BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027635
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             142   5e-32
dbj|BAD05711.1| putative RGH1A [Oryza sativa Japonica Group] gi|...    56   7e-06
gb|EEE68125.1| hypothetical protein OsJ_26203 [Oryza sativa Japo...    56   7e-06
gb|EEC82972.1| hypothetical protein OsI_27979 [Oryza sativa Indi...    56   7e-06

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  142 bits (359), Expect = 5e-32
 Identities = 82/197 (41%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3   QEECMDVLDEMFRLCAYLKNIKEMEPLREKMGDLFEKSMELVVEGTILCSSHNESSSFFR 182
           Q+EC  VL EM  L   +K IKE   L+++M D  + + EL+VEG+I C S   SS F  
Sbjct: 188 QDECFHVLKEMIFLAKVVKQIKERPQLQQRMHDEVKDATELIVEGSIKCCSQMASSQFSN 247

Query: 183 FLRADEQENRLRDIRRDIDKVHTHLMLQMSF--YTV-----QNLNRRGNRLPRQQFYPLH 341
           F      +  L ++ + +D  + H+ +QM    Y V      NL+RR         YP H
Sbjct: 248 FFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRR---------YPEH 298

Query: 342 AVGIEHAVEQVTNTLELDSEKNVLVVLLHGFGGTGKTTLADAVFASINNSNFTFSKVSLF 521
           AVG+E +  +V + LE  S++N + V+LHGFGG GKTTLADAVF+ ++     +S V LF
Sbjct: 299 AVGLEESSREVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAVFSMVDIKECQYSTVQLF 358

Query: 522 ENIDSVPSITQVQKDIL 572
           ENIDS P I ++QK IL
Sbjct: 359 ENIDSFPKIIELQKLIL 375


>dbj|BAD05711.1| putative RGH1A [Oryza sativa Japonica Group]
           gi|40253858|dbj|BAD05793.1| putative RGH1A [Oryza sativa
           Japonica Group]
          Length = 1041

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
 Frame = +3

Query: 24  LDEMFRLCAYLKNIKEMEPLREKMGDLFEKSMELVVEGTILCSSHNESSSFFRFLRADEQ 203
           LDE+ +L A  ++++E+    E + D F   ++         SS  +  S  R LR    
Sbjct: 58  LDELVKLWA--RDVRELSYDMEDIVDTFLVRID---------SSETDDRSVLRHLRKKMS 106

Query: 204 E--NRLRDIRR------DIDKVHTHLMLQMSFYTVQNLNRR-------GNRLPRQQFYPL 338
               R +D R+      +IDK    +  + + YTV ++  +         RL        
Sbjct: 107 RLFKRTKDRRKIAGAIKEIDKKLQEVEARRARYTVDSIITKPAGPASIDPRLQALYKRST 166

Query: 339 HAVGIEHAVEQVTNTLELDSEKNVLVVLLHGFGGTGKTTLADAVFASINNSNFTFSKVSL 518
             VGI+  V++V   L L  ++N+ +V + GFGG GKTTLA AV+  +           +
Sbjct: 167 ELVGIDGPVDKVIKMLSLGDDRNMKIVSVVGFGGLGKTTLAKAVYDKLKPD----FDCGV 222

Query: 519 FENIDSVPSITQVQKDIL 572
           F  +  VP I +V +DIL
Sbjct: 223 FVPVGRVPDIQKVLRDIL 240


>gb|EEE68125.1| hypothetical protein OsJ_26203 [Oryza sativa Japonica Group]
          Length = 1034

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
 Frame = +3

Query: 24  LDEMFRLCAYLKNIKEMEPLREKMGDLFEKSMELVVEGTILCSSHNESSSFFRFLRADEQ 203
           LDE+ +L A  ++++E+    E + D F   ++         SS  +  S  R LR    
Sbjct: 51  LDELVKLWA--RDVRELSYDMEDIVDTFLVRID---------SSETDDRSVLRHLRKKMS 99

Query: 204 E--NRLRDIRR------DIDKVHTHLMLQMSFYTVQNLNRR-------GNRLPRQQFYPL 338
               R +D R+      +IDK    +  + + YTV ++  +         RL        
Sbjct: 100 RLFKRTKDRRKIAGAIKEIDKKLQEVEARRARYTVDSIITKPAGPASIDPRLQALYKRST 159

Query: 339 HAVGIEHAVEQVTNTLELDSEKNVLVVLLHGFGGTGKTTLADAVFASINNSNFTFSKVSL 518
             VGI+  V++V   L L  ++N+ +V + GFGG GKTTLA AV+  +           +
Sbjct: 160 ELVGIDGPVDKVIKMLSLGDDRNMKIVSVVGFGGLGKTTLAKAVYDKLKPD----FDCGV 215

Query: 519 FENIDSVPSITQVQKDIL 572
           F  +  VP I +V +DIL
Sbjct: 216 FVPVGRVPDIQKVLRDIL 233


>gb|EEC82972.1| hypothetical protein OsI_27979 [Oryza sativa Indica Group]
          Length = 564

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
 Frame = +3

Query: 24  LDEMFRLCAYLKNIKEMEPLREKMGDLFEKSMELVVEGTILCSSHNESSSFFRFLRADEQ 203
           LDE+ +L A  ++++E+    E + D F   ++         SS  +  S  R LR    
Sbjct: 51  LDELVKLWA--RDVRELSYDMEDIVDTFLVRID---------SSETDDRSVLRHLRKKMS 99

Query: 204 E--NRLRDIRR------DIDKVHTHLMLQMSFYTVQNLNRR-------GNRLPRQQFYPL 338
               R +D R+      +IDK    +  + + YTV ++  +         RL        
Sbjct: 100 RLFKRTKDRRKIAGAIKEIDKKLQEVEARRARYTVDSIITKPAGPASIDPRLQALYKRST 159

Query: 339 HAVGIEHAVEQVTNTLELDSEKNVLVVLLHGFGGTGKTTLADAVFASINNSNFTFSKVSL 518
             VGI+  V++V   L L  ++N+ +V + GFGG GKTTLA AV+  +           +
Sbjct: 160 ELVGIDGPVDKVIKMLSLGDDRNMKIVSVVGFGGLGKTTLAKAVYDKLKPD----FDCGV 215

Query: 519 FENIDSVPSITQVQKDIL 572
           F  +  VP I +V +DIL
Sbjct: 216 FVPVGRVPDIQKVLRDIL 233