BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026981
         (1142 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   180   1e-53
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       175   2e-53
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665...   178   2e-53
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   184   2e-53
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   182   4e-53
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   174   5e-53
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   174   5e-53
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               174   5e-53
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   184   6e-53
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         182   8e-53
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   182   8e-53
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   181   1e-52
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran...   171   4e-52
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   165   4e-52
gb|ABR16307.1| unknown [Picea sitchensis]                             178   5e-52
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669...   183   9e-52
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...   166   4e-51
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]   174   9e-51
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran...   167   9e-51
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              157   3e-50

>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score =  180 bits (457), Expect(2) = 1e-53
 Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+MTW Y LK KS+V   F  F+K  + + G  +    +DNG  +TS EF  FC + GI 
Sbjct: 535  SRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLRTDNGGEYTSKEFSVFCQEAGIV 594

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
             ++T PY+PQ N V++RKNRT++EM R +L   +L    W E+  T+ Y+LN LP +S+ 
Sbjct: 595  HQLTAPYSPQQNGVSKRKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQ 654

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KPS+ HL+VF   C+ H+P  +RGKLD +A K V +GY  ESKGY+I  
Sbjct: 655  SKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYVAESKGYRIYS 714

Query: 985  EETKKILVSRDVKFVEDN 1038
                KI++SRDV F E++
Sbjct: 715  LSRMKIVISRDVHFDENS 732



 Score = 57.8 bits (138), Expect(2) = 1e-53
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
 Frame = +3

Query: 162 FLTNTELSNLWHNRLGHINNKSLSKVEAAVSHGLKNFLP-----TKTCSS*IIAKLHKKP 326
           F    + S +WH R GH N KSL  ++ A   G+   +P      +TC S  + K  ++P
Sbjct: 436 FSAKIDESVVWHKRYGHFNLKSLRFMQEA---GMVEDMPEISVNAQTCESCELGKQQRQP 492

Query: 327 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           F ++ +  +T  LE+IH D+CGP++ T++    Y   F +DF
Sbjct: 493 FPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDF 534


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  175 bits (443), Expect(2) = 2e-53
 Identities = 88/196 (44%), Positives = 129/196 (65%), Gaps = 1/196 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSE FE F KF+   +     +I    SD G  +TST F  +C ++GI+
Sbjct: 578  SRKTWVYFLKEKSEAFEVFKKFKVMVERTTDKQIKAVRSDRGGEYTSTTFMEYCEEQGIR 637

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            + +T PY PQ N VAERKNRT+++MVRS+L+S ++  ++W E+   A Y+ N  P   LD
Sbjct: 638  RFLTAPYTPQQNGVAERKNRTILDMVRSMLKSKKMPKEFWAEAVQCAIYVQNRCPHVKLD 697

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP++SHL+VF  + + H+P ++R KL+ K+ + V IGY E++KGY++LD
Sbjct: 698  DQTPQEAWSGQKPTVSHLKVFGSVAYAHVPDQRRTKLEDKSKRYVFIGYDEKTKGYKLLD 757

Query: 985  EETKKILVSRDVKFVE 1032
              +KK+ VSRDV+  E
Sbjct: 758  PISKKVTVSRDVQINE 773



 Score = 62.8 bits (151), Expect(2) = 2e-53
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = +3

Query: 159 CFLTNTE-LSNLWHNRLGHINNKSLSKV-EAAVSHGLKNF-LPTKTCSS*IIAKLHKKPF 329
           C   N E  ++LWH R GH+++  L ++ +  + HGL N     K C   +++K  +  F
Sbjct: 477 CLQVNIEDKASLWHLRFGHLHHGGLKELAKKNMVHGLPNMDYEGKFCEECVLSKHVRTSF 536

Query: 330 -RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            + +   + + LE+IH D+CGPITP +   KRY +TF +DF
Sbjct: 537 PKKAQYWAKQPLELIHTDICGPITPESFSGKRYFITFIDDF 577


>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
          Length = 678

 Score =  178 bits (451), Expect(2) = 2e-53
 Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE+F KF+   + E G  I    SD G  FTS +F  +C   GI+
Sbjct: 474  SRKTWVYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDRGGEFTSNKFNKYCEDHGIR 533

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            + +TVP +PQ N VAERKNRT++ MVRS+L+S ++  ++W ++   A Y+ N    RS+ 
Sbjct: 534  RPLTVPRSPQQNGVAERKNRTILNMVRSMLKSKKMLKEFWAKAVACAVYLTNCSLTRSVH 593

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP ISHL+VF  + + H+P E+R KLD K+ K V +GY   SKGY++ +
Sbjct: 594  EKTPQEAWSGRKPGISHLKVFGSIAYTHVPDEKRTKLDDKSEKYVFVGYDSRSKGYKLYN 653

Query: 985  EETKKILVSRDVKFVEDN 1038
              ++KI++SRDV+F E++
Sbjct: 654  PNSRKIVISRDVEFDEED 671



 Score = 59.7 bits (143), Expect(2) = 2e-53
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
 Frame = +3

Query: 174 TELSNLWHNRLGHINNKSLSKVEA--------AVSHGLKNFLPTKTCSS*IIAKLHKKPF 329
           T+ S LWH R GH+N   L ++          +++H      P + C   +I K  +K F
Sbjct: 379 TDSSWLWHLRFGHLNFDGLERLAKKEMVRDLPSINH------PDQLCERCLIGKQFRKSF 432

Query: 330 -RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            + ST  +T+ LE+IH D+CGPI P +    +Y L F +D+
Sbjct: 433 PKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDY 473


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  184 bits (466), Expect(2) = 2e-53
 Identities = 97/225 (43%), Positives = 141/225 (62%), Gaps = 3/225 (1%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE F KF+   + E G  I    SD G  FTS EF  +C   GI+
Sbjct: 557  SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++TVP +PQ N VAERKNRT++EM RS+L+S +L  + W E+   A Y+LN  P +S+ 
Sbjct: 617  RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP +SHLRVF  +   H+P E+R KLD K+ K + IGY   SKGY++ +
Sbjct: 677  GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKE--TYPTIQLEMPDNYRE 1113
             +TKK ++SR++ F E+     + ++++   +P  + + P+  RE
Sbjct: 737  PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTRE 781



 Score = 53.5 bits (127), Expect(2) = 2e-53
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +3

Query: 177 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 329
           E S LWH R GH+N         K + +    ++H      P + C   ++ K  K  F 
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516

Query: 330 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           + S+  + + LE+IH D+CGPI P ++    Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  182 bits (463), Expect(2) = 4e-53
 Identities = 90/198 (45%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+MTW Y LK KS+V   F  F+K  + + G  +    +DNG  +TS EF  FC + GI 
Sbjct: 1268 SRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQXVKVLRTDNGGEYTSKEFSVFCQEAGIV 1327

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
             ++T PY+PQ N V+ERKNRT++EM R +L   +L    W E+  T+ Y+LN LP +S+ 
Sbjct: 1328 HQLTAPYSPQXNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQ 1387

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KPS+ HL+VF   C+ H+P  +RGKLD +A K V +GY+ ESKGY+I  
Sbjct: 1388 SKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYS 1447

Query: 985  EETKKILVSRDVKFVEDN 1038
                KI++SRDV F E++
Sbjct: 1448 LSRMKIVISRDVHFDENS 1465



 Score = 53.9 bits (128), Expect(2) = 4e-53
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +3

Query: 162  FLTNTELSNLWHNRLGHINNKSLSKVEAA--VSHGLKNFLPTKTCSS*IIAKLHKKPF-R 332
            F    + S +WH R  H N KSL  ++ A  V    +  +  +TC S  + K  ++PF +
Sbjct: 1169 FSAKIDESVVWHKRYXHFNLKSLRFMQEAXMVEDMPEISVNAQTCESCELGKQQRQPFPQ 1228

Query: 333  SSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            + +  +T  LE+IH D+CGP++ T++    Y   F +DF
Sbjct: 1229 NMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDF 1267


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  174 bits (441), Expect(2) = 5e-53
 Identities = 88/197 (44%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+  WTY+L  KSE F+ F +F+ + + E G K+ C  SD G  + S EF  +C + GIK
Sbjct: 526  SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIK 585

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++T  Y PQ N VAERKNR+++ M R +L    +  K+W E+   A YILN  P ++L+
Sbjct: 586  RQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALN 645

Query: 808  CITPFQA-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
             ITP +   S+KPS+ HLR+F  L +  +P ++R KLD K+ K VM G S+ESK Y++ D
Sbjct: 646  DITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYD 705

Query: 985  EETKKILVSRDVKFVED 1035
              T KIL+SRDV+F E+
Sbjct: 706  PATGKILISRDVQFDEE 722



 Score = 62.0 bits (149), Expect(2) = 5e-53
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = +3

Query: 159 CFLTNTELSNLWHNRLGHINNKSL-SKVEAAVSHGLKNF---LPTKTCSS*IIAKLHKKP 326
           C     + +N+WH R GH+N++ L S  E  +  GL  F        C   +  K  ++ 
Sbjct: 424 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRES 483

Query: 327 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
             + S   ST+ L+++H D+CGPI P +   KRYIL F +DF
Sbjct: 484 IPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  174 bits (441), Expect(2) = 5e-53
 Identities = 88/197 (44%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+  WTY+L  KSE F+ F +F+ + + E G K+ C  SD G  + S EF  +C + GIK
Sbjct: 526  SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIK 585

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++T  Y PQ N VAERKNR+++ M R +L    +  K+W E+   A YILN  P ++L+
Sbjct: 586  RQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALN 645

Query: 808  CITPFQA-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
             ITP +   S+KPS+ HLR+F  L +  +P ++R KLD K+ K VM G S+ESK Y++ D
Sbjct: 646  DITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYD 705

Query: 985  EETKKILVSRDVKFVED 1035
              T KIL+SRDV+F E+
Sbjct: 706  PATGKILISRDVQFDEE 722



 Score = 62.0 bits (149), Expect(2) = 5e-53
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = +3

Query: 159 CFLTNTELSNLWHNRLGHINNKSL-SKVEAAVSHGLKNF---LPTKTCSS*IIAKLHKKP 326
           C     + +N+WH R GH+N++ L S  E  +  GL  F        C   +  K  ++ 
Sbjct: 424 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRES 483

Query: 327 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
             + S   ST+ L+++H D+CGPI P +   KRYIL F +DF
Sbjct: 484 IPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  174 bits (441), Expect(2) = 5e-53
 Identities = 88/197 (44%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+  WTY+L  KSE F+ F +F+ + + E G K+ C  SD G  + S EF  +C + GIK
Sbjct: 431  SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIK 490

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++T  Y PQ N VAERKNR+++ M R +L    +  K+W E+   A YILN  P ++L+
Sbjct: 491  RQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALN 550

Query: 808  CITPFQA-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
             ITP +   S+KPS+ HLR+F  L +  +P ++R KLD K+ K VM G S+ESK Y++ D
Sbjct: 551  DITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYD 610

Query: 985  EETKKILVSRDVKFVED 1035
              T KIL+SRDV+F E+
Sbjct: 611  PATGKILISRDVQFDEE 627



 Score = 62.0 bits (149), Expect(2) = 5e-53
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = +3

Query: 159 CFLTNTELSNLWHNRLGHINNKSL-SKVEAAVSHGLKNF---LPTKTCSS*IIAKLHKKP 326
           C     + +N+WH R GH+N++ L S  E  +  GL  F        C   +  K  ++ 
Sbjct: 329 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRES 388

Query: 327 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
             + S   ST+ L+++H D+CGPI P +   KRYIL F +DF
Sbjct: 389 IPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 430


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  184 bits (467), Expect(2) = 6e-53
 Identities = 97/225 (43%), Positives = 142/225 (63%), Gaps = 3/225 (1%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE F KF+   + E G  I    SD+G  FTS EF  +C   GI+
Sbjct: 557  SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIR 616

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++TVP +PQ N VAERKNRT++EM RS+L+S +L  + W E+   A Y+LN  P +S+ 
Sbjct: 617  RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP +SHLRVF  +   H+P E+R KLD K+ K + IGY   SKGY++ +
Sbjct: 677  GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYN 736

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKE--TYPTIQLEMPDNYRE 1113
             +TKK ++SR++ F E+     + ++++   +P  + + P+  RE
Sbjct: 737  PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTRE 781



 Score = 51.6 bits (122), Expect(2) = 6e-53
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
 Frame = +3

Query: 177 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 329
           E S LWH R GH+N         K + +    ++H      P + C   ++    K  F 
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGNQFKMSFP 516

Query: 330 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           + S+  + + LE+IH D+CGPI P ++    Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  182 bits (461), Expect(2) = 8e-53
 Identities = 96/225 (42%), Positives = 140/225 (62%), Gaps = 3/225 (1%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE F KF+   + E G  I    SD G  FTS EF  +C   GI+
Sbjct: 557  SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++TVP +PQ N V ERKNRT++EM RS+L+S +L  + W E+   A Y+LN  P +S+ 
Sbjct: 617  RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP +SHLRVF  +   H+P E+R KLD K+ K + IGY   SKGY++ +
Sbjct: 677  GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKE--TYPTIQLEMPDNYRE 1113
             +TKK ++SR++ F E+     + ++++   +P  + + P+  RE
Sbjct: 737  PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE 781



 Score = 53.5 bits (127), Expect(2) = 8e-53
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +3

Query: 177 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 329
           E S LWH R GH+N         K + +    ++H      P + C   ++ K  K  F 
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516

Query: 330 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           + S+  + + LE+IH D+CGPI P ++    Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  182 bits (461), Expect(2) = 8e-53
 Identities = 96/225 (42%), Positives = 140/225 (62%), Gaps = 3/225 (1%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE F KF+   + E G  I    SD G  FTS EF  +C   GI+
Sbjct: 557  SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++TVP +PQ N V ERKNRT++EM RS+L+S +L  + W E+   A Y+LN  P +S+ 
Sbjct: 617  RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP +SHLRVF  +   H+P E+R KLD K+ K + IGY   SKGY++ +
Sbjct: 677  GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKE--TYPTIQLEMPDNYRE 1113
             +TKK ++SR++ F E+     + ++++   +P  + + P+  RE
Sbjct: 737  PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE 781



 Score = 53.5 bits (127), Expect(2) = 8e-53
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +3

Query: 177 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 329
           E S LWH R GH+N         K + +    ++H      P + C   ++ K  K  F 
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516

Query: 330 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           + S+  + + LE+IH D+CGPI P ++    Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  181 bits (458), Expect(2) = 1e-52
 Identities = 96/225 (42%), Positives = 141/225 (62%), Gaps = 3/225 (1%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE F KF+   + E G  I    SD G  FTS EF  +C   GI+
Sbjct: 557  SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++TVP +PQ N VAERKNRT++EM RS+L+S +L  + W E+   A Y+LN  P +S+ 
Sbjct: 617  RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676

Query: 808  CITPFQACSFKPS-ISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S + S +SHLRVF  +   H+P E+R KLD K+ K + IGY   SKGY++ +
Sbjct: 677  GKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKE--TYPTIQLEMPDNYRE 1113
             +TKK ++SR++ F E+     + ++++   +P  + + P+  RE
Sbjct: 737  PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE 781



 Score = 54.3 bits (129), Expect(2) = 1e-52
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +3

Query: 177 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 329
           E S LWH R GH+N         K + +    ++H      P + C   ++ K  K  F 
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516

Query: 330 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           + S+  + + LE+IH D+CGPI P ++    Y L F +DF
Sbjct: 517 KESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556


>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trichinella spiralis] gi|316974460|gb|EFV57947.1|
            retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Trichinella spiralis]
          Length = 1324

 Score =  171 bits (432), Expect(2) = 4e-52
 Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 1/219 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ ++ Y LKHK+EV   F  F    + +   ++ C  +DNG  + +  F  F ++KGI+
Sbjct: 512  SRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIR 571

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
             E T+P  PQ N VAER NRTLVE  R++L  + LS   W E+  TA Y+ N  P ++L 
Sbjct: 572  HERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALR 631

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
             +TP +A S  KP+++HL+VF  L   H+P  QR K DPK+ + + +GY E SKGY+ +D
Sbjct: 632  KVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDPKSEERIFVGYCETSKGYRTVD 691

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKETYPTIQLEMPD 1101
             +TKK+ V+RDVKF+E   P    S++ +  T  L  PD
Sbjct: 692  RKTKKMYVTRDVKFLESQFPGTQASKEGS--TNSLMNPD 728



 Score = 62.4 bits (150), Expect(2) = 4e-52
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
 Frame = +3

Query: 144 NLC**CFLTNTELSNLWHNRLGHINNKSLSKVEAAVSHGLKNFLPTKT-CSS*IIAKLHK 320
           N C    +T  ++ +LWH RLGH++  S+  ++   + G+ +   TKT C + +  K  +
Sbjct: 408 NRCDQWAMTVHDVPDLWHRRLGHLSRGSMKLLQDGQATGIPSDAITKTDCVTCLKGKQCR 467

Query: 321 KPF-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            PF +S+T  S   LE++H D+CGP+   ++   RY L+F +DF
Sbjct: 468 LPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDF 511


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  165 bits (418), Expect(2) = 4e-52
 Identities = 84/196 (42%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+M+W Y L+ K+E FE F KF+   + + G  I    +D G  F S +FK FC ++G+ 
Sbjct: 462  SRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLH 521

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +E+T PY+P+ N VAERKNRT+VEM RS++++  LS  +W E   TA Y+LN+ P +++ 
Sbjct: 522  RELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVL 581

Query: 808  CITPFQA-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP++A    KP +SHL+VF  + +  I    R KLD K+ K + IGY  +SKGY++ +
Sbjct: 582  NRTPYEAWYGKKPWVSHLKVFGSVAYTLIESHNRSKLDEKSVKCIFIGYCSQSKGYKLYN 641

Query: 985  EETKKILVSRDVKFVE 1032
              + KI+VSR+V F E
Sbjct: 642  PVSGKIIVSRNVVFDE 657



 Score = 67.8 bits (164), Expect(2) = 4e-52
 Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
 Frame = +3

Query: 174 TELSNLWHNRLGHINNKSLSKV-EAAVSHGLKNFLPTKTCSS*IIAKLHKKPF---RSST 341
           T  SNLWH R GH+N K L  + +  +  GL        C   I  K  KKPF   RS  
Sbjct: 368 TSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRR 427

Query: 342 ISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSND 446
            SS  CLEIIH DLCGP+   +    RY L F+ND
Sbjct: 428 ASS--CLEIIHADLCGPMQTASFGGSRYFLLFTND 460


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score =  178 bits (452), Expect(2) = 5e-52
 Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 1/205 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+  W Y LK+K EVFE F +F+   + + G  I    +DNG  + + EF ++C   GIK
Sbjct: 164  SRRIWVYFLKNKDEVFEKFKEFKAFVEKQSGKSIKILRTDNGKEYVNKEFDHYCKYNGIK 223

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +E TVPY PQ N VAERKNRTL+EM R +L +  +  K+W E+  TATYI+N  P  ++ 
Sbjct: 224  REHTVPYTPQQNGVAERKNRTLMEMARCMLHARNMDPKFWAEAINTATYIVNRTPTIAVK 283

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP++SH +VF    + HIP E+R KLD K++K +M+GYSE SK Y++ D
Sbjct: 284  HKTPEEAWSRRKPTVSHFKVFGCDVYVHIPDEKRKKLDRKSHKCIMVGYSETSKAYRVYD 343

Query: 985  EETKKILVSRDVKFVEDNIPHISHS 1059
             E  +IL+ RDV F E  IP    S
Sbjct: 344  PEKNEILIRRDVIFDERCIPSTKSS 368



 Score = 54.3 bits (129), Expect(2) = 5e-52
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = +3

Query: 180 LSNLWHNRLGHINNKSLSKVEA-AVSHGLKNFLPTK-TCSS*IIAKLHKKPF-RSSTISS 350
           +S LWH R+GH+N KSLS ++   + +GL     ++  C   +  K H + F +  +  +
Sbjct: 71  VSRLWHERMGHLNYKSLSLMKRFEMVYGLPKISQSQGVCEGCMSGKQHMEKFIKGKSWRA 130

Query: 351 TRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
              L ++H DL GP+   ++   RY+LTF +D+
Sbjct: 131 KTPLHLVHSDLMGPLEHPSISGSRYVLTFIDDY 163


>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
          Length = 711

 Score =  183 bits (465), Expect(2) = 9e-52
 Identities = 92/198 (46%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y LK KSEVFE+F KF+   + E G  I    SD G  FTS +F  +C   GI+
Sbjct: 430  SRKTWVYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDRGGEFTSNKFNKYCEDHGIR 489

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            + +TVP +PQ N VAERKNRT++ MVRS+L+S ++  ++W E+   A Y+ N  P RS+ 
Sbjct: 490  RPLTVPRSPQQNGVAERKNRTILNMVRSMLKSKKMPKEFWAEAVACAVYLTNRSPTRSVH 549

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A S  KP ISHL+VF  + + H+P E+R KLD K+ K V +GY   SKGY++ +
Sbjct: 550  EKTPQEAWSGRKPGISHLKVFGSIAYTHVPDEKRTKLDDKSEKYVFVGYDSRSKGYKLYN 609

Query: 985  EETKKILVSRDVKFVEDN 1038
              ++KI++SRDV+F E++
Sbjct: 610  PNSRKIVISRDVEFDEED 627



 Score = 48.5 bits (114), Expect(2) = 9e-52
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +3

Query: 276 PTKTCSS*IIAKLHKKPF-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           P + C   +I K  +K F + ST  +T+ LE+IH D+CGPI P +    +Y L F +D+
Sbjct: 371 PDQLCEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDY 429


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score =  166 bits (421), Expect(2) = 4e-51
 Identities = 91/196 (46%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
 Frame = +1

Query: 454  MTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIKKE 633
            M W Y LK KSE F  F KF  KA +EK S     CS      T    + FC  +GI ++
Sbjct: 547  MCWVYFLKQKSETFATFKKF--KALVEKQSN----CSIK----TLRPMEVFCEDEGINRQ 596

Query: 634  VTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSL-DC 810
            VT+PY+PQ N  AERKNR+LVEM RS+L    L  K W E+  T+ Y+ N LP +++ D 
Sbjct: 597  VTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDD 656

Query: 811  ITPFQA-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILDE 987
            +TP +  C  KP++SHLR+F  +C+ HIP ++R KLD KA   ++IGYS ++KGY++   
Sbjct: 657  VTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLL 716

Query: 988  ETKKILVSRDVKFVED 1035
            E +K+ VSRDV F ED
Sbjct: 717  EDEKVEVSRDVVFQED 732



 Score = 63.2 bits (152), Expect(2) = 4e-51
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
 Frame = +3

Query: 171 NTELSNLWHNRLGHINNKSLSKVE-AAVSHGLKNFLPTK-TCSS*IIAKLHKKPFRSSTI 344
           N +    WH RLGH++NK L +++   + +GL  F  TK TC +  + K  +K F   + 
Sbjct: 449 NVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLGKQSRKSFPKESQ 508

Query: 345 SSTR-CLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
           + TR  LEI+H D+CGP+   ++   RY + F +D+
Sbjct: 509 TKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDY 544


>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  174 bits (440), Expect(2) = 9e-51
 Identities = 85/197 (43%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+  W + LK KSE  ++F+KF+   + +   KI    SDNG+ +TS EFK    ++GIK
Sbjct: 548  SRFCWIFFLKQKSEAIQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEFKALLTQEGIK 607

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            + +TVPY+PQ N V+ERKNRT++EM+R LL   Q+   +W E+   A  + NL+P  +L+
Sbjct: 608  QFLTVPYSPQQNGVSERKNRTIMEMIRCLLFEQQMPKYFWAEAANFAVTLQNLIPTTALN 667

Query: 808  CITPFQAC-SFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
             +TPF+    +KPSIS+++VF  + +  +P+++R KLD K    + +GYS  SKGY++ +
Sbjct: 668  SMTPFEVWHGYKPSISNVKVFGCIAYAQVPQQKRTKLDSKTQISINLGYSSVSKGYRLFN 727

Query: 985  EETKKILVSRDVKFVED 1035
             ETKK+ +SRDV F ED
Sbjct: 728  VETKKVFISRDVVFNED 744



 Score = 54.7 bits (130), Expect(2) = 9e-51
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
 Frame = +3

Query: 183 SNLWHNRLGHINNKSLSKVEAAVSHGLKNFLPT-----KTCSS*IIAKLHKKPF--RSST 341
           + LWH RLGHIN + +  +    S  L N +P      KTC   +  K  + PF  +S T
Sbjct: 456 ARLWHRRLGHINYQFIKNMG---SLNLVNDMPIITEVEKTCEVCLQGKQSRHPFPKQSQT 512

Query: 342 ISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            ++ R L++IH D+CGPI   ++   +Y + F +DF
Sbjct: 513 RTANR-LQLIHTDICGPIGTLSLNGNKYFILFIDDF 547


>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trichinella spiralis] gi|316974954|gb|EFV58419.1|
            retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Trichinella spiralis]
          Length = 1003

 Score =  167 bits (424), Expect(2) = 9e-51
 Identities = 89/219 (40%), Positives = 131/219 (59%), Gaps = 1/219 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ ++ Y LKHK+EV   F  F    + +   ++ C  +DNG  + +  F  F ++KGI+
Sbjct: 205  SRKSFVYFLKHKNEVLSKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIR 264

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
             E T+P  PQ N VAER NRTLVE  R++L  + LS   W E+  TA Y+ N  P ++L 
Sbjct: 265  HERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALR 324

Query: 808  CITPFQACS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
             +TP +A S  KP+++HL+VF  L   H+P  QR K D K+ + + +GY E SKGY+ +D
Sbjct: 325  KVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDLKSEERIFVGYCETSKGYRTVD 384

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKETYPTIQLEMPD 1101
             +TKK+ V+RDVKF+E   P    S++ +  T  L  PD
Sbjct: 385  RKTKKMYVTRDVKFLESQFPGTQASKEGS--TNSLMSPD 421



 Score = 60.8 bits (146), Expect(2) = 9e-51
 Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
 Frame = +3

Query: 144 NLC**CFLTNTELSNLWHNRLGHINNKSLSKVEAAVSHGLKNFLPTKT-CSS*IIAKLHK 320
           N C    +T  ++ +LWH +LGH++  S+  ++   + G+ +   TKT C + +  K  +
Sbjct: 101 NRCDQWAMTVHDVPDLWHRQLGHLSRGSMKLLQDGQATGIPSDAITKTDCVTCLKGKQCR 160

Query: 321 KPF-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            PF +S+T  S   LE++H D+CGP+   ++   RY L+F +DF
Sbjct: 161 LPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDF 204


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  157 bits (398), Expect(2) = 3e-50
 Identities = 90/228 (39%), Positives = 128/228 (56%), Gaps = 1/228 (0%)
 Frame = +1

Query: 448  SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 627
            S+ TW Y L  KSE F  F  F+   + E  S + C  +D G  FTS EF  FC   GI+
Sbjct: 543  SRKTWVYFLVEKSEAFAVFKSFKTYVEKETSSFLRCLRTDRGGEFTSQEFAIFCDVHGIR 602

Query: 628  KEVTVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 807
            +++T  Y PQ N VAERKNRT++ MVRS+L + +L   +W E+     ++LN  P  ++ 
Sbjct: 603  RQLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKLPKTFWPEAVNWTVHVLNRSPTFAVQ 662

Query: 808  CITPFQAC-SFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKDVMIGYSEESKGYQILD 984
              TP +A    KPS+ + RVF  L   H+P  +R KLD K+   V++G SEESK Y++ D
Sbjct: 663  NKTPEEAWGKLKPSVDYFRVFGCLSHVHVPDSKRTKLDDKSFSCVLLGVSEESKAYRLYD 722

Query: 985  EETKKILVSRDVKFVEDNIPHISHSQKETYPTIQLEMPDNYRESTTKD 1128
              ++KI++SRDV F ED         +E      LE  D+  E+T  +
Sbjct: 723  PISQKIIISRDVVFEEDKNWDWDKKYEEAI-VCDLEWGDDGEEATVNE 769



 Score = 69.3 bits (168), Expect(2) = 3e-50
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = +3

Query: 159 CFLTNTE-LSNLWHNRLGHINNKSLSKVEAA-VSHGLKNFLP-TKTCSS*IIAKLHKKPF 329
           CF T TE +  LWH R GH++ + L  ++   + +GL  F P +K C   ++ K H+   
Sbjct: 442 CFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGKQHRSSI 501

Query: 330 -RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 449
            + S   +   L+++H D+CGPI P +   KRY+LTF++DF
Sbjct: 502 PKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDF 542