAMKVFDIKLQYPEGPIEKNYVHLLNLWMAKFVCSIHWYG 268
                       K + P Q  SAM         P      N+ H +  WM +   S+  Y 
Sbjct: 1217 QVKQHGLAALIKMAEPPQTASAM---------PPKLDGNNHRH-VEFWMRRLQASLAVYI 1266

Query: 267  WALNEGLVTADDLLIKNDRESLKVSLAVETFLRNTSCQSMHIEISPSLTPAEKETFAFLR 88
            W   EG    D + I  D  S  +S A   FL   +          SLTP E + F  L+
Sbjct: 1267 WYFGEGF--TDPVAISKDGSSRIISNAFYVFLSEYALVDQSHPAMASLTPREIDQFMTLK 1324

Query: 87   ITAISTVLCFLKDLI 43
               +  V      L+
Sbjct: 1325 CQTLEHVYALFSMLL 1339