BLASTX nr result

ID: Ephedra28_contig00027631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027631
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367448.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    59   9e-07
ref|XP_006854041.1| hypothetical protein AMTR_s00048p00066880 [A...    58   1e-06
ref|XP_004244398.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    56   6e-06

>ref|XP_006367448.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Solanum
           tuberosum]
          Length = 716

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361 IPQKSNICENSKSITTNPDAGSENSRLIDDS-SPKLCSSDDPGNDNANVMDEEEVDDKDI 185
           +P+ S I  N +  + + ++  E   ++      +  S D  G + A V   E+V+   +
Sbjct: 132 VPRNSRINGNFEKKSEDEESSREVVDVLSSCVMEEKLSCDKEGKNGAGV---EKVEGSGV 188

Query: 184 GHLIRKLQSITVSDKETELSASQFEINDQEQEDEVFALQAIYGEDVHLFENHDSGLRTLK 5
             + R+L+ + +  +E ELS  Q  INDQ QEDE+ AL++I+G++V + +   +GLR+ +
Sbjct: 189 DDVWRRLEELQLGAEEPELSTEQLRINDQAQEDELLALESIFGDNVFVLDRR-NGLRSFQ 247

Query: 4   I 2
           I
Sbjct: 248 I 248


>ref|XP_006854041.1| hypothetical protein AMTR_s00048p00066880 [Amborella trichopoda]
           gi|548857710|gb|ERN15508.1| hypothetical protein
           AMTR_s00048p00066880 [Amborella trichopoda]
          Length = 653

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 37/50 (74%)
 Frame = -1

Query: 178 LIRKLQSITVSDKETELSASQFEINDQEQEDEVFALQAIYGEDVHLFENH 29
           ++ +L+ +++  +E +LS  Q  INDQEQEDE+ AL+AIYGEDV   ++H
Sbjct: 155 IVNRLKELSIGFEEPQLSEDQLRINDQEQEDELLALEAIYGEDVSFIDSH 204


>ref|XP_004244398.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like isoform 1
           [Solanum lycopersicum]
          Length = 678

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
 Frame = -1

Query: 334 NSKSITTNPDA----GSENSRLIDDSSPKLCSSDDPGNDNANVMDEEEVDDKDIGHLIRK 167
           NSK ++ N  A    G+   +  D+ S +    D    D       E+V+   I  + ++
Sbjct: 98  NSKRVSRNSRAYGVNGNFEKKSEDEESSREAVEDKLSGDKEE-KGVEKVEGSSIDDVWKR 156

Query: 166 LQSITVSDKETELSASQFEINDQEQEDEVFALQAIYGEDVHLFENHDSGLRTLKI 2
           L  +    +E ELS  Q  INDQ QEDE+ AL++I+G+ V + +   +GLR+ +I
Sbjct: 157 LDELQFGAEEPELSTEQLRINDQAQEDELLALESIFGDSVFVLDRR-NGLRSFQI 210


Top