BLASTX nr result
ID: Ephedra28_contig00027523
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00027523
(689 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845101.1| hypothetical protein AMTR_s00005p00164560 [A... 377 e-102
ref|XP_001785468.1| predicted protein [Physcomitrella patens] gi... 373 e-101
ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Sela... 360 3e-97
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 357 1e-96
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 355 7e-96
gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indi... 353 2e-95
ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group] g... 353 2e-95
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 351 1e-94
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 350 2e-94
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr... 350 3e-94
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 349 4e-94
ref|XP_004957260.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 349 5e-94
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao] 348 7e-94
ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 348 7e-94
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe... 348 9e-94
ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [S... 348 9e-94
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t... 344 1e-92
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 343 2e-92
ref|XP_006661399.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 343 4e-92
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [... 343 4e-92
>ref|XP_006845101.1| hypothetical protein AMTR_s00005p00164560 [Amborella trichopoda]
gi|548847614|gb|ERN06776.1| hypothetical protein
AMTR_s00005p00164560 [Amborella trichopoda]
Length = 477
Score = 377 bits (967), Expect = e-102
Identities = 177/229 (77%), Positives = 200/229 (87%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEFDG+F+G V+YKVTSVIGH+FS DFPPA+QNWET NP+DLF+API+K E NPKA
Sbjct: 34 TDVHEFDGLFQGFNVHYKVTSVIGHVFSVDFPPAYQNWETINPLDLFQAPILKTEANPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
I RHL QEARGC YLVLWLDCDREGENICFEV++CT G++V+RARFS+VTE
Sbjct: 94 RIARHLSQEARGCKYLVLWLDCDREGENICFEVIECTGIHPMDG-GRRVYRARFSSVTES 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DI AM LVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ
Sbjct: 153 DIRKAMQNLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQITTF+PE FW + PYI+K GY+L L+WDR++VFD D
Sbjct: 213 TPTLGFCVQRYLQITTFRPEKFWSLHPYISKSGYELRLEWDRSRVFDLD 261
>ref|XP_001785468.1| predicted protein [Physcomitrella patens]
gi|162662910|gb|EDQ49709.1| predicted protein
[Physcomitrella patens]
Length = 869
Score = 373 bits (958), Expect = e-101
Identities = 168/228 (73%), Positives = 204/228 (89%)
Frame = +1
Query: 4 DVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKAN 183
+VHEFDG F+G V +KVTSVIGH+ S DFPP +Q+W+TT+P +LFEAP IK E+NPKA+
Sbjct: 35 EVHEFDGSFRGTSVRFKVTSVIGHVLSIDFPPKYQSWDTTDPFELFEAPTIKNESNPKAH 94
Query: 184 ICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTERD 363
+C+HLQQEARGCDYLVLWLDCDREGENICFEVM+ V LRK GQ+VFRA+FSA++E+D
Sbjct: 95 VCKHLQQEARGCDYLVLWLDCDREGENICFEVMESAVPVLRKLPGQQVFRAKFSAISEKD 154
Query: 364 ILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQT 543
+ AMN L EPNK+E+L+VDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQT
Sbjct: 155 VRVAMNTLGEPNKDESLSVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQT 214
Query: 544 PTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
PTLGFCVERHL+ITTF P+PFW+V+P+++K G+QL L+WDR ++FD++
Sbjct: 215 PTLGFCVERHLRITTFVPQPFWVVRPHLSKGGHQLMLEWDRNRLFDRE 262
>ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Selaginella moellendorffii]
gi|300165828|gb|EFJ32435.1| hypothetical protein
SELMODRAFT_168492 [Selaginella moellendorffii]
Length = 871
Score = 360 bits (923), Expect = 3e-97
Identities = 162/227 (71%), Positives = 197/227 (86%)
Frame = +1
Query: 4 DVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKAN 183
DVHEFDG F+G + +YKVTSVIGH++ DFPP +QNWE T+P+DLF AP +K E NPKA+
Sbjct: 19 DVHEFDGTFRGFQAHYKVTSVIGHVYGIDFPPKYQNWELTDPLDLFGAPTLKNEANPKAH 78
Query: 184 ICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTERD 363
+C+HL+QEARGCD LVLWLDCDREGENICFEVM+ + ++KR+GQ+VFRARFSAV+E+D
Sbjct: 79 VCKHLRQEARGCDSLVLWLDCDREGENICFEVMENALPVMKKRSGQQVFRARFSAVSEKD 138
Query: 364 ILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQT 543
+ AM+ LVEPN+NEALAVDARQEIDLKVGVAFTRFQTR+FQGKYGNLDSSVIS+GPCQT
Sbjct: 139 VKTAMSSLVEPNQNEALAVDARQEIDLKVGVAFTRFQTRFFQGKYGNLDSSVISFGPCQT 198
Query: 544 PTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDK 684
PTLGFCVERH QI TF P+PFW + P ++K G+ L L W+R +VF++
Sbjct: 199 PTLGFCVERHTQIITFVPKPFWTLHPRLSKGGHSLQLDWERGRVFEQ 245
>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
Length = 864
Score = 357 bits (917), Expect = 1e-96
Identities = 164/229 (71%), Positives = 196/229 (85%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEFD +F G++ +YKVTSVIGH+FS DFP AFQ+W TTNP DLF+API+K ETNPKA
Sbjct: 34 TEVHEFDAMFLGSRAHYKVTSVIGHVFSVDFPAAFQDWTTTNPSDLFQAPILKKETNPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+ICRHL QEARGC +LVLWLDCDREGENICFEV++CT G++++RARFS+VTE+
Sbjct: 94 HICRHLSQEARGCTHLVLWLDCDREGENICFEVIECT--GFHTSDGRRIYRARFSSVTEK 151
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AMN L EPN++EAL+VDARQEIDLKVGVAFTRFQT YF GKYGNLD+ VISYGPCQ
Sbjct: 152 DILKAMNSLAEPNRDEALSVDARQEIDLKVGVAFTRFQTSYFNGKYGNLDARVISYGPCQ 211
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R LQIT FKPE FW++ PYI GY+L L+W+R+++FD D
Sbjct: 212 TPTLGFCVDRFLQITMFKPEKFWMLHPYIMYKGYELKLEWERSRLFDAD 260
>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
tuberosum]
Length = 860
Score = 355 bits (911), Expect = 7e-96
Identities = 163/229 (71%), Positives = 197/229 (86%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEFD +F G++ +YKVTSVIGH+FS DFP AFQ+W TTNP DLF+API+K ETNPKA
Sbjct: 34 TEVHEFDAMFLGSRAHYKVTSVIGHVFSVDFPAAFQDWTTTNPSDLFQAPILKKETNPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+ICRHL QEARGC +LVLWLDCDREGENI FEV++CT G++++RARFS+VTE+
Sbjct: 94 HICRHLSQEARGCTHLVLWLDCDREGENISFEVIECT--GFHTSDGRRIYRARFSSVTEK 151
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AMN LVEPN++EAL+VDARQEIDLKVGV+FTRFQT YF GKYGNLD+ VISYGPCQ
Sbjct: 152 DILKAMNNLVEPNRDEALSVDARQEIDLKVGVSFTRFQTSYFNGKYGNLDARVISYGPCQ 211
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQIT FKPE FW++ PYI GY+L L+W+R+++FD D
Sbjct: 212 TPTLGFCVDRYLQITMFKPEKFWMLHPYIMYKGYELKLEWERSRLFDAD 260
>gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indica Group]
Length = 866
Score = 353 bits (907), Expect = 2e-95
Identities = 163/229 (71%), Positives = 198/229 (86%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEFDG+F+G+ ++KVTSVIGH+ S DFPPA+QNWE T+P+DLF AP+++ E NPKA
Sbjct: 34 TDVHEFDGMFQGSHAFFKVTSVIGHVLSVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARGC YLVLWLDCDREGENIC+EV+DCT + G+++FRA+FS+VTE+
Sbjct: 94 HIRRHLAQEARGCTYLVLWLDCDREGENICYEVIDCTGIP-KSEVGRRIFRAKFSSVTEK 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DI++AMN LV P+K+EALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQ
Sbjct: 153 DIMDAMNNLVLPSKDEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+ QITTFKPE FW ++ Y+ K G ++ L+WDR K+FD D
Sbjct: 213 TPTLGFCVQRYQQITTFKPEKFWSLKTYVIKDGNEIQLEWDRKKLFDFD 261
>ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa
Japonica Group] gi|215695029|dbj|BAG90220.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 866
Score = 353 bits (907), Expect = 2e-95
Identities = 163/229 (71%), Positives = 198/229 (86%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEFDG+F+G+ ++KVTSVIGH+ S DFPPA+QNWE T+P+DLF AP+++ E NPKA
Sbjct: 34 TDVHEFDGMFQGSHAFFKVTSVIGHVLSVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARGC YLVLWLDCDREGENIC+EV+DCT + G+++FRA+FS+VTE+
Sbjct: 94 HIRRHLAQEARGCTYLVLWLDCDREGENICYEVIDCTGIP-KSEVGRRIFRAKFSSVTEK 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DI++AMN LV P+K+EALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQ
Sbjct: 153 DIMDAMNNLVLPSKDEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+ QITTFKPE FW ++ Y+ K G ++ L+WDR K+FD D
Sbjct: 213 TPTLGFCVQRYQQITTFKPEKFWSLKTYVIKDGNEIQLEWDRKKLFDFD 261
>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 867
Score = 351 bits (900), Expect = 1e-94
Identities = 166/229 (72%), Positives = 195/229 (85%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEFDG F G YYKVTSVIGH+FS DF FQ+W++T+P+DLF+A +IK E+NPKA
Sbjct: 35 TEVHEFDGRFLGHHAYYKVTSVIGHVFSIDFQAGFQDWKSTDPLDLFQASVIKTESNPKA 94
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+IC+HL +EARGCD LVLWLDCDREGENICFEV++CT T +KV+RARFS+VTE+
Sbjct: 95 HICQHLSREARGCDCLVLWLDCDREGENICFEVIECTGFG-GNGTRKKVYRARFSSVTEK 153
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL A++ LVEPN+NEALAVDARQEIDLKVGVAFTRFQT +FQGKYGNLDS +ISYGPCQ
Sbjct: 154 DILKALDNLVEPNRNEALAVDARQEIDLKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQ 213
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+RHLQITTFKPE FW V PYI + GY+L L W+R K+FD D
Sbjct: 214 TPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYELNLDWERGKLFDCD 262
>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
sinensis]
Length = 867
Score = 350 bits (898), Expect = 2e-94
Identities = 162/229 (70%), Positives = 193/229 (84%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEFDG+F G+ Y KVTSV+GH+F DFPPA+Q+W +NP+DLF+AP+ K E+N K
Sbjct: 35 TEVHEFDGMFLGSHAYIKVTSVVGHVFRLDFPPAYQDWNASNPLDLFQAPVHKAESNRKV 94
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+ICRHL QEARGC +LVLWLDCDREGENICFEV++CT Q+ +KV RARFS+VTE+
Sbjct: 95 HICRHLNQEARGCGHLVLWLDCDREGENICFEVIECTGFQVNDAR-RKVHRARFSSVTEK 153
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AM LVEPN+NEALAVDARQEIDLKVGVAFTRFQT YFQGKYGNLDS ISYGPCQ
Sbjct: 154 DILKAMGNLVEPNRNEALAVDARQEIDLKVGVAFTRFQTTYFQGKYGNLDSRFISYGPCQ 213
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQIT+FKPE FW + PY+ + GY+L L+W+R K+FD D
Sbjct: 214 TPTLGFCVQRYLQITSFKPEKFWTLHPYLVQNGYELKLEWERQKLFDFD 262
>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222861878|gb|EEE99420.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 837
Score = 350 bits (897), Expect = 3e-94
Identities = 164/229 (71%), Positives = 194/229 (84%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEF+G+F G + Y+KVTSVIGH+FS DFP +Q+W T+P DLF+API K E NPKA
Sbjct: 8 TEVHEFEGMFNGFRAYFKVTSVIGHVFSVDFPAKYQDWAATDPADLFQAPIHKAEANPKA 67
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+ICRHL QEARGC++LVLWLDCDREGENICFEV+ CT Q +KV+RARFS+VTE+
Sbjct: 68 HICRHLSQEARGCNHLVLWLDCDREGENICFEVIQCTGFQANDDR-RKVYRARFSSVTEK 126
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AMN LVEPN+ EALAVDARQEIDLKVGVAFTRFQT +FQGKYGNLDS VISYGPCQ
Sbjct: 127 DILKAMNCLVEPNEYEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQ 186
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQITTFKPE FW ++P++ GY+L L+W+R K+FD D
Sbjct: 187 TPTLGFCVQRYLQITTFKPEKFWALRPHVMVDGYELQLEWERHKLFDLD 235
>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 864
Score = 349 bits (896), Expect = 4e-94
Identities = 165/229 (72%), Positives = 195/229 (85%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEFDG F G YYKVTSVIGH+FS DF FQ+W++T+P+DLF+A +IK E+NPKA
Sbjct: 32 TEVHEFDGRFLGHHAYYKVTSVIGHVFSIDFQAGFQDWKSTDPLDLFQASVIKTESNPKA 91
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+IC+HL +EARGCD LVLWLDCDREGENICFEV++C+ T +KV+RARFS+VTE+
Sbjct: 92 HICQHLSREARGCDCLVLWLDCDREGENICFEVIECSGFG-GNGTRKKVYRARFSSVTEK 150
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL A++ LVEPN+NEALAVDARQEIDLKVGVAFTRFQT +FQGKYGNLDS +ISYGPCQ
Sbjct: 151 DILKALDNLVEPNRNEALAVDARQEIDLKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQ 210
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+RHLQITTFKPE FW V PYI + GY+L L W+R K+FD D
Sbjct: 211 TPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYELNLDWERGKLFDCD 259
>ref|XP_004957260.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Setaria italica]
Length = 868
Score = 349 bits (895), Expect = 5e-94
Identities = 161/229 (70%), Positives = 196/229 (85%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TD+HEFDG+F+G+ +KVTSVIGH+ S DFPPA+QNW+ T+P+DLFEAP+++ E NPKA
Sbjct: 34 TDIHEFDGMFQGSYANFKVTSVIGHVLSVDFPPAYQNWDGTDPMDLFEAPVLRSECNPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QE RGC YL+LWLDCDREGENIC+EV++CT G+++FRARFS+VTE+
Sbjct: 94 HIRRHLAQEVRGCTYLILWLDCDREGENICYEVIECTGIP-ENEAGRRIFRARFSSVTEK 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL+AM+ LV PNK+EAL+VDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQ
Sbjct: 153 DILSAMDNLVLPNKDEALSVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+ QITTFKPE FW ++ YI K G ++ L+WDR K+FD D
Sbjct: 213 TPTLGFCVQRYQQITTFKPEKFWSLKTYIIKNGDEIQLEWDRKKLFDFD 261
>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
Length = 868
Score = 348 bits (894), Expect = 7e-94
Identities = 163/229 (71%), Positives = 194/229 (84%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEF+G F G +YKVTSVIGH+FS DFP ++Q+W TNP+DLF+A +IK E+NPKA
Sbjct: 36 TEVHEFNGTFLGFNAHYKVTSVIGHVFSVDFPASYQDWNVTNPLDLFQASVIKTESNPKA 95
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARGC YLVLWLDCDREGENICFEV++CT + + ++V+RARFS+VTE+
Sbjct: 96 HISRHLSQEARGCGYLVLWLDCDREGENICFEVIECTGFHMNEAK-KRVYRARFSSVTEK 154
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DI AM+ LVEPN++EALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQ
Sbjct: 155 DISKAMDNLVEPNRHEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQ 214
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQI TFKPE FW ++PYI + GY L L+W R K+FD D
Sbjct: 215 TPTLGFCVQRYLQINTFKPEKFWALRPYIIQNGYDLQLEWKRQKLFDID 263
>ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Brachypodium
distachyon]
Length = 868
Score = 348 bits (894), Expect = 7e-94
Identities = 159/229 (69%), Positives = 195/229 (85%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEFDG F+G++ +++VTSVIGH+FS DFPPA+QNWE T+P+DLF AP+++ E NPK
Sbjct: 34 TDVHEFDGTFQGSQAFFRVTSVIGHVFSVDFPPAYQNWEGTDPVDLFNAPVLRSECNPKV 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARGC YL+LWLDCDREGENIC+EV++CT G+++FRA+FS+VTE+
Sbjct: 94 HIRRHLAQEARGCTYLILWLDCDREGENICYEVINCTGIP-ENEVGRRIFRAKFSSVTEK 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DI NAM+ LV PNK+EAL+VDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQ
Sbjct: 153 DISNAMDNLVLPNKDEALSVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+ QI TFKPE FW ++ Y+ K G ++ L+WDR K+FD D
Sbjct: 213 TPTLGFCVQRYQQINTFKPEKFWSLRTYVIKDGDEIQLEWDRKKLFDFD 261
>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
Length = 866
Score = 348 bits (893), Expect = 9e-94
Identities = 166/229 (72%), Positives = 193/229 (84%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEF+G+F G V++KVTSVIGH+FS DFP +QNW TT+P+DLF+API K E NPKA
Sbjct: 35 TDVHEFEGMFLGFHVHFKVTSVIGHVFSVDFPEKYQNWTTTDPLDLFQAPIQKTEANPKA 94
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARG LVLWLDCDREGENICFEVMDC T ++++RARFS+VTE+
Sbjct: 95 HIRRHLSQEARGYGNLVLWLDCDREGENICFEVMDCIGHS--NETRRRIYRARFSSVTEK 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AM+ LVEPNK+EALAVDARQEIDLKVGVAFTRFQT +FQGKYGNLDS VISYGPCQ
Sbjct: 153 DILKAMDNLVEPNKDEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQI TFKPE FW V+PYI + GY+L L+W+R K+FD D
Sbjct: 213 TPTLGFCVQRYLQINTFKPEKFWAVRPYIMQKGYELQLEWERNKLFDYD 261
>ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [Sorghum bicolor]
gi|241923856|gb|EER97000.1| hypothetical protein
SORBIDRAFT_02g029000 [Sorghum bicolor]
Length = 866
Score = 348 bits (893), Expect = 9e-94
Identities = 163/229 (71%), Positives = 194/229 (84%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEFDG F+G+ +KVTSVIGH+ S DFPPA+QNWE T+P+DLFEAP+++ E NPKA
Sbjct: 34 TDVHEFDGTFQGSYANFKVTSVIGHVLSVDFPPAYQNWEATDPLDLFEAPVLRSECNPKA 93
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARGC YL+LWLDCDREGENIC+EV++CT G+++FRARFS+VTE+
Sbjct: 94 HIRRHLAQEARGCTYLILWLDCDREGENICYEVIECTGIP---DNGRRIFRARFSSVTEK 150
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AM+ LV PNK+EAL+VDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQ
Sbjct: 151 DILTAMDNLVLPNKDEALSVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQ 210
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+ QITTFKPE FW ++ YI K ++ L+WDR K+FD D
Sbjct: 211 TPTLGFCVQRYQQITTFKPEKFWSLKTYIIKDSDEIQLEWDRKKLFDFD 259
>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 865
Score = 344 bits (883), Expect = 1e-92
Identities = 159/227 (70%), Positives = 193/227 (85%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEFDG+F+G K +Y+VTSVIGH+FS DFP +QNW T +P DLF+APIIK E+NPKA
Sbjct: 36 TEVHEFDGMFRGFKAHYRVTSVIGHVFSVDFPEKYQNWATIDPQDLFDAPIIKKESNPKA 95
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+ICRHL EARGC Y+VLWLDCDREGENICFEV++ T + K + +KV+RARFS+VTE+
Sbjct: 96 HICRHLSNEARGCSYMVLWLDCDREGENICFEVIESTGFDM-KDSKRKVYRARFSSVTEK 154
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DI AM+ LVEPN++EALAVDARQEIDLKVGVAF+RFQT YFQGKY NLD VISYGPCQ
Sbjct: 155 DISKAMDNLVEPNRDEALAVDARQEIDLKVGVAFSRFQTSYFQGKYQNLDCRVISYGPCQ 214
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFD 681
TPTLGFCV+R++ I TFKPE FW ++PYI K GY+L L+W+R ++FD
Sbjct: 215 TPTLGFCVQRYMHINTFKPEKFWALRPYIRKDGYELQLEWERRRLFD 261
>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
vesca]
Length = 862
Score = 343 bits (881), Expect = 2e-92
Identities = 164/229 (71%), Positives = 190/229 (82%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
TDVHEF+G F+G V +KVTSVIGH+FS DFP +QNW T+P+DLF+AP+ K E NPKA
Sbjct: 35 TDVHEFEGTFRGYHVQFKVTSVIGHVFSLDFPETYQNWTVTDPLDLFQAPVRKAEANPKA 94
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTER 360
+I RHL QEARG LVLWLDCDREGENICFEV+DC T +KV+RARFS+VTE+
Sbjct: 95 HIRRHLSQEARGFGNLVLWLDCDREGENICFEVIDCIGHT--NETKRKVYRARFSSVTEK 152
Query: 361 DILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQ 540
DIL AM+ LVEPNK+EALAVDARQEIDLKVGVAFTRFQT +FQGKYGNLD+ VISYGPCQ
Sbjct: 153 DILKAMDNLVEPNKDEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDARVISYGPCQ 212
Query: 541 TPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
TPTLGFCV+R+LQI TFKPE FW V+PYI + GY+L L W+R K+FD D
Sbjct: 213 TPTLGFCVQRYLQINTFKPEKFWSVRPYILQSGYELQLDWERNKLFDVD 261
>ref|XP_006661399.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Oryza brachyantha]
Length = 983
Score = 343 bits (879), Expect = 4e-92
Identities = 166/259 (64%), Positives = 197/259 (76%), Gaps = 30/259 (11%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFST------------------------------D 90
TDVHEFDG+F+G+ ++KVTSVIGH+ T D
Sbjct: 119 TDVHEFDGMFQGSHAFFKVTSVIGHVLRTIVNIADINVFSADPEHKDHLCAFIIIIIFVD 178
Query: 91 FPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENIC 270
FPPA+QNWE T+P+DLF AP+++ E NPKA+I RHL QEARGC YLVLWLDCDREGENIC
Sbjct: 179 FPPAYQNWEGTDPMDLFSAPVLRSECNPKAHIRRHLSQEARGCTYLVLWLDCDREGENIC 238
Query: 271 FEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKV 450
+EV+DCT G+++FRA+FS+VTE+DIL+AMN LV PNKNEALAVDARQEIDLKV
Sbjct: 239 YEVIDCTGIP-ENEVGRRIFRAKFSSVTEKDILDAMNNLVLPNKNEALAVDARQEIDLKV 297
Query: 451 GVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYIN 630
GVAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+ QITTFKPE FW ++ Y+
Sbjct: 298 GVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYVI 357
Query: 631 KIGYQLCLQWDRAKVFDKD 687
K G ++ L+WDR K+FD D
Sbjct: 358 KDGNEIQLEWDRKKLFDFD 376
>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
Length = 894
Score = 343 bits (879), Expect = 4e-92
Identities = 162/232 (69%), Positives = 194/232 (83%), Gaps = 3/232 (1%)
Frame = +1
Query: 1 TDVHEFDGIFKGAKVYYKVTSVIGHIFSTDFPPAFQNWETTNPIDLFEAPIIKGETNPKA 180
T+VHEF+G F+G+ YKVTSVIGH+FS DFP +Q+W T+P+DLF+API+K E+NPKA
Sbjct: 63 TEVHEFNGTFRGSNAQYKVTSVIGHVFSVDFPAKYQDWTVTDPLDLFQAPILKAESNPKA 122
Query: 181 NICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTV---DQLRKRTGQKVFRARFSAV 351
+I RHL QEAR C +LVLWLDCDREGENICFEV++CT ++ R+R V+RARFS+V
Sbjct: 123 HIRRHLSQEARDCGHLVLWLDCDREGENICFEVVECTGFHGNEARRR----VYRARFSSV 178
Query: 352 TERDILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYG 531
TE+DIL AM+ LVEPN++EA AVDARQEIDLKVGVAFTRFQT YFQGKYGNLDS VISYG
Sbjct: 179 TEKDILKAMDNLVEPNEDEARAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDSRVISYG 238
Query: 532 PCQTPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKD 687
PCQTPTLGFCV+R+LQI TFKPE FW + PYI GY+L L+W+R K+FD D
Sbjct: 239 PCQTPTLGFCVQRYLQINTFKPEKFWALHPYITHNGYELQLEWERNKLFDLD 290