BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027146
         (732 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76509.1| unknown [Picea sitchensis]                             303   3e-80
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...   290   3e-76
ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containi...   286   4e-75
ref|XP_002302000.2| pentatricopeptide repeat-containing family p...   286   6e-75
gb|EMJ17597.1| hypothetical protein PRUPE_ppa022530mg [Prunus pe...   286   6e-75
gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus pe...   283   4e-74
ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citr...   282   7e-74
gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygr...   282   9e-74
ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containi...   279   8e-73
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   278   2e-72
ref|XP_001775099.1| predicted protein [Physcomitrella patens] gi...   278   2e-72
ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containi...   277   3e-72
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...   276   4e-72
ref|XP_001774871.1| predicted protein [Physcomitrella patens] gi...   276   5e-72
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   276   6e-72
ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containi...   275   8e-72
gb|ABK26521.1| unknown [Picea sitchensis]                             275   1e-71
emb|CBI28351.3| unnamed protein product [Vitis vinifera]              274   2e-71
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71
ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71

>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score =  303 bits (777), Expect = 3e-80
 Identities = 132/231 (57%), Positives = 178/231 (77%)
 Frame = +3

Query: 3   CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
           CMIDLL RAGRL EA + + T+PF PD  +W  LLG CR YG++DLG+ AAE LF+  P 
Sbjct: 16  CMIDLLGRAGRLDEARDFMKTIPFAPDANVWGALLGACRMYGNIDLGKHAAECLFQLEPH 75

Query: 183 DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
           ++A YV+L NIYA AG WDD AK++K+M+DRG +K    SW++ K+  ++F+ +D+SHPQ
Sbjct: 76  NAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQ 135

Query: 363 AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            E+IYS L+ L  Q+   GYVPDT + LHD E E KE+S+ HHSE++A+A+G ++T  G+
Sbjct: 136 TEEIYSTLEELARQMEAAGYVPDTNFVLHDVEMEQKEHSLYHHSEKLAIAFGLISTLPGL 195

Query: 543 PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
           P+R++KNLR CGDCH+A KF+SK+V R+I+IRDANRFHHF+ G CSCGDYW
Sbjct: 196 PVRIIKNLRVCGDCHTATKFISKIVEREIIIRDANRFHHFKDGLCSCGDYW 246


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  290 bits (743), Expect = 3e-76
 Identities = 128/231 (55%), Positives = 175/231 (75%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CM+D+L+RAG L EAE+++ TMPF+P   MW  LL  CR +G+V++G +AAE   K  PQ
Sbjct: 590  CMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQ 649

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            ++  YV L  IYA AGMW D AK++KLM++RG KK    SW++     +SFV+ D+SHP+
Sbjct: 650  NAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPR 709

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
             E+IYS L+ L +QI+  GYVPDTR+ +HD ++E KE +VCHHSE++A+AYG ++TP   
Sbjct: 710  TEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPET 769

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PIRV KNLR C DCH+A KF+SK+ GR+I+ RDA+RFHHF++G+CSCGDYW
Sbjct: 770  PIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820


>ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            isoform X1 [Citrus sinensis]
            gi|568839239|ref|XP_006473596.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At1g25360-like isoform X2 [Citrus sinensis]
          Length = 799

 Score =  286 bits (733), Expect = 4e-75
 Identities = 127/229 (55%), Positives = 171/229 (74%)
 Frame = +3

Query: 9    IDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQDS 188
            IDLL RAG+  EA++++D++PF+P   +W  LL GCR +G++DLG  AAE LF+  PQ +
Sbjct: 571  IDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIHAAEQLFQLMPQHA 630

Query: 189  APYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQAE 368
              YV+L N+YA  G WDDAA+++KLMRDRG KK    SW++  +  + F+ DD +HP+A+
Sbjct: 631  GTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQ 690

Query: 369  KIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMPI 548
             +Y  L+ L  ++RK GYVPDT++ LHD E + KEY++  HSE++AVA+G M  P G  +
Sbjct: 691  AVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPHGATV 750

Query: 549  RVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            RV+KNLR CGDCH+A KFMSKVVGR+IV+RD  RFHHFR GKCSCGDYW
Sbjct: 751  RVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 799


>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550344162|gb|EEE81273.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 797

 Score =  286 bits (731), Expect = 6e-75
 Identities = 128/230 (55%), Positives = 170/230 (73%)
 Frame = +3

Query: 6    MIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQD 185
            +IDLL RAG+  EA+ ++++MPF+P   +W  LL GCR +G++DLG +AAE LF+  PQ 
Sbjct: 568  IIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQH 627

Query: 186  SAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQA 365
               YV+L N+YA AG W+D AK++KLMRDRG KK    SW++ ++  +SF+  D +HP+ 
Sbjct: 628  DGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEV 687

Query: 366  EKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMP 545
             +IY+ L+ L  ++RK GYVPDT+Y LHD E + KE+ +  HSE++AVAYG M  P G  
Sbjct: 688  RQIYNYLEQLVLEMRKIGYVPDTKYVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGAT 747

Query: 546  IRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            +RV KNLR CGDCH+A KFMSKVVGR+IV+RD  RFHHFR GKCSCGDYW
Sbjct: 748  VRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797


>gb|EMJ17597.1| hypothetical protein PRUPE_ppa022530mg [Prunus persica]
          Length = 689

 Score =  286 bits (731), Expect = 6e-75
 Identities = 128/230 (55%), Positives = 170/230 (73%)
 Frame = +3

Query: 6    MIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQD 185
            MIDLL R G   EA+ L+++MPF+P   +W  LL GCRT+G++DLG +AAE LF+  PQ 
Sbjct: 460  MIDLLCRCGEFTEAKGLIESMPFEPGGPIWEALLAGCRTHGNMDLGIQAAERLFELVPQH 519

Query: 186  SAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQA 365
               Y++L N+YA  G WDD AK++KLMRDRG KK    SW+D ++  + F+  D  HP+ 
Sbjct: 520  DGTYILLSNLYAAIGRWDDVAKVRKLMRDRGVKKEPGCSWIDVENMVHVFLVGDTEHPEV 579

Query: 366  EKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMP 545
            + +Y  L+ L  ++RK GY+PDT++ LHD E E KEYS+  HSE++AVA+G M  P G  
Sbjct: 580  QAVYKYLEQLGLEMRKLGYLPDTKFVLHDMESEHKEYSLSTHSEKLAVAFGLMKLPLGAT 639

Query: 546  IRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            IRV KNLR+CGDCH+AIKFMS+VVGRDI++RDA RFHHFR+G+CSCG+YW
Sbjct: 640  IRVFKNLRSCGDCHTAIKFMSRVVGRDIIVRDAKRFHHFRNGECSCGNYW 689


>gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus persica]
          Length = 689

 Score =  283 bits (724), Expect = 4e-74
 Identities = 127/230 (55%), Positives = 169/230 (73%)
 Frame = +3

Query: 6    MIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQD 185
            MIDLL R G   EA+ L+++MPF+P   +W  LL GCRT+G++DLG +AAE LF+  PQ 
Sbjct: 460  MIDLLCRCGEFTEAKGLIESMPFEPGAPIWEALLAGCRTHGNMDLGIQAAERLFELVPQH 519

Query: 186  SAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQA 365
               Y++L N+YA  G WDD AK+++LMRDRG KK    SW+D ++  + F+  D  HP+ 
Sbjct: 520  DGTYILLSNLYAAIGRWDDVAKVRQLMRDRGVKKEPGCSWIDVENMVHVFLVGDTVHPEV 579

Query: 366  EKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMP 545
            + +Y  L+ L  ++RK GY+PDT++ LHD E E KEYS+  HSE++AVA+G M  P G  
Sbjct: 580  QAVYKYLEQLGLEMRKLGYLPDTKFVLHDMESEHKEYSLSTHSEKLAVAFGLMKLPLGAT 639

Query: 546  IRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            IRV KNLR CGDCH+AIKFMS+VVGRDI++RDA RFHHFR+G+CSCG+YW
Sbjct: 640  IRVFKNLRICGDCHTAIKFMSRVVGRDIIVRDAKRFHHFRNGECSCGNYW 689


>ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citrus clementina]
            gi|557537225|gb|ESR48343.1| hypothetical protein
            CICLE_v10000322mg [Citrus clementina]
          Length = 799

 Score =  282 bits (722), Expect = 7e-74
 Identities = 125/229 (54%), Positives = 170/229 (74%)
 Frame = +3

Query: 9    IDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQDS 188
            IDLL RAG+  EA++++D++PF+P   +W  LL GCR +G++DLG +AAE LF+  P  +
Sbjct: 571  IDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLSGCRIHGNIDLGIQAAEQLFQLMPHHA 630

Query: 189  APYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQAE 368
              YV+L N+YA  G WDDAA+++K MRDRG KK    SW++  +  + F+ DD +HP+A+
Sbjct: 631  GTYVLLSNMYANLGRWDDAARVRKSMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQ 690

Query: 369  KIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMPI 548
             +Y  L+ L  ++RK GYVPDT++ LHD E + KEY++  HSE++AVA+G M  P G  +
Sbjct: 691  AVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATV 750

Query: 549  RVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            RV+KNLR CGDCH+A KFMSKVVGR+IV+RD  RFHHFR GKCSCGDYW
Sbjct: 751  RVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 799


>gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  282 bits (721), Expect = 9e-74
 Identities = 127/231 (54%), Positives = 169/231 (73%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CM+DLL RAG+L E E L+ TMPFQ + ++W  LLG CR +G+V +  +AAE+  K +P 
Sbjct: 790  CMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPD 849

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            ++A YV L ++YA AGMWD AAK++KLM  RG  K    SW++  D  + FV++DRSHP+
Sbjct: 850  NAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPE 909

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            +EKIY+ L  L   ++ EGYVPDTR  +HD +E  KE +VCHHSER+A+AYG ++T  G 
Sbjct: 910  SEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGT 969

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PIR+ KNLR C DCH+A KF++K+V R+IV RD NRFHHF+ G CSCGDYW
Sbjct: 970  PIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020


>ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Solanum tuberosum]
          Length = 804

 Score =  279 bits (713), Expect = 8e-73
 Identities = 126/230 (54%), Positives = 169/230 (73%)
 Frame = +3

Query: 6    MIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQD 185
            +IDLLSRAGRL EA+ ++  MP++P   +W  LL GCRT+ +VDLG +AAE LF+  PQ 
Sbjct: 575  LIDLLSRAGRLLEAKEVIQNMPYKPGAPIWEALLAGCRTHRNVDLGVEAAEQLFELTPQH 634

Query: 186  SAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQA 365
               Y++L N +A AG WDDAAK++KLMRD+G KK    SW+  ++T + F+  D +HP+ 
Sbjct: 635  DGTYILLANTFAAAGRWDDAAKVRKLMRDQGVKKEPGCSWIKVENTVHVFLVGDTAHPEI 694

Query: 366  EKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMP 545
            + +Y+ L+ L  ++RK GYVPDT+Y LHD E E KEY++  HSE++AV +G +  PRG  
Sbjct: 695  QVVYNYLEELRLKMRKMGYVPDTQYVLHDMETEQKEYALSTHSEKLAVVFGLLKLPRGAT 754

Query: 546  IRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            IRV KNLR CGDCH+A KFMSKV  R+I++RD NRFHHFR G+CSCG+YW
Sbjct: 755  IRVFKNLRICGDCHNAFKFMSKVEAREIIVRDGNRFHHFRDGECSCGNYW 804


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus] gi|449504088|ref|XP_004162249.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  278 bits (710), Expect = 2e-72
 Identities = 125/230 (54%), Positives = 170/230 (73%)
 Frame = +3

Query: 6    MIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQD 185
            MIDL  RAG+  +A+N++D+MPF+    +W  LL GCRT+G++DLG +AAE LFK  PQ 
Sbjct: 568  MIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQH 627

Query: 186  SAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQA 365
               YV+L N+YA  G W+D A+ +KLMRDRG KK  A SW + ++  + F+ DD  HP+ 
Sbjct: 628  DGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEV 687

Query: 366  EKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMP 545
              IY+ L+ L+ +++K GY+PDT+Y LHD E E KEY++  HSE++AVA+G M  P+G  
Sbjct: 688  LSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGAT 747

Query: 546  IRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            +RV KNLR CGDCH+AIKFMSKVVGR+IV+RD  RFHHF++G+CSC +YW
Sbjct: 748  VRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797


>ref|XP_001775099.1| predicted protein [Physcomitrella patens] gi|162673550|gb|EDQ60071.1|
            predicted protein [Physcomitrella patens]
          Length = 804

 Score =  278 bits (710), Expect = 2e-72
 Identities = 120/231 (51%), Positives = 173/231 (74%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CM+D+L+RAG L+EAE+++ T+P +P   MW  LL  CR + +V++G +AAE   K  PQ
Sbjct: 574  CMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQ 633

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            ++  YV L  IYA AGMW D AK++K M++RG KK    SW++     +SFV+ D+SHP+
Sbjct: 634  NAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPR 693

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
             ++IY+ L+ L +Q++  GYVPDTR+ +HD ++E KE +VCHHSE++A+AYG ++TP G 
Sbjct: 694  TQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGT 753

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PIR+ KNLR C DCH+A KF+SK+  R+I+ RDA+RFHHF++G+CSCGDYW
Sbjct: 754  PIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804


>ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Solanum lycopersicum]
          Length = 804

 Score =  277 bits (708), Expect = 3e-72
 Identities = 124/230 (53%), Positives = 169/230 (73%)
 Frame = +3

Query: 6    MIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQD 185
            ++DLLSRAGRL EA+ ++  MP++P   +W  LL GCRT+ +VDLG +AAE LF+  PQ 
Sbjct: 575  LVDLLSRAGRLLEAKEVIQNMPYKPKAPIWEALLAGCRTHRNVDLGVEAAEQLFELTPQH 634

Query: 186  SAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQA 365
               Y++L N +A AG WDDAAK++KLMRD+G KK    SW+  ++T + F+  D +HP+ 
Sbjct: 635  DGTYILLANTFAAAGRWDDAAKVRKLMRDQGVKKEPGCSWIKVENTVHVFLVGDTAHPEI 694

Query: 366  EKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGMP 545
            + +Y+ L+ L  ++RK G+VPDT+Y LHD E E KEY++  HSE++AV +G +  PRG  
Sbjct: 695  QVVYNYLEELRLKMRKMGFVPDTQYVLHDMETEQKEYALSTHSEKLAVVFGLLKLPRGAT 754

Query: 546  IRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            IRV KNLR CGDCH+A KFMSKV  R+I++RD NRFHHFR G+CSCG+YW
Sbjct: 755  IRVFKNLRICGDCHNAFKFMSKVEAREIIVRDGNRFHHFRDGECSCGNYW 804


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  276 bits (707), Expect = 4e-72
 Identities = 125/231 (54%), Positives = 166/231 (71%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            C +DLL RAG L+EAEN++ TMPFQP   +W  LL  CR + DV+ G +AAE + K +P 
Sbjct: 541  CFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPD 600

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            D   YV L NIYA AG ++DA K++++M  R   K    SW++     + F  +D+SHP+
Sbjct: 601  DDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPE 660

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            A++IY+ L  L EQI+++GYVPDTR+ LHD +EE K  ++C HSER+A+ YG M TP G 
Sbjct: 661  AKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGT 720

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PIR+VKNLR CGDCH+A KF+SKVVGR+I+ RDA+RFHHF  G CSCGD+W
Sbjct: 721  PIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771


>ref|XP_001774871.1| predicted protein [Physcomitrella patens] gi|162673765|gb|EDQ60283.1|
            predicted protein [Physcomitrella patens]
          Length = 902

 Score =  276 bits (706), Expect = 5e-72
 Identities = 125/231 (54%), Positives = 166/231 (71%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CM+DLL RAG+L EAE L+ TMPFQ + ++W  LLG CR +G+V +  +AAE+  K +  
Sbjct: 672  CMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLD 731

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            ++  YV L ++YA AGMWD AAK++KLM  RG  K    SW+   D  + FV++DRSHPQ
Sbjct: 732  NAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQ 791

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            +EKIY+ L  L   ++ +GYVPDTR  +HD +E  KE +VCHHSER+A+AYG ++TP G 
Sbjct: 792  SEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGT 851

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
             I + KNLR C DCH+A KF+SK+V R+I+ RD NRFHHF+ G CSCGDYW
Sbjct: 852  RIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355525106|gb|AET05560.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  276 bits (705), Expect = 6e-72
 Identities = 132/243 (54%), Positives = 175/243 (72%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CMIDLL RAGRL+EA++L+  MPFQP    W  LLG  R +G+ +LG KAAE +FK  PQ
Sbjct: 536  CMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 595

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            +S  YV+L N+YA +G W DA K++  MRD G +K   YSWV+ ++  ++F   D SHP+
Sbjct: 596  NSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPE 655

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
             E+IY+ L+ LD ++R+EGYV  T+  LHD EEE KE+ + +HSE++AVA+G +T P G 
Sbjct: 656  KERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGR 715

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW*Q*NILGLQ 722
            PIRV+KNLR C DCHSAIK +SK+VGR I++RD++RFHHF  G CSCGDYW       LQ
Sbjct: 716  PIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW-------LQ 768

Query: 723  FFI 731
            FF+
Sbjct: 769  FFL 771



 Score =  114 bits (284), Expect = 4e-23
 Identities = 81/232 (34%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CMIDLL R  RL+E                   LLG  R +G+ +LG KAA+  FK  PQ
Sbjct: 805  CMIDLLGRVDRLEEG-----------------ALLGASRIHGNTELGEKAAQMFFKMGPQ 847

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            +S                     I K MRD G +K   YSW + ++  ++F         
Sbjct: 848  NSG--------------------ISK-MRDVGVQKVPGYSWFEVQNKIHTF--------- 877

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
                 SV   L  +    G++ +    + + EEE KE ++ + SE +A A G +T P G 
Sbjct: 878  -----SVGLFLSRERENIGFLEELDLKMREREEE-KERTLKYLSENLAAALGILTIPVGR 931

Query: 543  PIRVVKN-LRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            P RV+K  +  C DC SAIK MSK+VGR I +RD+   H F    CSCG+YW
Sbjct: 932  PNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESICSCGEYW 980


>ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Cicer arietinum]
          Length = 763

 Score =  275 bits (704), Expect = 8e-72
 Identities = 128/231 (55%), Positives = 170/231 (73%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CMIDLL RAGRL+EA++L+  MPF+P    W  LLG  R +G+ +LG KAAE +FK  PQ
Sbjct: 533  CMIDLLGRAGRLEEAQDLMRNMPFEPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 592

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            +S  YV+L N+YA +G W DA K++  MRD G +K   YSWV+ ++  ++F   D SHP+
Sbjct: 593  NSGMYVLLSNLYAASGRWADADKMRLKMRDVGVQKVPGYSWVEVQNKIHTFSVGDCSHPE 652

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
             E+IY+ L+ LD ++R+EGYV  T+  LHD EEE KE+ + HHSE+IAVA+G +T P G 
Sbjct: 653  KERIYAFLEELDFKMRQEGYVSSTKLVLHDVEEEEKEHMLKHHSEKIAVAFGILTIPAGR 712

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PIRV+KNLR C DCH+AIK +SK+VGR I++RD++RFHHF  G CSCGDYW
Sbjct: 713  PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFSKGICSCGDYW 763


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  275 bits (702), Expect = 1e-71
 Identities = 118/231 (51%), Positives = 167/231 (72%)
 Frame = +3

Query: 3   CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
           CM+DL  RAG L EA N ++ MP +P+  +W  LLG CR +G+++L  +A E L +  P+
Sbjct: 140 CMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPE 199

Query: 183 DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
           +   YV+L NIYA AG WDDA K++K+M+DR  KK    SW++ ++  + F+  D SHPQ
Sbjct: 200 NPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQ 259

Query: 363 AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            E+IY  L+ L  Q++  GY+P+T + LHD EEE KE+ + HHSE++A+A+G ++TP G 
Sbjct: 260 IEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGT 319

Query: 543 PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            IRVVKNLR CGDCH+A KF+S++V R+IV+RD +RFHHF+ G+CSCGDYW
Sbjct: 320 TIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQCSCGDYW 370


>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  274 bits (701), Expect = 2e-71
 Identities = 124/231 (53%), Positives = 166/231 (71%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CM+DL SRAG L++A +L++ MPF     +W  LL  CR + +V LG  AAE L    PQ
Sbjct: 540  CMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQ 599

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            DSA YV+L NIYA AG W + AK++KLM  +  KK   YSW++ K+ ++SF++ D SHPQ
Sbjct: 600  DSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQ 659

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            +++IY  L+ L  +++  GY PDT+Y LHD EEE KE  +  HSER+A+A+G + TP G 
Sbjct: 660  SDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGT 719

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PI++VKNLR CGDCH+ IK +SK+ GRDIV+RD+NRFHHF+ G CSCGDYW
Sbjct: 720  PIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770


>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Vitis vinifera]
          Length = 866

 Score =  274 bits (701), Expect = 2e-71
 Identities = 124/231 (53%), Positives = 166/231 (71%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            CM+DL SRAG L++A +L++ MPF     +W  LL  CR + +V LG  AAE L    PQ
Sbjct: 636  CMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQ 695

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            DSA YV+L NIYA AG W + AK++KLM  +  KK   YSW++ K+ ++SF++ D SHPQ
Sbjct: 696  DSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQ 755

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
            +++IY  L+ L  +++  GY PDT+Y LHD EEE KE  +  HSER+A+A+G + TP G 
Sbjct: 756  SDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGT 815

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PI++VKNLR CGDCH+ IK +SK+ GRDIV+RD+NRFHHF+ G CSCGDYW
Sbjct: 816  PIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866


>ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Fragaria vesca subsp. vesca]
          Length = 780

 Score =  274 bits (700), Expect = 2e-71
 Identities = 120/231 (51%), Positives = 169/231 (73%)
 Frame = +3

Query: 3    CMIDLLSRAGRLKEAENLLDTMPFQPDKKMWMCLLGGCRTYGDVDLGRKAAEALFKCNPQ 182
            C+IDLL RAGRL+EA+NL+ TMPF+PD   W  LLG  R +G+  LG KAA+ +F+  P+
Sbjct: 550  CLIDLLGRAGRLEEAQNLMKTMPFEPDAATWGALLGASRIHGNTVLGEKAAKIIFEMEPE 609

Query: 183  DSAPYVVLFNIYAEAGMWDDAAKIKKLMRDRGAKKAVAYSWVDCKDTSYSFVSDDRSHPQ 362
            ++  YV+L N+YA +G W D  K++  MRD G +K   YSW++ ++  ++F   D  HP+
Sbjct: 610  NAGMYVLLSNLYASSGRWGDVGKMRLKMRDIGVRKVPGYSWIEVQNKIHTFSVGDSVHPE 669

Query: 363  AEKIYSVLKCLDEQIRKEGYVPDTRYALHDYEEESKEYSVCHHSERIAVAYGHMTTPRGM 542
             + IY+ L+ LD ++++EGYV  T+  LHD EEE KE+ + HHSE++AVA+G ++ P G 
Sbjct: 670  KDNIYAFLEELDLKMKREGYVSSTKLVLHDVEEEEKEHMLRHHSEKLAVAFGILSIPAGR 729

Query: 543  PIRVVKNLRACGDCHSAIKFMSKVVGRDIVIRDANRFHHFRHGKCSCGDYW 695
            PIRV+KNLR C DCH+AIK++SK+VGR I++RD+NRFHHF  G CSCGDYW
Sbjct: 730  PIRVMKNLRVCEDCHNAIKYISKIVGRTIILRDSNRFHHFSEGSCSCGDYW 780