BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027529
         (370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621264.1| Pentatricopeptide repeat-containing protein ...   111   1e-22
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr...   108   1e-21
gb|ABR16520.1| unknown [Picea sitchensis]                             107   1e-21
gb|EMJ06250.1| hypothetical protein PRUPE_ppa004275mg [Prunus pe...   106   4e-21
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Caps...   104   1e-20
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ...   104   1e-20
emb|CBI33142.3| unnamed protein product [Vitis vinifera]              104   1e-20
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]   104   1e-20
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar...   104   1e-20
ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ...   103   2e-20
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar...   103   2e-20
gb|EOY24222.1| Tetratricopeptide repeat (TPR)-like superfamily p...   103   3e-20
ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_004509094.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20

>ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496279|gb|AES77482.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 519

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/123 (43%), Positives = 78/123 (63%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  W+ +I+GYAR G++K A  LFN+MP R   SW  M++ Y + G++E AR LFD +P
Sbjct: 173 DVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAP 232

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGM 361
             ++VV+WNAMI GY       +AL +F  M R GV P+  T +++L+ C    DLE G 
Sbjct: 233 V-KDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGK 291

Query: 362 QIH 370
           ++H
Sbjct: 292 KVH 294


>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
           gi|557111828|gb|ESQ52112.1| hypothetical protein
           EUTSA_v10016379mg [Eutrema salsugineum]
          Length = 626

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+GYA +  I+ A+ LF  MP R+ ASW +M++ + R+G+I  A  LFD  P  +N
Sbjct: 235 WNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRACGLFDRMP-QKN 293

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           V++W  MITGY QN    +AL +F  M+R G V+PN  TY+++L+ C   + L +G QIH
Sbjct: 294 VISWTTMITGYVQNKENEDALKVFSNMLRDGCVKPNEGTYVSILSACSDMAGLVEGQQIH 353



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/84 (45%), Positives = 53/84 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN +I   A+ G I+ A  LF +MP+R   SWT+M+    ++GK++EARR+FD  P   N
Sbjct: 173 WNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARRVFDCMP-ERN 231

Query: 194 VVTWNAMITGYGQNWCKPEALMMF 265
            ++WNAMITGY  N    EA  +F
Sbjct: 232 TISWNAMITGYAHNNRIEEADQLF 255



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/91 (41%), Positives = 53/91 (58%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           +V  W  M+SGY R     AAE LF +MP R++ SW +M+  YA+ G+I++A  LFD  P
Sbjct: 107 NVVTWTAMVSGYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGYAQSGRIDKALELFDEMP 166

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
              N V+WN +I    Q     EA+ +F RM
Sbjct: 167 -ERNTVSWNTLIKALAQLGRIQEAMNLFERM 196



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/87 (42%), Positives = 54/87 (62%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI GYA+ G I  A  LF++MP R+  SW +++ A A+ G+I+EA  LF+  P  + 
Sbjct: 142 WNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRD- 200

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRM 274
           V++W AM+ G G+N    EA  +F  M
Sbjct: 201 VISWTAMVDGLGKNGKVDEARRVFDCM 227



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/84 (35%), Positives = 50/84 (59%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVVT 202
           +I    ++G I  A  +F+++P R + +WT +++ Y + G + EAR LFD +   +NVVT
Sbjct: 51  LIKKLCKEGRIAEARKVFDRLPQRDEYTWTDVITGYIKLGNMREARELFDRADARKNVVT 110

Query: 203 WNAMITGYGQNWCKPEALMMFGRM 274
           W AM++GY +      A M+F  M
Sbjct: 111 WTAMVSGYLRAKQFSAAEMLFQEM 134



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQA-SWTSMMSAYARHGKIEEARRLFDMSPCHE 190
           W  +I+GY + GN++ A  LF++  +R    +WT+M+S Y R  +   A  LF   P   
Sbjct: 79  WTDVITGYIKLGNMREARELFDRADARKNVVTWTAMVSGYLRAKQFSAAEMLFQEMP-ER 137

Query: 191 NVVTWNAMITGYGQNWCKPEALMMFGRM 274
           N V+WN MI GY Q+    +AL +F  M
Sbjct: 138 NEVSWNTMIDGYAQSGRIDKALELFDEM 165



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/92 (27%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = +2

Query: 92  RSQASWTSMMSAYARHGKIEEARRLFDMSPCHE-NVVTWNAMITGYGQNWCKPEALMMFG 268
           R++   +++++ Y++ G++  AR++FD     + ++++WN+MI  Y  +    EA+ M+ 
Sbjct: 363 RNELVTSAIINMYSKCGELIAARKIFDAGLVSQRDLISWNSMIAVYAHHGRGKEAIEMYD 422

Query: 269 RMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQ 364
           +M ++G +P   TY+ +L+ C     +E+GM+
Sbjct: 423 QMRKHGFKPGEVTYLNLLSACSHAGLVEKGME 454


>gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/119 (44%), Positives = 76/119 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+GY ++G++K A  LF  MP R+  SW +++S +A++G++EEA +LF   P   N
Sbjct: 294 WNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP-ECN 352

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           VV+WNAMI GY QN     AL +FG+M    ++PN  T+  VL  C   + LEQG + H
Sbjct: 353 VVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAH 411



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/88 (44%), Positives = 55/88 (62%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  WN MI+GY ++G I+ A  LF ++P R   +W +MM+ YA+ G +E A  LF+  P
Sbjct: 228 DVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMP 287

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMF 265
             +N+V+WN MI GY QN    EA  +F
Sbjct: 288 -EQNLVSWNTMIAGYVQNGSVKEAFKLF 314



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/91 (37%), Positives = 55/91 (60%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           +V + N ++  YA+ G I+ A  LF++MP R   SW +M++ Y ++G IE+A +LF   P
Sbjct: 197 NVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP 256

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
              +V+TWN M+ GY Q      A+ +F +M
Sbjct: 257 -KRDVITWNTMMAGYAQCGDVENAVELFEKM 286



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 39/156 (25%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWT--------------------------- 112
           WN MI+GY+++G  + A  LF QM        T                           
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVI 415

Query: 113 ------------SMMSAYARHGKIEEARRLFDMSPCHENVVTWNAMITGYGQNWCKPEAL 256
                       +++  YA+ G IE+AR++FD     ++  + +AMI GY  N C  E+L
Sbjct: 416 RSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMR-QQDSASLSAMIVGYAINGCSKESL 474

Query: 257 MMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQ 364
            +F +M   G++P+  T++ VL+ C     +++G Q
Sbjct: 475 ELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQ 510



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/109 (33%), Positives = 56/109 (51%)
 Frame = +2

Query: 44  DGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVVTWNAMITG 223
           D  +  A  +  Q   +  +    ++S Y + G + EARR+FD  P  +NVV+W AMI  
Sbjct: 82  DAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPV-KNVVSWTAMIAA 140

Query: 224 YGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           Y ++    EAL  F  M   G++PN  T+ ++L  C   +DLE   + H
Sbjct: 141 YARHEHGQEALGFFYEMQDVGIQPNHFTFASILPAC---TDLEVLGEFH 186


>gb|EMJ06250.1| hypothetical protein PRUPE_ppa004275mg [Prunus persica]
          Length = 519

 Score =  106 bits (264), Expect = 4e-21
 Identities = 50/119 (42%), Positives = 75/119 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           W  +ISGY  +G    A  L+ QMP ++  + T+M++ Y++ GK+ EAR LFD   C ++
Sbjct: 133 WTVLISGYVENGKFDEARELYEQMPEKNVVAMTAMVTGYSKEGKMGEARTLFDQIQCKDH 192

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           V +WNAMITGY QN    EAL +  + ++ G+RP+ CT ++VL  C   + LE+G Q H
Sbjct: 193 V-SWNAMITGYTQNGSGEEALKLHSQKLKIGLRPDKCTLVSVLTACSTLALLEEGRQAH 250



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/91 (40%), Positives = 56/91 (61%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           ++  WN MISGY +   ++ A  LF  MP R+  S+T+M+  YA+ G +E AR LFD  P
Sbjct: 67  NIASWNAMISGYVKYDRLEEASRLFEDMPRRNVISYTAMIDGYAKKGDLERARALFDCMP 126

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
            H+N V+W  +I+GY +N    EA  ++ +M
Sbjct: 127 -HKNAVSWTVLISGYVENGKFDEARELYEQM 156



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/118 (32%), Positives = 64/118 (54%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  WN +++GY ++G    ++ LF  MP+R+  SW SM++    +  ++EA R F   P
Sbjct: 5   DVVTWNAIVTGYRKNGYFGESKRLFGLMPARNVVSWNSMIAGCFENEMVDEAFRYFRSMP 64

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQ 355
              N+ +WNAMI+GY     K + L    R+     R N+ +Y  +++    + DLE+
Sbjct: 65  -ERNIASWNAMISGY----VKYDRLEEASRLFEDMPRRNVISYTAMIDGYAKKGDLER 117



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/87 (37%), Positives = 49/87 (56%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+G   +  +  A   F  MP R+ ASW +M+S Y ++ ++EEA RLF+  P   N
Sbjct: 40  WNSMIAGCFENEMVDEAFRYFRSMPERNIASWNAMISGYVKYDRLEEASRLFEDMP-RRN 98

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRM 274
           V+++ AMI GY +      A  +F  M
Sbjct: 99  VISYTAMIDGYAKKGDLERARALFDCM 125


>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Fragaria vesca subsp. vesca]
          Length = 540

 Score =  105 bits (263), Expect = 5e-21
 Identities = 51/123 (41%), Positives = 76/123 (61%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  W+ + +GYAR G + AA  LF++MP +   SW  M++ Y + G++E AR+LFD  P
Sbjct: 178 DVVAWSALTAGYARRGKLDAARRLFDEMPVKDLVSWNVMITGYTKQGEMESARKLFDEVP 237

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGM 361
              +VVTWNAMI GY +  C  +AL MF  M   G +P+  T +++L+ C    +LE G 
Sbjct: 238 -RRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDEVTMLSLLSACADVGELEIGK 296

Query: 362 QIH 370
           ++H
Sbjct: 297 RLH 299


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/119 (44%), Positives = 76/119 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           W+ + +GYAR G +  A  LF++MP +   SW  M++AYA+HG++E+AR+LFD  P  ++
Sbjct: 182 WSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVP-KKD 240

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           VVTWNAMI GY  +    EAL MF  M   G RP+  T +++L+      DLE G +IH
Sbjct: 241 VVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIH 299


>ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Capsella rubella]
           gi|482564867|gb|EOA29057.1| hypothetical protein
           CARUB_v10025312mg [Capsella rubella]
          Length = 636

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/120 (43%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+GYA +  I  A+ LF  MP R  ASW +M++ + R+  I  A  LFD  P  +N
Sbjct: 245 WNAMITGYAHNNRIDEADQLFQVMPERDFASWNTMITGFIRNKNINRASVLFDRMP-EKN 303

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           V++W  MITGY +N    +AL  F +M+R G V+PN+ TY+++L+ C   + L +G QIH
Sbjct: 304 VISWTTMITGYVENKENEDALKFFSKMLRDGYVKPNVGTYVSILSACSDSAGLVEGQQIH 363



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/84 (44%), Positives = 52/84 (61%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN M+    + G I  A  LF +MP R   SWT+M+   A++GK+++AR+LFD  P   N
Sbjct: 183 WNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVDGLAKNGKVDDARQLFDSMP-ERN 241

Query: 194 VVTWNAMITGYGQNWCKPEALMMF 265
           +++WNAMITGY  N    EA  +F
Sbjct: 242 IISWNAMITGYAHNNRIDEADQLF 265



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/96 (40%), Positives = 55/96 (57%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           +V  W  M+SGY R   +  AE LF  MP R+  SW +M+  YA+ G+I++A  LFD  P
Sbjct: 117 NVVTWTAMVSGYLRSKQLSVAEMLFQDMPERNIVSWNTMVDGYAQSGRIDKALELFDEMP 176

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
             +N+V+WN M+    Q     EA+ +F RM R  V
Sbjct: 177 -EKNIVSWNTMMKALVQRGRIDEAMNLFQRMPRRDV 211



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQ-ASWTSMMSAYARHGKIEEARRLFDMS 178
           DV  W  +I+GY + GN++ A  LF+++ SR    +WT+M+S Y R  ++  A  LF   
Sbjct: 85  DVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAEMLFQDM 144

Query: 179 PCHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQG 358
           P   N+V+WN M+ GY Q+    +AL +F  M       N+ ++ T++     +  +++ 
Sbjct: 145 P-ERNIVSWNTMVDGYAQSGRIDKALELFDEM----PEKNIVSWNTMMKALVQRGRIDEA 199

Query: 359 MQI 367
           M +
Sbjct: 200 MNL 202



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVVT 202
           +I    R+G I  A  LF+ +P R   +WT +++ Y + G + EAR LFD     +NVVT
Sbjct: 61  LIGELCREGRIVEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVT 120

Query: 203 WNAMITGYGQNWCKPEALMMFGRM 274
           W AM++GY ++     A M+F  M
Sbjct: 121 WTAMVSGYLRSKQLSVAEMLFQDM 144



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/86 (29%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = +2

Query: 110 TSMMSAYARHGKIEEARRLFDMS-PCHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYG 286
           +++++ Y++ G++  AR++FD    C  ++++WN+MI  Y  +    EA+ M+ +M+++G
Sbjct: 379 SALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMLKHG 438

Query: 287 VRPNLCTYMTVLNICGFQSDLEQGMQ 364
            +P+  TY+ +L  C     +E+GM+
Sbjct: 439 FKPSEVTYLNLLFACSHAGLVEKGME 464


>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 590

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/119 (40%), Positives = 75/119 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           W  MISGY  +G    AE LF QMP ++  + T+M++ Y + GK ++A+ LFD  PC + 
Sbjct: 205 WTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD- 263

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           + +WNAMITGY QN    EAL +  +M++ G++P+  T ++VL  C   + L++G + H
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTH 322



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MISG  R   ++ A  LF +MP R+  S+T+M+  YA+ G+IE+AR LF+  P  +N
Sbjct: 143 WNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMP-QKN 201

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRM 274
           VV+W  MI+GY +N    EA  +F +M
Sbjct: 202 VVSWTVMISGYVENGKFDEAENLFEQM 228



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/91 (41%), Positives = 55/91 (60%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  +N  I   AR GNI AA  LF++MP R   SW S+++ Y ++G  +E++RLF + P
Sbjct: 46  DVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMP 105

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
             +NVV+WN+MI G  ++    EA   F  M
Sbjct: 106 T-KNVVSWNSMIAGCIEDERIDEAWQYFQAM 135



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+G   D  I  A   F  MP R+ ASW +M+S   R+ ++EEA RLF+  P   N
Sbjct: 112 WNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMP-RRN 170

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
           V+++ AM+ GY +     +A  +F  M +  V
Sbjct: 171 VISYTAMVDGYAKIGEIEQARALFNCMPQKNV 202



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 51/96 (53%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           D   WN +I+GY ++G    ++ LF  MP+++  SW SM++      +I+EA + F   P
Sbjct: 77  DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 136

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
              N  +WNAMI+G  +     EA  +F  M R  V
Sbjct: 137 -QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNV 171


>ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Glycine max]
          Length = 518

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/123 (40%), Positives = 77/123 (62%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  W+ +I+GYA+ G++  A  LF++MP R   SW  M++ Y +HG++E ARRLFD +P
Sbjct: 172 DVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAP 231

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGM 361
             +++V+WNA+I GY       EAL +F  M   G  P+  T +++L+ C    DLE G 
Sbjct: 232 M-KDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGE 290

Query: 362 QIH 370
           ++H
Sbjct: 291 KVH 293


>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327209|gb|EFH57629.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/120 (44%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+GY  +  I  A+ LF  MP R  ASW +M++ + R+ +I  A  LFD  P  +N
Sbjct: 236 WNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMP-QKN 294

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           V++W AMITGY +N    EAL +F +M+R G V+PN+ TY+++L+ C   + L +G QIH
Sbjct: 295 VISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIH 354



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI    + G I  A  LF +MP +   SWT+M+   A++GK++EARRLFD  P   N
Sbjct: 174 WNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMP-ERN 232

Query: 194 VVTWNAMITGYGQNWCKPEALMMF 265
           +++WNAMITGY  N    EA  +F
Sbjct: 233 IISWNAMITGYTYNNRIDEADQLF 256



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/91 (41%), Positives = 52/91 (57%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           +V  W  M+SGY R   +  AE LF +MP R+  SW +M+  YA+ G+I++A  LFD  P
Sbjct: 108 NVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMP 167

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
              N V+WN MI    Q     EA+ +F RM
Sbjct: 168 -ERNTVSWNTMIKALVQRGRIDEAMNLFERM 197



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 36/87 (41%), Positives = 53/87 (60%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI GYA+ G I  A  LF++MP R+  SW +M+ A  + G+I+EA  LF+  P  ++
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPI-KD 201

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRM 274
           V++W AM+ G  +N    EA  +F  M
Sbjct: 202 VISWTAMVDGLAKNGKVDEARRLFDCM 228



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQ-ASWTSMMSAYARHGKIEEARRLFDMS 178
           DV  W  +I+GY + GN++ A  LF+++ SR    +WT+M+S Y R  ++  A  LF   
Sbjct: 76  DVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEM 135

Query: 179 PCHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
           P   N+V+WN MI GY Q+    +AL +F  M
Sbjct: 136 P-ERNIVSWNTMIDGYAQSGRIDKALELFDEM 166



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVVT 202
           +I    + G +  A  LF+ +P R   +WT +++ Y + G + EAR LFD     +NVVT
Sbjct: 52  LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVT 111

Query: 203 WNAMITGY 226
           W AM++GY
Sbjct: 112 WTAMVSGY 119



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/86 (29%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +2

Query: 110 TSMMSAYARHGKIEEARRLFDMS-PCHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYG 286
           +++++ Y++ G++  AR++FD    C  ++++WN+MI  Y  +    EA+ M+ +M ++G
Sbjct: 370 SALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHG 429

Query: 287 VRPNLCTYMTVLNICGFQSDLEQGMQ 364
            +P+  TY+ +L  C     +E+GM+
Sbjct: 430 FKPSEVTYLNLLFACSHAGLVEKGME 455


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/119 (40%), Positives = 75/119 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           W  MISGY  +G    AE LF QMP ++  + T+M++ Y + GK ++A+ LFD  PC + 
Sbjct: 133 WTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD- 191

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           + +WNAMITGY QN    EAL +  +M++ G++P+  T ++VL  C   + L++G + H
Sbjct: 192 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTH 250



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MISG  R   ++ A  LF +MP R+  S+T+M+  YA+ G+IE+AR LF+  P  +N
Sbjct: 71  WNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMP-QKN 129

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRM 274
           VV+W  MI+GY +N    EA  +F +M
Sbjct: 130 VVSWTVMISGYVENGKFDEAENLFEQM 156



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+G   D  I  A   F  MP R+ ASW +M+S   R+ ++EEA RLF+  P   N
Sbjct: 40  WNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMP-RRN 98

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
           V+++ AM+ GY +     +A  +F  M +  V
Sbjct: 99  VISYTAMVDGYAKIGEIEQARALFNCMPQKNV 130



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 51/96 (53%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           D   WN +I+GY ++G    ++ LF  MP+++  SW SM++      +I+EA + F   P
Sbjct: 5   DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 64

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
              N  +WNAMI+G  +     EA  +F  M R  V
Sbjct: 65  -QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNV 99


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/119 (40%), Positives = 75/119 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           W  MISGY  +G    AE LF QMP ++  + T+M++ Y + GK ++A+ LFD  PC + 
Sbjct: 205 WTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD- 263

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           + +WNAMITGY QN    EAL +  +M++ G++P+  T ++VL  C   + L++G + H
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTH 322



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MISG  R   ++ A  LF +MP R+  S+T+M+  YA+ G+IE+AR LF+  P  +N
Sbjct: 143 WNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMP-QKN 201

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRM 274
           VV+W  MI+GY +N    EA  +F +M
Sbjct: 202 VVSWTVMISGYVENGKFDEAENLFEQM 228



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/91 (40%), Positives = 55/91 (60%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  +N  I   AR GNI AA  +F++MP R   SW S+++ Y ++G  +E++RLF + P
Sbjct: 46  DVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMP 105

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRM 274
             +NVV+WN+MI G  ++    EA   F  M
Sbjct: 106 T-KNVVSWNSMIAGCIEDERIDEAWQYFQAM 135



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+G   D  I  A   F  MP R+ ASW +M+S   R+ ++EEA RLF+  P   N
Sbjct: 112 WNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMP-RRN 170

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
           V+++ AM+ GY +     +A  +F  M +  V
Sbjct: 171 VISYTAMVDGYAKIGEIEQARALFNCMPQKNV 202



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 51/96 (53%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           D   WN +I+GY ++G    ++ LF  MP+++  SW SM++      +I+EA + F   P
Sbjct: 77  DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 136

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
              N  +WNAMI+G  +     EA  +F  M R  V
Sbjct: 137 -QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNV 171


>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099187|sp|O64766.1|PP185_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g35030, mitochondrial; Flags: Precursor
           gi|3033399|gb|AAC12843.1| hypothetical protein
           [Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
           At2g35030 [Arabidopsis thaliana]
           gi|330253957|gb|AEC09051.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MI+GYA++  I  A+ LF  MP R  ASW +M++ + R+ ++ +A  LFD  P  +N
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP-EKN 294

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           V++W  MITGY +N    EAL +F +M+R G V+PN+ TY+++L+ C   + L +G QIH
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/84 (47%), Positives = 53/84 (63%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN M+    + G I  A  LF +MP R   SWT+M+   A++GK++EARRLFD  P   N
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP-ERN 232

Query: 194 VVTWNAMITGYGQNWCKPEALMMF 265
           +++WNAMITGY QN    EA  +F
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLF 256



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 39/96 (40%), Positives = 56/96 (58%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           +V  W  M+SGY R   +  AE LF +MP R+  SW +M+  YA+ G+I++A  LFD  P
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
              N+V+WN+M+    Q     EA+ +F RM R  V
Sbjct: 168 -ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 202



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/84 (36%), Positives = 47/84 (55%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVVT 202
           +I    + G I  A  LF+ +P R   +WT +++ Y + G + EAR LFD     +NVVT
Sbjct: 52  LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111

Query: 203 WNAMITGYGQNWCKPEALMMFGRM 274
           W AM++GY ++     A M+F  M
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEM 135



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/86 (29%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +2

Query: 110 TSMMSAYARHGKIEEARRLFDMS-PCHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYG 286
           +++++ Y++ G++  AR++FD    C  ++++WN+MI  Y  +    EA+ M+ +M ++G
Sbjct: 370 SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429

Query: 287 VRPNLCTYMTVLNICGFQSDLEQGMQ 364
            +P+  TY+ +L  C     +E+GM+
Sbjct: 430 FKPSAVTYLNLLFACSHAGLVEKGME 455


>ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 608

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MISGY + G+++ A A+F++MP +S  SWT+M+S YA  G ++ AR++FD  P  +N
Sbjct: 231 WNTMISGYVKLGDVETARAIFDEMPEKSIISWTAMVSGYATSGDVQSARKMFDRIP-EKN 289

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQGMQI 367
           VV+WNAMI GY  N    EAL +F  M+  G  +PN  T ++VL+ C      E G  I
Sbjct: 290 VVSWNAMIAGYVNNHMFDEALSVFQHMLIDGNCKPNQTTLISVLSACSHLGSHEHGKWI 348


>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
           thaliana gb|AC004044.1 and contains two domains PF|01535
           of unknown function [Arabidopsis thaliana]
          Length = 455

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 73/111 (65%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MISGY + GN + A  LF+ MP     SWT M++ +A+   +E AR+ FD  P  ++
Sbjct: 85  WNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMP-EKS 143

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSD 346
           VV+WNAM++GY QN    +AL +F  M+R GVRPN  T++ V++ C F++D
Sbjct: 144 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 194



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPS-RSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVV 199
           ++  +A+  +I++A  +FN++ + R+  +W +M+S Y R G +  AR+LFD  P   NVV
Sbjct: 220 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP-KRNVV 278

Query: 200 TWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQG 358
           +WN++I GY  N     A+  F  M+ YG  +P+  T ++VL+ CG  +DLE G
Sbjct: 279 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 332


>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 73/111 (65%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           WN MISGY + GN + A  LF+ MP     SWT M++ +A+   +E AR+ FD  P  ++
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMP-EKS 228

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSD 346
           VV+WNAM++GY QN    +AL +F  M+R GVRPN  T++ V++ C F++D
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPS-RSQASWTSMMSAYARHGKIEEARRLFDMSPCHENVV 199
           ++  +A+  +I++A  +FN++ + R+  +W +M+S Y R G +  AR+LFD  P   NVV
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP-KRNVV 363

Query: 200 TWNAMITGYGQNWCKPEALMMFGRMMRYG-VRPNLCTYMTVLNICGFQSDLEQG 358
           +WN++I GY  N     A+  F  M+ YG  +P+  T ++VL+ CG  +DLE G
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417


>gb|EOY24222.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 685

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/119 (43%), Positives = 74/119 (62%)
 Frame = +2

Query: 14  WNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSPCHEN 193
           W+ MISGY   G ++ A   F  +  +S  +WT+M+S Y + GKIE+A RLF   P  +N
Sbjct: 219 WSAMISGYVECGELELAVEFFELVDVKSVVAWTAMISGYMKFGKIEKAERLFKEMPV-KN 277

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           +VTWNAMI+GY +N    + L +F  M+RYG+RPN  +  +VL  C   S L+ G Q+H
Sbjct: 278 LVTWNAMISGYVENCRAEDGLKLFRMMLRYGIRPNNSSLSSVLLGCSELSALQFGKQVH 336



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/75 (40%), Positives = 49/75 (65%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           D   +N M++ Y  + +++ A + FN MP +  ASW +M+S +A+ G + +AR LF  +P
Sbjct: 153 DTVSYNIMLACYVHNSDMETAWSFFNSMPFKDSASWNTMISGFAQKGLMGKARELFSATP 212

Query: 182 CHENVVTWNAMITGY 226
             +N VTW+AMI+GY
Sbjct: 213 -EKNSVTWSAMISGY 226



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 110 TSMMSAYARHGKIEEARRLFDMSPCHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGV 289
           TS++S Y + G +++A +LF +    ++VV+WNAMI+GY Q+    +AL +F  M   GV
Sbjct: 352 TSLISMYCKCGALDDAWKLF-LEIKKKDVVSWNAMISGYAQHGAGEKALHLFEEMRDEGV 410

Query: 290 RPNLCTYMTVLNICGFQSDLEQGMQ 364
           RP+  T++ VL  C     ++ G++
Sbjct: 411 RPDWITFVAVLLACNHAGLVDMGIR 435


>ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cicer arietinum]
          Length = 521

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  W+ +I+GYA+ G++K A  LF++MP R   SW  M++ YA+ G++E AR LFD +P
Sbjct: 174 DVVAWSSLIAGYAKRGDLKVARKLFDEMPERDLVSWNVMITGYAKQGEMESARMLFDEAP 233

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRY-GVRPNLCTYMTVLNICGFQSDLEQG 358
             ++VV+WNA+I GY       +AL +F  M R  GV P+  T +++L+ C    DLE G
Sbjct: 234 V-KDVVSWNAVIAGYVVCRLNRQALELFDEMSRVGGVYPDEVTLLSLLSACAELGDLENG 292

Query: 359 MQIH 370
            ++H
Sbjct: 293 RKVH 296


>ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Fragaria vesca subsp. vesca]
          Length = 729

 Score =  103 bits (256), Expect = 3e-20
 Identities = 53/122 (43%), Positives = 75/122 (61%)
 Frame = +2

Query: 2   DVGIWNRMISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFDMSP 181
           DV  WN +++GY   G +  A  +F+ M  +S  SW++M+SAYA+ G++EEA+RLFD  P
Sbjct: 259 DVVSWNTLVAGYCVSGEVGEARRVFDGMVEKSSFSWSTMISAYAKLGELEEAQRLFDAVP 318

Query: 182 CHENVVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGM 361
              NVV+WNAMI GY QN    EA+ +F  M   G+ PN  T ++VL+ C     L+ G 
Sbjct: 319 -QRNVVSWNAMIAGYAQNEKYDEAVGLFREMQECGLAPNDVTLVSVLSACAHLGALDLGK 377

Query: 362 QI 367
            I
Sbjct: 378 WI 379


>ref|XP_004509094.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cicer arietinum]
          Length = 632

 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/119 (42%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
 Frame = +2

Query: 23  MISGYARDGNIKAAEALFNQMPSRSQASWTSMMSAYARHGKIEEARRLFD---MSPCHEN 193
           ++ GYAR G++ +AE LF++MP RS  S T+M++ Y +HGK+ EAR LFD   +     +
Sbjct: 163 LVDGYARGGDVFSAEKLFDKMPERSLVSLTTMLTCYTKHGKLREARSLFDEMEVGGSDRD 222

Query: 194 VVTWNAMITGYGQNWCKPEALMMFGRMMRYGVRPNLCTYMTVLNICGFQSDLEQGMQIH 370
           VV WN MI GY  N    E+L++F +M+   VRPN  T + VL+ CG    L+ G  +H
Sbjct: 223 VVCWNVMIDGYASNGFPNESLLLFRKMLVEKVRPNEITLVAVLSSCGQLGTLDSGRWVH 281