BLASTX nr result
ID: Ephedra28_contig00027131
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00027131
(647 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006429952.1| hypothetical protein CICLE_v10013867mg [Citr... 79 9e-20
ref|XP_006481688.1| PREDICTED: protein RRP5 homolog isoform X1 [... 79 9e-20
ref|XP_006481689.1| PREDICTED: protein RRP5 homolog isoform X2 [... 79 9e-20
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat... 71 1e-19
ref|XP_004166831.1| PREDICTED: protein RRP5 homolog, partial [Cu... 71 1e-19
ref|NP_187803.4| protein ribosomal RNA processing 5 [Arabidopsis... 74 2e-19
dbj|BAB03107.1| pre-rRNA processing protein RRP5 [Arabidopsis th... 74 2e-19
gb|AAF23213.1|AC016795_26 putative pre-rRNA processing protein, ... 74 3e-19
ref|XP_006407387.1| hypothetical protein EUTSA_v10019877mg [Eutr... 76 3e-19
ref|XP_004234751.1| PREDICTED: protein RRP5 homolog [Solanum lyc... 69 3e-18
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar... 69 6e-18
gb|EXB29321.1| Protein RRP5-like protein [Morus notabilis] 67 2e-17
ref|XP_006296818.1| hypothetical protein CARUB_v10012800mg [Caps... 65 5e-17
ref|XP_004955773.1| PREDICTED: protein RRP5 homolog [Setaria ita... 60 2e-16
ref|XP_002459519.1| hypothetical protein SORBIDRAFT_02g006000 [S... 62 2e-16
ref|XP_006657541.1| PREDICTED: protein RRP5 homolog [Oryza brach... 59 1e-15
gb|AAG51058.1|AC069473_20 rRNA biogenesis protein, putative, 3' ... 55 7e-14
ref|XP_002972371.1| hypothetical protein SELMODRAFT_451250 [Sela... 64 2e-13
ref|XP_002971843.1| hypothetical protein SELMODRAFT_451253 [Sela... 62 6e-13
ref|XP_002322744.2| hypothetical protein POPTR_0016s06250g [Popu... 77 4e-12
>ref|XP_006429952.1| hypothetical protein CICLE_v10013867mg [Citrus clementina]
gi|557532009|gb|ESR43192.1| hypothetical protein
CICLE_v10013867mg [Citrus clementina]
Length = 1935
Score = 79.0 bits (193), Expect(2) = 9e-20
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Frame = -1
Query: 404 VELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVML 225
VELSLR +G T + + D+ + I+D+ P M+V+GYVK + ++ML
Sbjct: 1340 VELSLRSSLDGMSS-TNSSDLSTDVDTPGKHLEKIEDLSPNMIVQGYVKNVTSKGCFIML 1398
Query: 224 SANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLK-ADSSVRK 48
S LDA V + N+ D + ++ + +P GKLV+GR++SV+ + +V +TLK +DS
Sbjct: 1399 SRKLDAKVLLSNLSDGY--VESPEKEFPIGKLVAGRVLSVEPLSKRVEVTLKTSDSRTAS 1456
Query: 47 Q----DMDRFHIGDTVVG 6
Q ++ H+GD V+G
Sbjct: 1457 QSEINNLSNLHVGDIVIG 1474
Score = 44.3 bits (103), Expect(2) = 9e-20
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
+ EG IV GRI KI G+ GL+V++G GRV F EL + +PL
Sbjct: 1268 IHEGDIVGGRISKILSGVGGLVVQIGPHLYGRVHFTELKNICVSDPL 1314
>ref|XP_006481688.1| PREDICTED: protein RRP5 homolog isoform X1 [Citrus sinensis]
Length = 1934
Score = 79.0 bits (193), Expect(2) = 9e-20
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Frame = -1
Query: 404 VELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVML 225
VELSLR +G T + + D+ + I+D+ P M+V+GYVK + ++ML
Sbjct: 1339 VELSLRSSLDGMSS-TNSSDLSTDVDTPGKHLEKIEDLSPNMIVQGYVKNVTSKGCFIML 1397
Query: 224 SANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLK-ADSSVRK 48
S LDA V + N+ D + ++ + +P GKLV+GR++SV+ + +V +TLK +DS
Sbjct: 1398 SRKLDAKVLLSNLSDGY--VESPEKEFPIGKLVAGRVLSVEPLSKRVEVTLKTSDSRTAS 1455
Query: 47 Q----DMDRFHIGDTVVG 6
Q ++ H+GD V+G
Sbjct: 1456 QSEINNLSNLHVGDIVIG 1473
Score = 44.3 bits (103), Expect(2) = 9e-20
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
+ EG IV GRI KI G+ GL+V++G GRV F EL + +PL
Sbjct: 1256 IHEGDIVGGRISKILSGVGGLVVQIGPHLYGRVHFTELKNICVSDPL 1302
>ref|XP_006481689.1| PREDICTED: protein RRP5 homolog isoform X2 [Citrus sinensis]
Length = 1923
Score = 79.0 bits (193), Expect(2) = 9e-20
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Frame = -1
Query: 404 VELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVML 225
VELSLR +G T + + D+ + I+D+ P M+V+GYVK + ++ML
Sbjct: 1328 VELSLRSSLDGMSS-TNSSDLSTDVDTPGKHLEKIEDLSPNMIVQGYVKNVTSKGCFIML 1386
Query: 224 SANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLK-ADSSVRK 48
S LDA V + N+ D + ++ + +P GKLV+GR++SV+ + +V +TLK +DS
Sbjct: 1387 SRKLDAKVLLSNLSDGY--VESPEKEFPIGKLVAGRVLSVEPLSKRVEVTLKTSDSRTAS 1444
Query: 47 Q----DMDRFHIGDTVVG 6
Q ++ H+GD V+G
Sbjct: 1445 QSEINNLSNLHVGDIVIG 1462
Score = 44.3 bits (103), Expect(2) = 9e-20
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
+ EG IV GRI KI G+ GL+V++G GRV F EL + +PL
Sbjct: 1256 IHEGDIVGGRISKILSGVGGLVVQIGPHLYGRVHFTELKNICVSDPL 1302
>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
Length = 1898
Score = 70.9 bits (172), Expect(2) = 1e-19
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Frame = -1
Query: 383 LREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVMLSANLDAT 204
LR G + +KN N++++++ I+DI M V+GYVK I ++MLS L+A
Sbjct: 1308 LRSSAGILCQKNIECSNHENIASGRVKIEDIHAHMEVQGYVKNISPKGCFIMLSRGLEAK 1367
Query: 203 VDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSSV-----RKQDM 39
+ + N+ D + ID+ + +P GKLV GRI+SV+ + +V +TLK+ + D+
Sbjct: 1368 ILLSNLSDGY--IDNPEKEFPTGKLVRGRILSVEPLSKRVEVTLKSVTETGALRGSNNDL 1425
Query: 38 DRFHIGDTVVG 6
F GD + G
Sbjct: 1426 RSFSAGDIISG 1436
Score = 51.6 bits (122), Expect(2) = 1e-19
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
L EG IV GRI KI PG+ GL+V++G GRV + ELTD +PL
Sbjct: 1232 LNEGDIVGGRISKILPGVGGLLVQIGPHLFGRVHYTELTDCLVPDPL 1278
>ref|XP_004166831.1| PREDICTED: protein RRP5 homolog, partial [Cucumis sativus]
Length = 1323
Score = 70.9 bits (172), Expect(2) = 1e-19
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Frame = -1
Query: 383 LREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVMLSANLDAT 204
LR G + +KN N++++++ I+DI M V+GYVK I ++MLS L+A
Sbjct: 733 LRSSAGILCQKNIECSNHENIASGRVKIEDIHAHMEVQGYVKNISPKGCFIMLSRGLEAK 792
Query: 203 VDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSSV-----RKQDM 39
+ + N+ D + ID+ + +P GKLV GRI+SV+ + +V +TLK+ + D+
Sbjct: 793 ILLSNLSDGY--IDNPEKEFPTGKLVRGRILSVEPLSKRVEVTLKSVTETGALRGSNNDL 850
Query: 38 DRFHIGDTVVG 6
F GD + G
Sbjct: 851 RSFSAGDIISG 861
Score = 51.6 bits (122), Expect(2) = 1e-19
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
L EG IV GRI KI PG+ GL+V++G GRV + ELTD +PL
Sbjct: 657 LNEGDIVGGRISKILPGVGGLLVQIGPHLFGRVHYTELTDCLVPDPL 703
>ref|NP_187803.4| protein ribosomal RNA processing 5 [Arabidopsis thaliana]
gi|332641610|gb|AEE75131.1| protein ribosomal RNA
processing 5 [Arabidopsis thaliana]
Length = 1896
Score = 73.6 bits (179), Expect(2) = 2e-19
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G + + N D+V I+D+ P M V+GYVK +++
Sbjct: 1304 QIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFII 1363
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSS--- 57
LS ++A V + N+ D F + + + +P GKLV+GR+++V+ + ++ +TLK ++
Sbjct: 1364 LSRTVEAKVRLSNLCDTF--VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGR 1421
Query: 56 --VRKQDMDRFHIGDTVVG 6
D+ + H+GD + G
Sbjct: 1422 PKSESYDLKKLHVGDMISG 1440
Score = 48.1 bits (113), Expect(2) = 2e-19
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPLE 472
+ EG I+ GRI KI PG+ GL V+LG GRV F E+ D + +PL+
Sbjct: 1233 IHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLD 1280
>dbj|BAB03107.1| pre-rRNA processing protein RRP5 [Arabidopsis thaliana]
Length = 1765
Score = 73.6 bits (179), Expect(2) = 2e-19
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G + + N D+V I+D+ P M V+GYVK +++
Sbjct: 1173 QIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFII 1232
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSS--- 57
LS ++A V + N+ D F + + + +P GKLV+GR+++V+ + ++ +TLK ++
Sbjct: 1233 LSRTVEAKVRLSNLCDTF--VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGR 1290
Query: 56 --VRKQDMDRFHIGDTVVG 6
D+ + H+GD + G
Sbjct: 1291 PKSESYDLKKLHVGDMISG 1309
Score = 48.1 bits (113), Expect(2) = 2e-19
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPLE 472
+ EG I+ GRI KI PG+ GL V+LG GRV F E+ D + +PL+
Sbjct: 1102 IHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLD 1149
>gb|AAF23213.1|AC016795_26 putative pre-rRNA processing protein, 5' partial [Arabidopsis
thaliana]
Length = 1111
Score = 73.6 bits (179), Expect(2) = 3e-19
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G + + N D+V I+D+ P M V+GYVK +++
Sbjct: 519 QIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFII 578
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSS--- 57
LS ++A V + N+ D F + + + +P GKLV+GR+++V+ + ++ +TLK ++
Sbjct: 579 LSRTVEAKVRLSNLCDTF--VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGR 636
Query: 56 --VRKQDMDRFHIGDTVVG 6
D+ + H+GD + G
Sbjct: 637 PKSESYDLKKLHVGDMISG 655
Score = 48.1 bits (113), Expect(2) = 3e-19
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPLE 472
+ EG I+ GRI KI PG+ GL V+LG GRV F E+ D + +PL+
Sbjct: 448 IHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLD 495
>ref|XP_006407387.1| hypothetical protein EUTSA_v10019877mg [Eutrema salsugineum]
gi|557108533|gb|ESQ48840.1| hypothetical protein
EUTSA_v10019877mg [Eutrema salsugineum]
Length = 1926
Score = 76.3 bits (186), Expect(2) = 3e-19
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G G A N +V + I+D+ P M ++GYVK ++M
Sbjct: 1328 QIELSLRASLDGMGS-NHLAEASSNNVNVCKRIERIEDLSPDMGIQGYVKNTMSKGCFIM 1386
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSSVRK 48
LS LDA V + N+ D F + D + +P GKLV+GR+++V+ + +V +TLK + +
Sbjct: 1387 LSRTLDAKVLLSNLSDTF--VKDPEKEFPVGKLVTGRVLNVEPLSKRVEVTLKTVNGGGQ 1444
Query: 47 Q-----DMDRFHIGDTVVG 6
Q D+ +F +GD + G
Sbjct: 1445 QKSESYDLKKFQVGDIISG 1463
Score = 45.1 bits (105), Expect(2) = 3e-19
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -3
Query: 633 DGAVDELKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPLE 472
D A + EG I+ GRI +I P + GL V++G GRV F EL D + NPL+
Sbjct: 1251 DDATLFIHEGDILGGRISRILPCVGGLRVQIGPYVFGRVHFTELNDSWVCNPLD 1304
>ref|XP_004234751.1| PREDICTED: protein RRP5 homolog [Solanum lycopersicum]
Length = 1869
Score = 69.3 bits (168), Expect(2) = 3e-18
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Frame = -1
Query: 404 VELSLRKLREGHGEVTEKNGAICNYDSVSAPVY--GIDDIIPGMLVKGYVKGIFQNLLYV 231
++LSLR + T+K + D+V+ PV I+D+ P M+V+ YVK + +V
Sbjct: 1271 IDLSLRSI----SHKTQKEKLSAHNDTVNFPVLVEKIEDLRPNMMVQAYVKNVSPKGCFV 1326
Query: 230 MLSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSSVR 51
+LS +DA V + N+ D + +++ + +P GKLV GR++SV+ + +V +TL+ S+V
Sbjct: 1327 ILSRKVDAKVLLSNLSDGY--VENIEKGFPVGKLVIGRVVSVEPLSKRVEITLRTSSAVG 1384
Query: 50 KQDMDRFHIGDTVVG 6
D+ + + VG
Sbjct: 1385 APKSDKDALSNLTVG 1399
Score = 48.5 bits (114), Expect(2) = 3e-18
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
++EGS++ GRI KI PG+ GL+V++ G+V F ELTD +PL
Sbjct: 1199 IREGSVLGGRISKILPGVGGLLVQIDPHLYGKVHFTELTDPGVADPL 1245
>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1843
Score = 69.3 bits (168), Expect(2) = 6e-18
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G + + N D+V +D+ M V+GYVK +++
Sbjct: 1244 QIELSLRTSLDGMSSADHISEDLNNNDNVCKRFERFEDLSLDMGVQGYVKNTMSKGCFII 1303
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLK-----AD 63
LS ++A V + N+ D F + + + +P GKLV+GR+++V+ + ++ +TLK
Sbjct: 1304 LSRKVEAKVKLSNLCDTF--VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGQ 1361
Query: 62 SSVRKQDMDRFHIGDTVVG 6
DM + H+GD + G
Sbjct: 1362 PKSESYDMKKLHVGDMISG 1380
Score = 47.8 bits (112), Expect(2) = 6e-18
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPLE 472
+ EG I+ GRI KI PG+ GL V++G GRV F E+ D + NPL+
Sbjct: 1173 IHEGDILGGRISKILPGVGGLRVQIGPYVFGRVHFTEINDLWVPNPLD 1220
>gb|EXB29321.1| Protein RRP5-like protein [Morus notabilis]
Length = 1916
Score = 66.6 bits (161), Expect(2) = 2e-17
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q++LSLR R G K + + V I+D+ P M V+GYVK + +++
Sbjct: 1329 QIDLSLRSSRVGMISQDAKEAR--KKEPQTKFVETIEDLHPDMAVQGYVKNVTPKGCFIV 1386
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSSVRK 48
LS +DA + + N+ D + + + + +P GKLV+GR++SV+ + +V +TLK + +K
Sbjct: 1387 LSRKVDAKILLSNLSDGY--VINPEKEFPIGKLVTGRVLSVEPLSKRVQVTLKTLGASKK 1444
Query: 47 QD---MDRFHIGDTVVG 6
+ + H+GD + G
Sbjct: 1445 SETSNLSSLHVGDFISG 1461
Score = 48.5 bits (114), Expect(2) = 2e-17
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -3
Query: 609 EGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
EG I+ GRI KI G+ GL V++G GRV FAELTD + +PL
Sbjct: 1260 EGCILGGRISKILLGVGGLTVQIGPHTYGRVHFAELTDSWVSDPL 1304
>ref|XP_006296818.1| hypothetical protein CARUB_v10012800mg [Capsella rubella]
gi|482565527|gb|EOA29716.1| hypothetical protein
CARUB_v10012800mg [Capsella rubella]
Length = 1789
Score = 65.5 bits (158), Expect(2) = 5e-17
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G + N ++V I+D+ P M V+GYVK +++
Sbjct: 1328 QIELSLRTSLDGMNS-DHLSEDCSNNENVCKRFQRIEDLSPDMGVQGYVKNTMSKGCFII 1386
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSS--- 57
LS ++A V + N+ D F + + + +P GKLV+GR+++++ + ++ +TLK ++
Sbjct: 1387 LSRTVEAKVLLSNLCDTF--VKEPEKEFPVGKLVTGRVLNLEPLSKRIEVTLKTVNAGGH 1444
Query: 56 --VRKQDMDRFHIGDTVVG 6
D+ + H+GD + G
Sbjct: 1445 PKSESYDLTKLHVGDIISG 1463
Score = 48.5 bits (114), Expect(2) = 5e-17
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = -3
Query: 639 KLDGAVDE------LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENP 478
KLD ++ + + EG I+ GRI KI PGI G+ V++G GRV F E+ D + NP
Sbjct: 1243 KLDSSIPDDDGTLFIHEGDILGGRISKILPGIGGIRVQIGPYVFGRVHFTEINDLWVPNP 1302
Query: 477 LE 472
L+
Sbjct: 1303 LD 1304
>ref|XP_004955773.1| PREDICTED: protein RRP5 homolog [Setaria italica]
Length = 1904
Score = 60.5 bits (145), Expect(2) = 2e-16
Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAP-VYGIDDIIPGMLVKGYVKGIFQNLLYV 231
+V+LSLR + N + + + P + I+D++PG +KGYVK + ++
Sbjct: 1320 RVDLSLRS---SNIRTDSSNSRLFDEGATCIPRIEKIEDLLPGTEIKGYVKNVNPKGCFI 1376
Query: 230 MLSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSSVR 51
MLS ++A + + N+ D + +++ + +P G LV GR++S + +V +L+ ++ +
Sbjct: 1377 MLSRMVEARITLSNLSDEY--VENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKNTGSK 1434
Query: 50 KQDMDRFHIGDTVVG 6
+ D + D VG
Sbjct: 1435 LEKPDDINYSDLHVG 1449
Score = 51.6 bits (122), Expect(2) = 2e-16
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = -3
Query: 624 VDELKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
V++ K+G ++ GR++KI PG+ GL+V++G GRV + E+ D + +PL
Sbjct: 1246 VEQTKQGDVIGGRVQKILPGVGGLVVQIGPHLHGRVHYTEIVDSWVADPL 1295
>ref|XP_002459519.1| hypothetical protein SORBIDRAFT_02g006000 [Sorghum bicolor]
gi|241922896|gb|EER96040.1| hypothetical protein
SORBIDRAFT_02g006000 [Sorghum bicolor]
Length = 1862
Score = 61.6 bits (148), Expect(2) = 2e-16
Identities = 35/142 (24%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Frame = -1
Query: 407 QVELSLRK---LREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLL 237
+V+LSLR +R+ + +G + + + ++ + I D++PG +KGYVK +
Sbjct: 1273 RVDLSLRSSNLIRDSNN-----SGLVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGC 1327
Query: 236 YVMLSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSS 57
++M+S ++A + + N+ D + +++ + +P G LV GR++S + +V +L+ +
Sbjct: 1328 FIMISRMVEARITLSNLSDEY--VENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTG 1385
Query: 56 VRKQDMD-----RFHIGDTVVG 6
+ + +D H+GD + G
Sbjct: 1386 SKLEKLDDISYSDLHVGDIIDG 1407
Score = 50.1 bits (118), Expect(2) = 2e-16
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -3
Query: 621 DELKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
++ K+G I+ GR++KI PG+ GL+V++G GRV + E+ D + PL
Sbjct: 1200 EQTKQGDIIGGRVQKILPGVGGLVVQIGPHLRGRVHYTEIVDSWVTEPL 1248
>ref|XP_006657541.1| PREDICTED: protein RRP5 homolog [Oryza brachyantha]
Length = 1705
Score = 59.3 bits (142), Expect(2) = 1e-15
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Frame = -1
Query: 416 TENQVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLL 237
+E V + L LR E + ++ + + ++ I ++ PG +KGYVK +
Sbjct: 1120 SEGSVRVDL-SLRSSMCENSNQSRLFNDSEICTSRFENIVNMCPGTEIKGYVKSVNSKGC 1178
Query: 236 YVMLSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLKADSS 57
++M+S ++A + + N+ D + +++ +P G LV GR++S + + KV ++L+ ++
Sbjct: 1179 FIMVSRIIEARIILSNLSDEY--VENPQNDFPVGLLVHGRVLSAEPQSGKVEVSLRKNTG 1236
Query: 56 VRKQDMD-----RFHIGDTVVG 6
+ Q D H+GD + G
Sbjct: 1237 SKSQKSDDVSYSNLHVGDIIAG 1258
Score = 50.1 bits (118), Expect(2) = 1e-15
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -3
Query: 636 LDGAVDELKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPL 475
+ V+ K+G I+ GRI+K+ PG+ GL++++G GRV + E+ D + P+
Sbjct: 1047 VSATVEHTKQGDIIGGRIQKVLPGVGGLVIQIGPHLHGRVHYTEIVDSWVPEPI 1100
>gb|AAG51058.1|AC069473_20 rRNA biogenesis protein, putative, 3' partial; 75505-85642
[Arabidopsis thaliana]
Length = 1396
Score = 55.1 bits (131), Expect(2) = 7e-14
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = -1
Query: 407 QVELSLRKLREGHGEVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVM 228
Q+ELSLR +G + + N D+V I+D+ P M V+GYVK +++
Sbjct: 1303 QIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFII 1362
Query: 227 LSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSG 120
LS ++A V + N+ D F + + + +P GKLV+G
Sbjct: 1363 LSRTVEAKVRLSNLCDTF--VKEPEKEFPVGKLVTG 1396
Score = 48.1 bits (113), Expect(2) = 7e-14
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -3
Query: 615 LKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENPLE 472
+ EG I+ GRI KI PG+ GL V+LG GRV F E+ D + +PL+
Sbjct: 1232 IHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLD 1279
>ref|XP_002972371.1| hypothetical protein SELMODRAFT_451250 [Selaginella moellendorffii]
gi|300159838|gb|EFJ26457.1| hypothetical protein
SELMODRAFT_451250 [Selaginella moellendorffii]
Length = 1634
Score = 64.3 bits (155), Expect(2) = 2e-13
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Frame = -1
Query: 404 VELSLRKLREGHG--------EVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIF 249
+ELSLR GHG + E+ C +SVS ++ M V+G+VK +
Sbjct: 1060 LELSLRPSLGGHGGFESLPSYQTLERKSNACIVNSVS-------ELQQDMQVQGFVKDLT 1112
Query: 248 QNLLYVMLSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLK 69
+ +V+LS ++DA + + N+ +F + + E++PAGKLVSGRI+SV+ + V M+L
Sbjct: 1113 EKGCFVILSPSVDARILLKNLSSSF--VQNPAEMFPAGKLVSGRILSVRPLSGHVEMSL- 1169
Query: 68 ADSSVRKQDMDRFHIGDTVVG 6
+S F GD V G
Sbjct: 1170 -TTSQESSSWKTFCAGDIVSG 1189
Score = 37.7 bits (86), Expect(2) = 2e-13
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -3
Query: 621 DELKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENP 478
++ K+G ++ GRI ++ PG GL V++G GRV L D + ++P
Sbjct: 986 EDFKKGDLLGGRITRVRPGDGGLTVQVGWETFGRVHVTHLGDTWMDDP 1033
>ref|XP_002971843.1| hypothetical protein SELMODRAFT_451253 [Selaginella moellendorffii]
gi|300160142|gb|EFJ26760.1| hypothetical protein
SELMODRAFT_451253 [Selaginella moellendorffii]
Length = 1807
Score = 62.4 bits (150), Expect(2) = 6e-13
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Frame = -1
Query: 404 VELSLRKLREGHG--------EVTEKNGAICNYDSVSAPVYGIDDIIPGMLVKGYVKGIF 249
+ELSLR G+G + E+ C +SVS ++ M V+G+VK +
Sbjct: 1233 LELSLRPSLGGYGGFESLPSYQTLERKSNACIVNSVS-------ELQQDMQVQGFVKDVT 1285
Query: 248 QNLLYVMLSANLDATVDIDNVPDNFSDIDDALEIYPAGKLVSGRIMSVKHDTSKVTMTLK 69
+ +V+LS ++DA + + N+ +F + + E++PAGKLVSGRI+SV+ + V M+L
Sbjct: 1286 EKGCFVILSPSVDARILLKNLSSSF--VQNPAEMFPAGKLVSGRILSVRPLSGHVEMSL- 1342
Query: 68 ADSSVRKQDMDRFHIGDTVVG 6
+S F GD V G
Sbjct: 1343 -TTSQESSSWKTFCAGDIVSG 1362
Score = 37.7 bits (86), Expect(2) = 6e-13
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -3
Query: 621 DELKEGSIVDGRIKKICPGIDGLIVRLGKGRCGRVQFAELTDDFPENP 478
++ K+G ++ GRI ++ PG GL V++G GRV L D + ++P
Sbjct: 1159 EDFKKGDLLGGRITRVRPGDGGLTVQVGWETFGRVHVTHLGDTWMDDP 1206
>ref|XP_002322744.2| hypothetical protein POPTR_0016s06250g [Populus trichocarpa]
gi|550320958|gb|EEF04505.2| hypothetical protein
POPTR_0016s06250g [Populus trichocarpa]
Length = 1856
Score = 77.0 bits (188), Expect = 4e-12
Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = -1
Query: 335 NYDSVSAPVYGIDDIIPGMLVKGYVKGIFQNLLYVMLSANLDATVDIDNVPDNFSDIDDA 156
N D+ S V I+D+ P M+V+GYVK + ++ LS LDA + + N+ + + IDD
Sbjct: 1284 NQDAPSKHVDKIEDLQPDMVVQGYVKNVSSKGCFISLSRKLDAKILLSNLSEGY--IDDP 1341
Query: 155 LEIYPAGKLVSGRIMSVKHDTSKVTMTLKAD-----SSVRKQDMDRFHIGDTVVG 6
+ +P GKL++GR++SV+H + ++ +TLK S D+ R H+G+ + G
Sbjct: 1342 EKEFPIGKLLTGRVLSVEHLSKRIEVTLKKSGVSNASKSENSDLSRLHVGEIISG 1396