BLASTX nr result

ID: Ephedra28_contig00027149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027149
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77667.1| unknown [Picea sitchensis]                              99   1e-18
gb|EMJ19294.1| hypothetical protein PRUPE_ppa006592mg [Prunus pe...    56   6e-06

>gb|ADE77667.1| unknown [Picea sitchensis]
          Length = 455

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 60/143 (41%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
 Frame = +3

Query: 141 LWQGSVLKQHLKGALENLELLKAITNELDVISRKKQT--------HCNRLDGLEAQKSEA 296
           LWQG+ L+QHL   LEN+ELLKA+TNEL+ I+  K          +    + +    S  
Sbjct: 31  LWQGTQLQQHLMSLLENIELLKALTNELNAIALVKGLGEVVRPTYNSENPESVSGSASVL 90

Query: 297 DTVLDLDEQKVSEYPGRDLTSVGQDLSYLIEHKDINLLTHEYTTLEAGRAVQEIIKGLLA 476
           D V   D +K+SE  G D  SV Q L  LI  K+I+L TH    LEAG+AVQ  ++ LLA
Sbjct: 91  DGVFP-DNRKISENLGEDQKSVLQGLVELIGTKNIDLSTHHCMALEAGKAVQLSLQNLLA 149

Query: 477 PLDAVVNQTCPWEESSAAVKVAN 545
           P D +++QT  WEE +  V++ +
Sbjct: 150 PFDVLMHQTGRWEERATMVRITD 172


>gb|EMJ19294.1| hypothetical protein PRUPE_ppa006592mg [Prunus persica]
          Length = 404

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 39/134 (29%), Positives = 65/134 (48%)
 Frame = +3

Query: 144 WQGSVLKQHLKGALENLELLKAITNELDVISRKKQTHCNRLDGLEAQKSEADTVLDLDEQ 323
           W+ S +++ LK   + L L KA+  EL+++   K       DG  A+        D D  
Sbjct: 30  WESSNVRERLKNLQDTLRLAKAMQKELEMVRLIK-------DGKRAE--------DDDGA 74

Query: 324 KVSEYPGRDLTSVGQDLSYLIEHKDINLLTHEYTTLEAGRAVQEIIKGLLAPLDAVVNQT 503
            VSE+            S  ++ + INL +    ++EA  A+   +   LAP  A+ ++ 
Sbjct: 75  SVSEF------------SEFLKERRINLESQVSLSVEAANALMAKLGVELAPFRAITHEM 122

Query: 504 CPWEESSAAVKVAN 545
           CPWEE SAA++++N
Sbjct: 123 CPWEEKSAALRLSN 136


Top