BLASTX nr result
ID: Ephedra28_contig00027504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00027504
(373 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17974.1| unknown [Picea sitchensis] 84 3e-14
ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [A... 70 3e-10
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002525676.1| transcription initiation factor brf1, putati... 67 3e-09
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 65 9e-09
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 65 9e-09
gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative is... 61 2e-07
ref|XP_002981027.1| hypothetical protein SELMODRAFT_444750 [Sela... 61 2e-07
ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 60 2e-07
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 60 2e-07
ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 60 2e-07
ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 60 2e-07
ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citr... 60 2e-07
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 60 2e-07
ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Popu... 60 4e-07
ref|XP_002982504.1| hypothetical protein SELMODRAFT_421928 [Sela... 58 1e-06
ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Popu... 56 6e-06
ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa ... 55 1e-05
>gb|ABR17974.1| unknown [Picea sitchensis]
Length = 746
Score = 83.6 bits (205), Expect = 3e-14
Identities = 49/116 (42%), Positives = 63/116 (54%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+LKT+IWTEMNK+Y L
Sbjct: 529 RLKTLIWTEMNKEYLEEQAAKEEAIAAAEAAHAAALAAAAEGAPDAVELAAAAAAAVAKL 588
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDEKKEDATE 26
K++ KRAEE+ KVPA+SAAEATRQ+L KKKLSSKVNYDVL+KLF++ K++ T+
Sbjct: 589 KKDKQRKRAEESKNKVPAQSAAEATRQMLTKKKLSSKVNYDVLEKLFEDNKKNGTD 644
>ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [Amborella trichopoda]
gi|548830636|gb|ERM93559.1| hypothetical protein
AMTR_s00004p00092300 [Amborella trichopoda]
Length = 737
Score = 70.1 bits (170), Expect = 3e-10
Identities = 48/127 (37%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+LKTIIWTEMNK+Y
Sbjct: 504 RLKTIIWTEMNKEYLEEQAAKEAAAAAARAAYEADIANCHGDALELAKATAAAIAKMKK- 562
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE----KKEDATE 26
++ KRAEE PA++AAEATRQ+L KKK+SSK+NY+VL KLFDE K E T+
Sbjct: 563 --DKQQKRAEEARNATPAQTAAEATRQMLTKKKISSKINYEVLNKLFDEETPAKDEGKTQ 620
Query: 25 FLDNEVV 5
D E V
Sbjct: 621 DGDAEEV 627
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
ER KRA E VPA++AAEATRQ+L KK+LSSK+NYDVL+KLFD+
Sbjct: 502 ERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDD 548
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/109 (37%), Positives = 51/109 (46%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+ K IIW EMN++Y L
Sbjct: 439 QFKKIIWEEMNREYLEEQAAKEAVAAAAKEAWEAKFKDCPEEMQAARELEAAVAAALAKS 498
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
KE+ KRA E VPA+SA+EA RQ+L KK+LSSK+NYDVL+KLFDE
Sbjct: 499 KKEKQQKRAAEAKNSVPAQSASEAARQMLTKKRLSSKINYDVLEKLFDE 547
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/107 (39%), Positives = 49/107 (45%)
Frame = -1
Query: 367 KTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXK 188
K IIW EMN++Y L K
Sbjct: 485 KKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSRK 544
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
ER KRA E PA++AAEATRQ+L KK+LSSK+NYDVL KLFDE
Sbjct: 545 ERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDE 591
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/107 (39%), Positives = 49/107 (45%)
Frame = -1
Query: 367 KTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXK 188
K IIW EMN++Y L K
Sbjct: 485 KKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSRK 544
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
ER KRA E PA++AAEATRQ+L KK+LSSK+NYDVL KLFDE
Sbjct: 545 ERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDE 591
>gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao]
Length = 605
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/109 (34%), Positives = 49/109 (44%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+ K IIW EMN++Y L
Sbjct: 425 RFKKIIWEEMNREYLEEQAAKEAAAAAAKEANMANYDKCPEDLQAAQELAAAAAAVVAKS 484
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
KER KRA E P ++AAEATR++L +K+LSSK+NYD L+KLFDE
Sbjct: 485 RKERQQKRAAEAKNSGPPQTAAEATRRMLARKRLSSKINYDALEKLFDE 533
>ref|XP_002981027.1| hypothetical protein SELMODRAFT_444750 [Selaginella moellendorffii]
gi|300151081|gb|EFJ17728.1| hypothetical protein
SELMODRAFT_444750 [Selaginella moellendorffii]
Length = 636
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/119 (34%), Positives = 60/119 (50%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+LKTI+WTEMNK+Y +
Sbjct: 467 RLKTIVWTEMNKEYIQEQEAKEAALKAQAESMAAVSTSGTAAEIAAATV--------VMS 518
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDEKKEDATEFLD 17
K R +K + TA PAESAAEATRQ+L KK+LSSK+NY VL+K+F+ K++ +++++
Sbjct: 519 RKARKHKHGD-TANCKPAESAAEATRQMLEKKRLSSKLNYSVLEKMFNGKEDSPSKWVE 576
>ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Citrus sinensis]
Length = 618
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/107 (35%), Positives = 49/107 (45%)
Frame = -1
Query: 367 KTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXK 188
K IIW EMN++Y L K
Sbjct: 437 KKIIWEEMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRK 496
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
E+ KRA E PA++A EATR++L KK+LSSK+NYDVL+KLFD+
Sbjct: 497 EKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD 543
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = -1
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
E+ KRA E PA++AAEAT+Q+L KK+LS+K+NYDVL+KLFD+
Sbjct: 507 EKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDD 553
>ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|568851023|ref|XP_006479194.1| PREDICTED:
transcription factor IIIB 90 kDa subunit-like isoform X1
[Citrus sinensis] gi|557545784|gb|ESR56762.1|
hypothetical protein CICLE_v10019321mg [Citrus
clementina]
Length = 620
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/107 (35%), Positives = 49/107 (45%)
Frame = -1
Query: 367 KTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXK 188
K IIW EMN++Y L K
Sbjct: 439 KKIIWEEMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRK 498
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
E+ KRA E PA++A EATR++L KK+LSSK+NYDVL+KLFD+
Sbjct: 499 EKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD 545
>ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|567902066|ref|XP_006443521.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545782|gb|ESR56760.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545783|gb|ESR56761.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 543
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/107 (35%), Positives = 49/107 (45%)
Frame = -1
Query: 367 KTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXK 188
K IIW EMN++Y L K
Sbjct: 362 KKIIWEEMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRK 421
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
E+ KRA E PA++A EATR++L KK+LSSK+NYDVL+KLFD+
Sbjct: 422 EKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD 468
>ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|557545781|gb|ESR56759.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 567
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/107 (35%), Positives = 49/107 (45%)
Frame = -1
Query: 367 KTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXK 188
K IIW EMN++Y L K
Sbjct: 439 KKIIWEEMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRK 498
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
E+ KRA E PA++A EATR++L KK+LSSK+NYDVL+KLFD+
Sbjct: 499 EKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD 545
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = -1
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
E+ KRA E PA++AAEAT+Q+L KK+LS+K+NYDVL+KLFD+
Sbjct: 507 EKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDD 553
>ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Populus trichocarpa]
gi|550348149|gb|ERP66119.1| hypothetical protein
POPTR_0001s25330g [Populus trichocarpa]
Length = 508
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/109 (34%), Positives = 49/109 (44%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+ K IIW EMN++Y L
Sbjct: 326 RYKKIIWEEMNREYLQEQEAKEAATATHKEAWEENFKNCPEDLQAARKLDAAVKADLAKS 385
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
KE KRA E VPA+SAAEA ++L KK++SSK+NYDVL+KLF+E
Sbjct: 386 KKEMQQKRAAEARNSVPAKSAAEAVHRMLTKKRISSKINYDVLEKLFEE 434
>ref|XP_002982504.1| hypothetical protein SELMODRAFT_421928 [Selaginella moellendorffii]
gi|300149603|gb|EFJ16257.1| hypothetical protein
SELMODRAFT_421928 [Selaginella moellendorffii]
Length = 588
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 41/49 (83%)
Frame = -1
Query: 163 ETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDEKKEDATEFLD 17
+TA PAESAAEATRQ+L KK+LSSK+NY VL+K+F+ K++ +++++
Sbjct: 480 DTANCKPAESAAEATRQMLEKKRLSSKLNYSVLEKMFNGKEDSPSKWVE 528
>ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Populus trichocarpa]
gi|550331015|gb|EEE88095.2| hypothetical protein
POPTR_0009s04400g [Populus trichocarpa]
Length = 562
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/109 (33%), Positives = 47/109 (43%)
Frame = -1
Query: 373 KLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXX 194
+ K IIW EMN++Y L
Sbjct: 397 RYKKIIWEEMNREYLQEQAAKEAAAATLKKAWEENFKNCPEDLQAAKKLDAAVKADLAKS 456
Query: 193 XKERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFDE 47
KE KRA E PA+SAAEA ++L KK+L SK+NYDVL+KLF++
Sbjct: 457 KKETQQKRASEARNLAPAKSAAEAVHRMLTKKRLGSKINYDVLEKLFED 505
>ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Fragaria
vesca subsp. vesca]
Length = 620
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Frame = -1
Query: 187 ERTYKRAEETAKKVPAESAAEATRQILIKKKLSSKVNYDVLQKLFD-------EKKEDAT 29
ER RA E PA++AAEA Q+L KK+LSSK+N+DVL+ +F+ KK
Sbjct: 498 ERQLARAAEAKNSTPAQTAAEAVHQMLTKKRLSSKINFDVLEDMFETSEGPDVSKKRKID 557
Query: 28 EFLDNE 11
LDN+
Sbjct: 558 SHLDND 563