BLASTX nr result
ID: Ephedra28_contig00027202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00027202
(615 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 155 6e-36
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ... 153 4e-35
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 151 1e-34
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 151 1e-34
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 151 1e-34
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 150 4e-34
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ... 147 2e-33
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A... 145 9e-33
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304... 145 1e-32
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 144 2e-32
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ... 143 3e-32
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ... 143 3e-32
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ... 143 3e-32
ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair ... 143 3e-32
gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus pe... 143 4e-32
ref|NP_199623.2| ARM repeat superfamily protein [Arabidopsis tha... 140 4e-31
gb|EOY26936.1| MMS19 nucleotide excision repair protein, putativ... 139 6e-31
gb|EOY26935.1| MMS19 nucleotide excision repair protein, putativ... 139 6e-31
gb|EOY26934.1| MMS19 nucleotide excision repair protein, putativ... 139 6e-31
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ... 139 6e-31
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 155 bits (393), Expect = 6e-36
Identities = 83/173 (47%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Frame = -3
Query: 520 KMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGD-LTVQSIVKDMEMYLTTTDNAIR 344
+++ L I++YV+ +S+ +Q I ++LL+ D LT++++V +M MYLTTTDN IR
Sbjct: 3 QLSQLTQYIESYVDSSRSSTQQAASVDAI-AYLLKNDILTLETLVTEMGMYLTTTDNIIR 61
Query: 343 ARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGK 164
RGILLLAE+L+ SKPL++ I SL +FFT RLADW +L GALIGCLAL+KR++ MG+
Sbjct: 62 TRGILLLAELLTRLASKPLDNVTIHSLISFFTDRLADWRALRGALIGCLALMKRKSNMGR 121
Query: 163 VTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
VT D +A++Y+EN+ VQ+L Q+DR LD Y ++V SL +DL+
Sbjct: 122 VTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILECLLDHYPESVASLGDDLV 174
>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
[Solanum lycopersicum]
Length = 1153
Score = 153 bits (386), Expect = 4e-35
Identities = 82/186 (44%), Positives = 118/186 (63%)
Frame = -3
Query: 562 VLSVFQNFSRATIRKMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKD 383
+LS + ++ + + L +I++YV+ S A+Q I L L+++++V++
Sbjct: 4 LLSNTKFYTNRVLSQPTELVRIIESYVSSSSSEAQQAASIDAIALLLKNDLLSLETLVRE 63
Query: 382 MEMYLTTTDNAIRARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIG 203
MEMYLTTTDN IR+RGILLL E+L SKPL TAI SL FFT RLADW +LHGAL+G
Sbjct: 64 MEMYLTTTDNIIRSRGILLLGELLMRLMSKPLGDTAISSLMEFFTERLADWKALHGALVG 123
Query: 202 CLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLS 23
CLALL+R+T +G ++ +A SY++ + VQ+L Q+DR LD Y DA+ S
Sbjct: 124 CLALLRRKTGVGMISRSQAKAVAESYLKTLQVQSLGQHDRKLCLQILECLLDRYRDALFS 183
Query: 22 LEEDLI 5
L +DL+
Sbjct: 184 LGDDLV 189
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 151 bits (382), Expect = 1e-34
Identities = 78/164 (47%), Positives = 109/164 (66%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I+++VN S Q I S L + LT++++V++M MYLTTTD+ IRARGILLL E
Sbjct: 11 IESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVIRARGILLLGE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+L+ SKPL+ I S+ FFT RLADW +L GAL+GCLALL+R++ G +T+ D +
Sbjct: 71 LLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGGVITTNDAKAV 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+SY++N+ VQ+L Q+DR L Y DAV+SL EDL+
Sbjct: 131 AQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGEDLL 174
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 151 bits (382), Expect = 1e-34
Identities = 78/164 (47%), Positives = 109/164 (66%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I+++VN S Q I S L + LT++++V++M MYLTTTD+ IRARGILLL E
Sbjct: 11 IESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVIRARGILLLGE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+L+ SKPL+ I S+ FFT RLADW +L GAL+GCLALL+R++ G +T+ D +
Sbjct: 71 LLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGGVITTNDAKAV 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+SY++N+ VQ+L Q+DR L Y DAV+SL EDL+
Sbjct: 131 AQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGEDLL 174
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 151 bits (382), Expect = 1e-34
Identities = 78/164 (47%), Positives = 109/164 (66%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I+++VN S Q I S L + LT++++V++M MYLTTTD+ IRARGILLL E
Sbjct: 11 IESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVIRARGILLLGE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+L+ SKPL+ I S+ FFT RLADW +L GAL+GCLALL+R++ G +T+ D +
Sbjct: 71 LLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGGVITTNDAKAV 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+SY++N+ VQ+L Q+DR L Y DAV+SL EDL+
Sbjct: 131 AQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGEDLL 174
>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
[Cucumis sativus]
Length = 1147
Score = 150 bits (378), Expect = 4e-34
Identities = 74/172 (43%), Positives = 114/172 (66%)
Frame = -3
Query: 520 KMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRA 341
++ L ++++V+ ++ ++Q + I S + LT++++V++M MYLT TDN IR
Sbjct: 3 ELCKLTHYVESFVDVSRTPSQQATSLETITSLVKNNVLTIETLVREMGMYLTITDNIIRG 62
Query: 340 RGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKV 161
RGILLL E+L+ SKPL+S I SL FFT RLADW +L GAL+GCLAL++R+T +G +
Sbjct: 63 RGILLLGELLACLASKPLDSATIHSLIAFFTERLADWKALRGALVGCLALMRRKTNVGSI 122
Query: 160 TSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
+ D +A+SY +N+ VQ+L Q+DR L+ Y DAV+SL +DL+
Sbjct: 123 SQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLV 174
>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
[Solanum tuberosum]
Length = 1170
Score = 147 bits (372), Expect = 2e-33
Identities = 79/164 (48%), Positives = 105/164 (64%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I++YV+ S A+Q I L L+++++V++MEMYLTTTDN IR+RGILLL E
Sbjct: 13 IESYVSSSSSEAQQAASVDAIAVLLKNDLLSLETLVREMEMYLTTTDNIIRSRGILLLGE 72
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+L SKPL TAI SL FFT RLADW +LHGAL+GCLALL+R+T G + +
Sbjct: 73 LLMRLMSKPLGDTAISSLIEFFTERLADWKALHGALVGCLALLRRKTGTGMINRSQAKAV 132
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A SY++ + VQ+L Q DR LD Y DA+ SL +DL+
Sbjct: 133 AESYLKTLQVQSLGQQDRKLCLQILECLLDRYRDALFSLGDDLV 176
>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
gi|548857353|gb|ERN15159.1| hypothetical protein
AMTR_s00056p00136660 [Amborella trichopoda]
Length = 1160
Score = 145 bits (366), Expect = 9e-33
Identities = 74/174 (42%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
Frame = -3
Query: 517 MASLAALI---DAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAI 347
MAS A+ I + +V+P +S +QD I + + + LT++++V++ME+YLTTTD ++
Sbjct: 1 MASTASWIPHVEVFVDPSRSKDQQDASLNVIATLMKKDTLTLEALVQEMEVYLTTTDASV 60
Query: 346 RARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMG 167
R+RGILL+AE+LS+ SKP++ I SL FFTSRLADW +L GA IGCLALL+R++ G
Sbjct: 61 RSRGILLVAELLSYLASKPIDGAIIHSLTEFFTSRLADWQALRGAFIGCLALLRRKSHTG 120
Query: 166 KVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
++ D+ L +S++ NI VQAL +DR+ LD + + L+++L+
Sbjct: 121 TISDNDLINLTKSFLLNIQVQALALHDRLLCLELLECLLDQFPSVISVLDDELV 174
>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
subsp. vesca]
Length = 1149
Score = 145 bits (365), Expect = 1e-32
Identities = 80/163 (49%), Positives = 104/163 (63%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
++ YV+ + AEQ I S + + LT++ +VK+M MYLT TDN IRARGILLLAE
Sbjct: 11 LECYVDTARPPAEQAASLNFITSLVKKDLLTIEVLVKEMRMYLTITDNVIRARGILLLAE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+L+ SKPL++ I SL FFT RL+DW +L GALIGCLALL+R+ G V++ D +
Sbjct: 71 VLTGLSSKPLDNATIHSLIGFFTDRLSDWRALRGALIGCLALLRRQVNAGMVSASDAKVV 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDL 8
A+SY ENI VQ+L Q DR L Y + V SL EDL
Sbjct: 131 AQSYRENIPVQSLAQQDRKLCFELLECLLQRYPNEVASLGEDL 173
>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
communis] gi|223544868|gb|EEF46383.1| DNA
repair/transcription protein met18/mms19, putative
[Ricinus communis]
Length = 1174
Score = 144 bits (363), Expect = 2e-32
Identities = 82/168 (48%), Positives = 107/168 (63%)
Frame = -3
Query: 508 LAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGIL 329
L I++YV+ +S ++Q I L +T+ S+VK+MEMYLTTTD+ IRARGIL
Sbjct: 7 LTQYIESYVDASRSLSQQAASLDAIVLLLKNDAVTIGSLVKEMEMYLTTTDDIIRARGIL 66
Query: 328 LLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSED 149
LL E LS SKPL++T I SL FFT RLADW +L GAL+GCLAL++RR+ G +T D
Sbjct: 67 LLGEALSHLSSKPLDNTTIHSLIAFFTERLADWRALRGALVGCLALIRRRSN-GIITGID 125
Query: 148 VTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
+A SY++N+ VQ+L Q DR L+ AV SL EDLI
Sbjct: 126 AKVVAESYLQNLQVQSLAQYDRKLCFELLECLLENCPAAVASLGEDLI 173
>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X4 [Glycine max]
Length = 1095
Score = 143 bits (361), Expect = 3e-32
Identities = 74/164 (45%), Positives = 110/164 (67%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I++YV+ + A+Q + S + L ++++V+++EMYLTTTDN +RARGILLLAE
Sbjct: 11 IESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVVRARGILLLAE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+++ +SKPL S I SL FF RLADW ++ GAL+GCLAL++R++ +G VT D T +
Sbjct: 71 VMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVGMVTDSDATTI 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+S+++ + VQ+L Q DR L+ Y DAV +L EDLI
Sbjct: 131 AQSFLQYMQVQSLGQYDRKLCFELLDCLLERYFDAVTTLGEDLI 174
>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Glycine max]
Length = 1102
Score = 143 bits (361), Expect = 3e-32
Identities = 74/164 (45%), Positives = 110/164 (67%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I++YV+ + A+Q + S + L ++++V+++EMYLTTTDN +RARGILLLAE
Sbjct: 11 IESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVVRARGILLLAE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+++ +SKPL S I SL FF RLADW ++ GAL+GCLAL++R++ +G VT D T +
Sbjct: 71 VMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVGMVTDSDATTI 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+S+++ + VQ+L Q DR L+ Y DAV +L EDLI
Sbjct: 131 AQSFLQYMQVQSLGQYDRKLCFELLDCLLERYFDAVTTLGEDLI 174
>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Glycine max]
Length = 1133
Score = 143 bits (361), Expect = 3e-32
Identities = 74/164 (45%), Positives = 110/164 (67%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I++YV+ + A+Q + S + L ++++V+++EMYLTTTDN +RARGILLLAE
Sbjct: 11 IESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVVRARGILLLAE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+++ +SKPL S I SL FF RLADW ++ GAL+GCLAL++R++ +G VT D T +
Sbjct: 71 VMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVGMVTDSDATTI 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+S+++ + VQ+L Q DR L+ Y DAV +L EDLI
Sbjct: 131 AQSFLQYMQVQSLGQYDRKLCFELLDCLLERYFDAVTTLGEDLI 174
>ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Glycine max]
Length = 1135
Score = 143 bits (361), Expect = 3e-32
Identities = 74/164 (45%), Positives = 110/164 (67%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I++YV+ + A+Q + S + L ++++V+++EMYLTTTDN +RARGILLLAE
Sbjct: 11 IESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVVRARGILLLAE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+++ +SKPL S I SL FF RLADW ++ GAL+GCLAL++R++ +G VT D T +
Sbjct: 71 VMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVGMVTDSDATTI 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+S+++ + VQ+L Q DR L+ Y DAV +L EDLI
Sbjct: 131 AQSFLQYMQVQSLGQYDRKLCFELLDCLLERYFDAVTTLGEDLI 174
>gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
Length = 1158
Score = 143 bits (360), Expect = 4e-32
Identities = 76/161 (47%), Positives = 105/161 (65%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
I+ YV+ +S EQ I S + LT++ +VK+M MYLTTTDN IRARGILLLAE
Sbjct: 11 IELYVDTSRSPTEQAASLNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVIRARGILLLAE 70
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
+L+ SKPL++ I SL FFT RLADW +L GAL+GCLALL+R+ G V++ D +
Sbjct: 71 VLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAGMVSASDGKLV 130
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEE 14
A+SY+E++ VQ+L Q+DR L+ + + + SL E
Sbjct: 131 AQSYIESLQVQSLGQHDRKLCFELLECLLERHPNEIASLGE 171
>ref|NP_199623.2| ARM repeat superfamily protein [Arabidopsis thaliana]
gi|110741897|dbj|BAE98890.1| hypothetical protein
[Arabidopsis thaliana] gi|332008238|gb|AED95621.1| ARM
repeat superfamily protein [Arabidopsis thaliana]
Length = 1134
Score = 140 bits (352), Expect = 4e-31
Identities = 71/164 (43%), Positives = 111/164 (67%)
Frame = -3
Query: 496 IDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNAIRARGILLLAE 317
++ +V+ ++S+++QD K I S L L++ +V++MEMYLTTTDN +RARGILLLAE
Sbjct: 12 LETFVDTNRSSSQQDDSLKAIASSLENDSLSITQLVREMEMYLTTTDNLVRARGILLLAE 71
Query: 316 ILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKL 137
IL ++KPL T + +L FF+ +LADW ++ GAL+GCLALLKR+ G VT DV +
Sbjct: 72 ILDCLKAKPLNDTIVHTLVGFFSEKLADWRAMCGALVGCLALLKRKDVAGVVTDIDVQAM 131
Query: 136 ARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
A+S ++N+ VQAL ++R L +++A+L++ + L+
Sbjct: 132 AKSMIQNVQVQALALHERKLAFELLECLLQQHSEAILTMGDLLV 175
>gb|EOY26936.1| MMS19 nucleotide excision repair protein, putative isoform 5
[Theobroma cacao]
Length = 1157
Score = 139 bits (350), Expect = 6e-31
Identities = 77/175 (44%), Positives = 109/175 (62%)
Frame = -3
Query: 529 TIRKMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNA 350
T + + + + +D+ +P + AA DV I S L LT++++V++ME YLTT DN
Sbjct: 4 TSQLIQGIESFVDSTRSPTQQAASLDV----IASLLKNNQLTIETLVREMEGYLTTADNI 59
Query: 349 IRARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEM 170
IRARGILLL E+L SKPL+ I SL FFT RLADW +L GAL+GCLALL+R++
Sbjct: 60 IRARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSG 119
Query: 169 GKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
G V+ D +A SY++N+ VQ+L + DR L+ Y A+ SL ++LI
Sbjct: 120 GIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLI 174
>gb|EOY26935.1| MMS19 nucleotide excision repair protein, putative isoform 4
[Theobroma cacao]
Length = 1136
Score = 139 bits (350), Expect = 6e-31
Identities = 77/175 (44%), Positives = 109/175 (62%)
Frame = -3
Query: 529 TIRKMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNA 350
T + + + + +D+ +P + AA DV I S L LT++++V++ME YLTT DN
Sbjct: 4 TSQLIQGIESFVDSTRSPTQQAASLDV----IASLLKNNQLTIETLVREMEGYLTTADNI 59
Query: 349 IRARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEM 170
IRARGILLL E+L SKPL+ I SL FFT RLADW +L GAL+GCLALL+R++
Sbjct: 60 IRARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSG 119
Query: 169 GKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
G V+ D +A SY++N+ VQ+L + DR L+ Y A+ SL ++LI
Sbjct: 120 GIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLI 174
>gb|EOY26934.1| MMS19 nucleotide excision repair protein, putative isoform 3
[Theobroma cacao]
Length = 1062
Score = 139 bits (350), Expect = 6e-31
Identities = 77/175 (44%), Positives = 109/175 (62%)
Frame = -3
Query: 529 TIRKMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNA 350
T + + + + +D+ +P + AA DV I S L LT++++V++ME YLTT DN
Sbjct: 4 TSQLIQGIESFVDSTRSPTQQAASLDV----IASLLKNNQLTIETLVREMEGYLTTADNI 59
Query: 349 IRARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEM 170
IRARGILLL E+L SKPL+ I SL FFT RLADW +L GAL+GCLALL+R++
Sbjct: 60 IRARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSG 119
Query: 169 GKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
G V+ D +A SY++N+ VQ+L + DR L+ Y A+ SL ++LI
Sbjct: 120 GIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLI 174
>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 139 bits (350), Expect = 6e-31
Identities = 77/175 (44%), Positives = 109/175 (62%)
Frame = -3
Query: 529 TIRKMASLAALIDAYVNPDKSAAEQDVCRKHIFSFLLEGDLTVQSIVKDMEMYLTTTDNA 350
T + + + + +D+ +P + AA DV I S L LT++++V++ME YLTT DN
Sbjct: 4 TSQLIQGIESFVDSTRSPTQQAASLDV----IASLLKNNQLTIETLVREMEGYLTTADNI 59
Query: 349 IRARGILLLAEILSFFQSKPLESTAIKSLATFFTSRLADWPSLHGALIGCLALLKRRTEM 170
IRARGILLL E+L SKPL+ I SL FFT RLADW +L GAL+GCLALL+R++
Sbjct: 60 IRARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSG 119
Query: 169 GKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXXXXLDCYTDAVLSLEEDLI 5
G V+ D +A SY++N+ VQ+L + DR L+ Y A+ SL ++LI
Sbjct: 120 GIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLI 174