BLASTX nr result

ID: Ephedra28_contig00027101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00027101
         (639 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006847185.1| hypothetical protein AMTR_s00017p00248550 [A...    59   1e-06
ref|XP_006847183.1| hypothetical protein AMTR_s00017p00248290 [A...    59   2e-06

>ref|XP_006847185.1| hypothetical protein AMTR_s00017p00248550 [Amborella trichopoda]
           gi|548850214|gb|ERN08766.1| hypothetical protein
           AMTR_s00017p00248550 [Amborella trichopoda]
          Length = 285

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = -1

Query: 519 QLSKLPDNALLKILSMTKSYRFAVECSVVSRHWRTFYTRLPYLHFTHADILNNKDSKYP- 343
           ++S+LP   +L ILSM  + R A   SV+SR WR+ +T +P L+F         D+ Y  
Sbjct: 7   RISELPTEIILMILSML-TIREAARTSVLSRRWRSSWTSIPALNFV-------PDTAYSY 58

Query: 342 KIEYEEVVSRALFRHRSGIKAVHMEA---SDLHSLRSWLRFLCFNRVEELEVIVNRWDTF 172
              +  +V   L RHR  I A  ++         +  WL  +    +E+L +  + +D +
Sbjct: 59  SCHWANIVDSVLSRHRGPISAFRLDRIIWCSCEDIDRWLSIVSSRGIEDLAI--DFYDQY 116

Query: 171 GSNAYVVLPELFSCSSLTKLSFKCMTTYFAGYFSSPPFSSAPTYFPGFPLLK 16
               Y V P  FSCSSL  +                     PT F GF  LK
Sbjct: 117 --LPYKVHPSFFSCSSLVSIDLTSCKL------------EMPTDFEGFKFLK 154


>ref|XP_006847183.1| hypothetical protein AMTR_s00017p00248290 [Amborella trichopoda]
           gi|548850212|gb|ERN08764.1| hypothetical protein
           AMTR_s00017p00248290 [Amborella trichopoda]
          Length = 315

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = -1

Query: 519 QLSKLPDNALLKILSMTKSYRFAVECSVVSRHWRTFYTRLPYLHFTHADILNNKDSKYP- 343
           ++S+LP   +L ILSM  + R A   SV+SR WR+ +T +P L+F         D+ Y  
Sbjct: 7   RISELPTEIILMILSML-TIREAARTSVLSRRWRSSWTSIPALNFV-------PDTVYSY 58

Query: 342 KIEYEEVVSRALFRHRSGIKAVHMEA---SDLHSLRSWLRFLCFNRVEELEVIVNRWDTF 172
              +  +V   L RH   I A  ++         +  WL  +    +E+L  +++ +D +
Sbjct: 59  SCHWANIVDSVLSRHHGPISAFRLDRIIWCSSEDIDQWLSIVSSRGIEDL--VIDFYDQY 116

Query: 171 GSNAYVVLPELFSCSSLTKLSFKCMTTYFAGYFSSPPFSSAPTYFPGFPLLK 16
               Y V P  FSCSSL  +                     PT F GF  LK
Sbjct: 117 --LPYTVHPSFFSCSSLVSVDLTSCKL------------EMPTDFKGFKFLK 154


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