BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027382
         (841 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006830235.1| hypothetical protein AMTR_s00130p00061410 [A...   104   3e-20
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   103   6e-20
gb|ESW20003.1| hypothetical protein PHAVU_006G172900g [Phaseolus...   101   4e-19
ref|XP_002305724.2| hypothetical protein POPTR_0004s06030g [Popu...   100   5e-19
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...    99   2e-18
gb|EOY27924.1| AAA-type ATPase family protein isoform 3 [Theobro...    98   3e-18
gb|EOY27923.1| AAA-type ATPase family protein isoform 2 [Theobro...    98   3e-18
gb|EOY27922.1| AAA-type ATPase family protein isoform 1 [Theobro...    98   3e-18
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...    98   3e-18
ref|XP_006594536.1| PREDICTED: protein STICHEL-like 3-like [Glyc...    97   9e-18
ref|XP_003547181.1| PREDICTED: protein STICHEL-like 3-like [Glyc...    97   9e-18
gb|EXC10952.1| DNA polymerase III subunit [Morus notabilis]            96   1e-17
gb|EXC68992.1| DNA polymerase III subunit [Morus notabilis]            96   2e-17
ref|XP_006358095.1| PREDICTED: protein STICHEL-like 3-like [Sola...    96   2e-17
ref|XP_004485931.1| PREDICTED: uncharacterized protein LOC101514...    96   2e-17
ref|XP_002317391.1| hypothetical protein POPTR_0011s06860g [Popu...    94   5e-17
gb|EMJ15765.1| hypothetical protein PRUPE_ppa000454mg [Prunus pe...    94   8e-17
ref|XP_004293975.1| PREDICTED: uncharacterized protein LOC101304...    93   1e-16
ref|XP_004233028.1| PREDICTED: uncharacterized protein LOC101268...    92   2e-16
ref|XP_006467605.1| PREDICTED: protein STICHEL-like 3-like [Citr...    90   9e-16

>ref|XP_006830235.1| hypothetical protein AMTR_s00130p00061410 [Amborella trichopoda]
           gi|548836458|gb|ERM97651.1| hypothetical protein
           AMTR_s00130p00061410 [Amborella trichopoda]
          Length = 1219

 Score =  104 bits (260), Expect = 3e-20
 Identities = 54/96 (56%), Positives = 65/96 (67%)
 Frame = -2

Query: 321 ELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSH 142
           E  VTQ P+N CGIPWNWSR+H RGKTILD+AG+SLSCG+SDS  RK++   P    SS 
Sbjct: 291 ETEVTQDPRNVCGIPWNWSRIHHRGKTILDKAGRSLSCGISDSKQRKVDYPAPQEGPSSQ 350

Query: 141 TDASVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
            D   I G+   S+ S+  D +ALPLL EP  SH S
Sbjct: 351 RDDLNILGASACSSPSMREDSDALPLLVEPSGSHGS 386


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score =  103 bits (258), Expect = 6e-20
 Identities = 58/103 (56%), Positives = 69/103 (66%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT++P+NGCGIPWNWSR+H RGKT LD AG+SLSCGLSDS  RK  G+  H       DA
Sbjct: 317 VTRAPRNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLRK-GGMASH-----DRDA 370

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHESLGKD*NNAGF 4
             +P + + S SS  SD EALPLL E  LS ES     +NAG+
Sbjct: 371 PNMPLASDYSCSSTKSDAEALPLLVEASLSQEST----DNAGW 409


>gb|ESW20003.1| hypothetical protein PHAVU_006G172900g [Phaseolus vulgaris]
          Length = 1193

 Score =  101 bits (251), Expect = 4e-19
 Identities = 53/93 (56%), Positives = 64/93 (68%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT++PKNGCGIPWNWSR+H RGKT LD AG+SLSCGLSDS  +K    G   +   H   
Sbjct: 319 VTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLKK----GAFAANGRH--I 372

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           S +P + E+S+S   SD EALPLL E  +SH S
Sbjct: 373 SEMPVASEHSSSYTKSDAEALPLLVEASVSHAS 405


>ref|XP_002305724.2| hypothetical protein POPTR_0004s06030g [Populus trichocarpa]
           gi|550340424|gb|EEE86235.2| hypothetical protein
           POPTR_0004s06030g [Populus trichocarpa]
          Length = 1089

 Score =  100 bits (250), Expect = 5e-19
 Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
 Frame = -2

Query: 336 HPRSDELG---VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLG 166
           H   +E G   VT++P+NGCGIPWNWSR+H RGKT LD AG+S SCGLSDS   + +G  
Sbjct: 207 HMEEEEYGDQNVTRAPRNGCGIPWNWSRIHHRGKTFLDMAGRSFSCGLSDS---RRDG-- 261

Query: 165 PHCSYSSHTDASVIPGSLENSASSVDSDMEALPLLNEPCLSHESLGKD*NNAGF 4
              ++S   D   +P + ++S SS  SD+EALPLL E   SHES     +NAG+
Sbjct: 262 ---TFSHGRDFPGMPVASDHSTSSTKSDVEALPLLVEASGSHEST----DNAGW 308


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 52/96 (54%), Positives = 64/96 (66%)
 Frame = -2

Query: 321 ELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSH 142
           E  VT++P+NGCGIPWNWSR+H RGKT LD AG+SLSCGLSDS  R+        S    
Sbjct: 316 ERNVTRAPRNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLRR------GGSVPQG 369

Query: 141 TDASVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
            D S +P + ++S++S  SD EALPLL E   S ES
Sbjct: 370 RDVSDMPMASDHSSASTKSDAEALPLLVEASGSQES 405


>gb|EOY27924.1| AAA-type ATPase family protein isoform 3 [Theobroma cacao]
          Length = 1221

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 55/107 (51%), Positives = 67/107 (62%)
 Frame = -2

Query: 324 DELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSS 145
           DE  VT++P+NGCGIPWNWSR+H RGKTILD AG+S SCGLSDS  RK   +      S 
Sbjct: 316 DERNVTRAPRNGCGIPWNWSRIHHRGKTILDIAGRSFSCGLSDSRLRKGGAV------SH 369

Query: 144 HTDASVIPGSLENSASSVDSDMEALPLLNEPCLSHESLGKD*NNAGF 4
             +   +P + + S+SS  SD EALPLL E   S  S      NAG+
Sbjct: 370 GRNVPEMPVAFDQSSSSAKSDAEALPLLIEASGSQYST----ENAGW 412


>gb|EOY27923.1| AAA-type ATPase family protein isoform 2 [Theobroma cacao]
          Length = 1219

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 55/107 (51%), Positives = 67/107 (62%)
 Frame = -2

Query: 324 DELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSS 145
           DE  VT++P+NGCGIPWNWSR+H RGKTILD AG+S SCGLSDS  RK   +      S 
Sbjct: 316 DERNVTRAPRNGCGIPWNWSRIHHRGKTILDIAGRSFSCGLSDSRLRKGGAV------SH 369

Query: 144 HTDASVIPGSLENSASSVDSDMEALPLLNEPCLSHESLGKD*NNAGF 4
             +   +P + + S+SS  SD EALPLL E   S  S      NAG+
Sbjct: 370 GRNVPEMPVAFDQSSSSAKSDAEALPLLIEASGSQYST----ENAGW 412


>gb|EOY27922.1| AAA-type ATPase family protein isoform 1 [Theobroma cacao]
          Length = 1216

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 55/107 (51%), Positives = 67/107 (62%)
 Frame = -2

Query: 324 DELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSS 145
           DE  VT++P+NGCGIPWNWSR+H RGKTILD AG+S SCGLSDS  RK   +      S 
Sbjct: 316 DERNVTRAPRNGCGIPWNWSRIHHRGKTILDIAGRSFSCGLSDSRLRKGGAV------SH 369

Query: 144 HTDASVIPGSLENSASSVDSDMEALPLLNEPCLSHESLGKD*NNAGF 4
             +   +P + + S+SS  SD EALPLL E   S  S      NAG+
Sbjct: 370 GRNVPEMPVAFDQSSSSAKSDAEALPLLIEASGSQYST----ENAGW 412


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355482867|gb|AES64070.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 1177

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 50/93 (53%), Positives = 65/93 (69%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT++PKNGCG+PWNWSR+H RGKT LD AG+SLSCGLSDS  +K   L      S+  + 
Sbjct: 324 VTRAPKNGCGMPWNWSRIHHRGKTFLDIAGRSLSCGLSDSRLKKGRSL-----TSNGRNI 378

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           SV+P + ++S S  +S+ EALPLL +   SH S
Sbjct: 379 SVMPVAADDSCSCTNSEAEALPLLVDASGSHGS 411


>ref|XP_006594536.1| PREDICTED: protein STICHEL-like 3-like [Glycine max]
          Length = 1187

 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 51/93 (54%), Positives = 62/93 (66%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT++PKNGCGIPWNWSR+H RGKT LD AG+SLSCGLSDS  +K          ++  + 
Sbjct: 315 VTRAPKNGCGIPWNWSRIHHRGKTFLDLAGRSLSCGLSDSRLKK------GTFTANGRNI 368

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           S +P + E S+S   SD EALPLL E   SH S
Sbjct: 369 SEMPVASERSSSCTKSDAEALPLLVEASGSHAS 401


>ref|XP_003547181.1| PREDICTED: protein STICHEL-like 3-like [Glycine max]
          Length = 1191

 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 51/93 (54%), Positives = 62/93 (66%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT++PKNGCGIPWNWSR+H RGKT LD AG+SLSCGLSDS  +K          ++  + 
Sbjct: 319 VTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLKK------GTFAANGRNI 372

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           S +P + E S+S   SD EALPLL E   SH S
Sbjct: 373 SEMPVASERSSSCTRSDAEALPLLVEASGSHAS 405


>gb|EXC10952.1| DNA polymerase III subunit [Morus notabilis]
          Length = 1172

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = -2

Query: 324 DELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSS 145
           DE  VT++P NGCGIPWNWSR+H RGKT LD AG+S SCGLSDS  +K    GP    S 
Sbjct: 337 DEQNVTRAPGNGCGIPWNWSRIHHRGKTFLDMAGRSFSCGLSDSRLKKG---GP----SG 389

Query: 144 H-TDASVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           H  D + +P +  NS+SS  S+ EALPLL +   S ES
Sbjct: 390 HGRDIAEMPVASANSSSSSKSNAEALPLLVDASGSQES 427


>gb|EXC68992.1| DNA polymerase III subunit [Morus notabilis]
          Length = 482

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = -2

Query: 324 DELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSS 145
           DE  VT++P NGCGIPWNWSR+H RGKT LD AG+S SCGLSDS  +K    GP    S 
Sbjct: 105 DEQNVTRAPGNGCGIPWNWSRIHHRGKTFLDMAGRSFSCGLSDSRLKKG---GP----SG 157

Query: 144 H-TDASVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           H  D + +P +  NS+SS  S+ EALPLL +   S ES
Sbjct: 158 HGRDIAEMPVASVNSSSSSKSNAEALPLLVDASGSQES 195


>ref|XP_006358095.1| PREDICTED: protein STICHEL-like 3-like [Solanum tuberosum]
          Length = 1213

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 51/93 (54%), Positives = 64/93 (68%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT+ P+NGCGIPWNWSR+H RGK+ LD AGKSLSCGLSD  +++  G GP     +  DA
Sbjct: 316 VTRDPRNGCGIPWNWSRIHHRGKSFLDMAGKSLSCGLSDPRSKRSGG-GP-----TGRDA 369

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           + +P   E S+SS  S+ EALPLL +P  S  S
Sbjct: 370 ADMPIMSEYSSSSSKSEAEALPLLFDPSNSQGS 402


>ref|XP_004485931.1| PREDICTED: uncharacterized protein LOC101514289 [Cicer arietinum]
          Length = 1167

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 49/93 (52%), Positives = 64/93 (68%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT++PKNGCG+PWNWSR+H RGKT LD AG+SLSCGLSDS  +K          ++  + 
Sbjct: 316 VTRAPKNGCGMPWNWSRIHHRGKTFLDIAGRSLSCGLSDSKLKK------GTFTANGRNL 369

Query: 132 SVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           S +P + +NS+S  +SD EALPLL +   SH S
Sbjct: 370 SEMPVAADNSSSCTNSDAEALPLLVDASGSHGS 402


>ref|XP_002317391.1| hypothetical protein POPTR_0011s06860g [Populus trichocarpa]
           gi|222860456|gb|EEE98003.1| hypothetical protein
           POPTR_0011s06860g [Populus trichocarpa]
          Length = 1190

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 59/115 (51%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
 Frame = -2

Query: 336 HPRSDELG---VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLG 166
           H   +E G   VT++P+NGCGIPWNWS +H RGKTILD AG+SLSCGLSD+  RK     
Sbjct: 306 HMEEEEYGDQNVTRAPRNGCGIPWNWSGIHHRGKTILDIAGRSLSCGLSDT--RK----- 358

Query: 165 PHCSYSSH-TDASVIPGSLENSASSVDSDMEALPLLNEPCLSHESLGKD*NNAGF 4
              S +SH  D   +P + + S+SS  SD+EALPLL E   S ES     +NAG+
Sbjct: 359 --GSTASHGRDFPGMPVASDRSSSSTKSDVEALPLLVEASGSQEST----DNAGW 407


>gb|EMJ15765.1| hypothetical protein PRUPE_ppa000454mg [Prunus persica]
          Length = 1165

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 56/116 (48%), Positives = 72/116 (62%), Gaps = 9/116 (7%)
 Frame = -2

Query: 354 LSGSGMHPR------SDELG---VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGL 202
           L+    HP+       DE G   VT++P+NGCGIPWNWSR+H RGKT LD AG+S SCGL
Sbjct: 297 LAQGSAHPKYHMERGEDEYGEQNVTRAPRNGCGIPWNWSRIHHRGKTFLDIAGRSFSCGL 356

Query: 201 SDSAARKMEGLGPHCSYSSHTDASVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
           SDS  +K +G+  H       + S +P + +NS++S  S  EALPLL E   S ES
Sbjct: 357 SDSRFKK-DGMAAHA-----RNISDMPVASDNSSTSTKS--EALPLLVEASGSQES 404


>ref|XP_004293975.1| PREDICTED: uncharacterized protein LOC101304549 [Fragaria vesca
           subsp. vesca]
          Length = 1132

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 50/97 (51%), Positives = 64/97 (65%)
 Frame = -2

Query: 324 DELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSS 145
           +E  VT++P NGCGIPWNWSR+H RGK+ LD AG+S SCG+SDS  +K + L  H     
Sbjct: 318 EEQNVTRAPGNGCGIPWNWSRIHHRGKSFLDIAGRSFSCGMSDSRFKKGD-LAAH----- 371

Query: 144 HTDASVIPGSLENSASSVDSDMEALPLLNEPCLSHES 34
             D S +P + +NS+SS   D EALPLL +   S ES
Sbjct: 372 GRDISDMPMASDNSSSSTKYDAEALPLLVDASGSQES 408


>ref|XP_004233028.1| PREDICTED: uncharacterized protein LOC101268831 [Solanum
           lycopersicum]
          Length = 1104

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = -2

Query: 312 VTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSLSCGLSDSAARKMEGLGPHCSYSSHTDA 133
           VT+ P+NGCGIPWNWSR+H RGK+ LD AGKSLSCGLSD  +++  G GP        DA
Sbjct: 316 VTRDPRNGCGIPWNWSRIHHRGKSFLDMAGKSLSCGLSDPRSKRSGG-GPRGG-----DA 369

Query: 132 SVIPGSLENSASSVDSDMEALPLL 61
           + +P   E S+SS  S+ EALPLL
Sbjct: 370 ADMPIMSEYSSSSSKSEAEALPLL 393


>ref|XP_006467605.1| PREDICTED: protein STICHEL-like 3-like [Citrus sinensis]
          Length = 1199

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = -2

Query: 321 ELGVTQSPKNGCGIPWNWSRMHQRGKTILDRAGKSL-SCGLSDSAARKMEGLGPHCSYSS 145
           E  VT++P+NGCGIPWNWSR+H RGKT LD AG+SL SCGLSDS  RK  G       +S
Sbjct: 316 ERNVTRAPRNGCGIPWNWSRIHHRGKTFLDMAGRSLTSCGLSDSRIRKAGG-------AS 368

Query: 144 HT-DASVIPGSLENSASSVDSDMEALPLLNE 55
           H+ +   +P   + S+SS +S  EALPLL E
Sbjct: 369 HSRNVPDMPLVSDRSSSSTNSGAEALPLLVE 399