BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026944
         (665 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827686.1| hypothetical protein AMTR_s00009p00256630 [A...   108   1e-21
ref|XP_006363169.1| PREDICTED: multiple RNA-binding domain-conta...   107   4e-21
ref|XP_004232621.1| PREDICTED: multiple RNA-binding domain-conta...   107   4e-21
ref|XP_006470745.1| PREDICTED: multiple RNA-binding domain-conta...    98   3e-18
ref|XP_006470744.1| PREDICTED: multiple RNA-binding domain-conta...    98   3e-18
ref|XP_006470743.1| PREDICTED: multiple RNA-binding domain-conta...    98   3e-18
ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp....    92   3e-18
ref|XP_001760318.1| predicted protein [Physcomitrella patens] gi...    97   3e-18
ref|XP_006413952.1| hypothetical protein EUTSA_v10024436mg [Eutr...    96   6e-18
ref|XP_006283107.1| hypothetical protein CARUB_v10004134mg [Caps...    96   1e-17
ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabid...    96   1e-17
ref|XP_006446262.1| hypothetical protein CICLE_v10017571mg [Citr...    96   1e-17
gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA bindi...    95   2e-17
ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...    95   2e-17
emb|CBI27238.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_002303703.2| RNA recognition motif-containing family prot...    93   6e-17
gb|EXB75133.1| Multiple RNA-binding domain-containing protein 1 ...    92   1e-16
gb|EMJ12551.1| hypothetical protein PRUPE_ppa001609mg [Prunus pe...    92   1e-16
ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta...    92   1e-16
ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...    92   2e-16

>ref|XP_006827686.1| hypothetical protein AMTR_s00009p00256630 [Amborella trichopoda]
           gi|548832306|gb|ERM95102.1| hypothetical protein
           AMTR_s00009p00256630 [Amborella trichopoda]
          Length = 678

 Score =  108 bits (270), Expect = 1e-21
 Identities = 55/93 (59%), Positives = 69/93 (74%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++LA+ F     IS+VH+V+DK TRRSKGF YVLY LPESA RA+ ELD SIFQGRLL
Sbjct: 144 TEDELAELFKKYGDISQVHLVVDKDTRRSKGFGYVLYTLPESAVRALKELDKSIFQGRLL 203

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HV+PAKQ  +  + Q  +  I+G N FK KRE+
Sbjct: 204 HVLPAKQQNAPEKPQHDLPMIQGSNKFKQKREE 236


>ref|XP_006363169.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Solanum tuberosum]
          Length = 838

 Score =  107 bits (266), Expect = 4e-21
 Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F     +S+VH+V+DK T+RSKG AYVLY LPESA RA+AELDSSIFQGRLL
Sbjct: 313 TEEELEEHFKAFGNVSQVHIVVDKDTKRSKGIAYVLYPLPESAARALAELDSSIFQGRLL 372

Query: 567 HVMPAKQLPSAPERQQSVGKI-EGMNTFKLKRED 665
           HVMPAKQ  S PE+ +++    +  NTFK KR++
Sbjct: 373 HVMPAKQKIS-PEKAETIANTKQSSNTFKQKRQE 405


>ref|XP_004232621.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Solanum lycopersicum]
          Length = 839

 Score =  107 bits (266), Expect = 4e-21
 Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F     +S+VH+V+DK T+RSKG AYVLY LPESA RA+AELDSSIFQGRLL
Sbjct: 314 TEEELEEHFRAFGNVSQVHIVVDKDTKRSKGIAYVLYPLPESAARALAELDSSIFQGRLL 373

Query: 567 HVMPAKQLPSAPERQQSVGKI-EGMNTFKLKRED 665
           HVMPAKQ  S PE+ +++    +  NTFK KR++
Sbjct: 374 HVMPAKQKIS-PEKAETIANTKQSSNTFKQKRQE 406


>ref|XP_006470745.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform X3 [Citrus sinensis]
          Length = 759

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+    +SEVH+V+DK T+RSKG AYVLY +PESA RAI  LD+SIFQGRLL
Sbjct: 228 TEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 287

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA+   S+ +++      +G  T K +RE+
Sbjct: 288 HVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 320


>ref|XP_006470744.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform X2 [Citrus sinensis]
          Length = 843

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+    +SEVH+V+DK T+RSKG AYVLY +PESA RAI  LD+SIFQGRLL
Sbjct: 312 TEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 371

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA+   S+ +++      +G  T K +RE+
Sbjct: 372 HVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 404


>ref|XP_006470743.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform X1 [Citrus sinensis]
          Length = 845

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+    +SEVH+V+DK T+RSKG AYVLY +PESA RAI  LD+SIFQGRLL
Sbjct: 314 TEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 373

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA+   S+ +++      +G  T K +RE+
Sbjct: 374 HVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 406


>ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315809|gb|EFH46232.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score = 92.0 bits (227), Expect(2) = 3e-18
 Identities = 47/93 (50%), Positives = 66/93 (70%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F+   +ISEVH+VLDK T+RS+G AY+LY +PE A RA+ ELD+S FQGRLL
Sbjct: 277 TEEELMEHFSKFGEISEVHLVLDKETKRSRGIAYILYPIPECAARAMEELDNSSFQGRLL 336

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HV+PAK   ++ ++      +    TFK KRE+
Sbjct: 337 HVLPAKHRETSDKQVNDTSNLP--KTFKQKREE 367



 Score = 26.2 bits (56), Expect(2) = 3e-18
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +2

Query: 20  ADDDSGNEIY*VSEEEISKED--AENGGSLIEEQNENPKSHVSYEKNEKTGRTSHDMQVE 193
           +D DS NE    SE+E S +D  AE  G   + +N      V     +K       M+VE
Sbjct: 187 SDSDSDNESEDSSEDEASDDDGKAEADGHDADIRNFPIDGDVEAGGVDKDD-DGDTMEVE 245

Query: 194 NSNSQMVGHENLHEDDSTNPKRIFVWNLTFT 286
            ++ ++        DD  +  R+FV NL +T
Sbjct: 246 -ADGKVAQELKADSDDVLDTGRLFVRNLPYT 275


>ref|XP_001760318.1| predicted protein [Physcomitrella patens]
           gi|162688332|gb|EDQ74709.1| predicted protein
           [Physcomitrella patens]
          Length = 878

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 45/92 (48%), Positives = 67/92 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+LA+ F    ++SEVH+VLDK T+RSK  A+VLY++PE A RA+ +LD SIFQGRL+
Sbjct: 342 TEEELAELFGKFGELSEVHLVLDKTTKRSKAMAFVLYMIPECAVRAMEQLDKSIFQGRLI 401

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRE 662
           H++PA++ P  PE +++     G   FK ++E
Sbjct: 402 HILPARRPPPPPETEKTTSMGPGSTKFKQEKE 433


>ref|XP_006413952.1| hypothetical protein EUTSA_v10024436mg [Eutrema salsugineum]
           gi|557115122|gb|ESQ55405.1| hypothetical protein
           EUTSA_v10024436mg [Eutrema salsugineum]
          Length = 815

 Score = 95.5 bits (236), Expect(2) = 6e-18
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F+   +ISEVH+V+DK T+RSKG AY+LY +PESA RA+ ELD+SIFQGRLL
Sbjct: 313 TEEELMEHFSEFGEISEVHIVVDKETKRSKGIAYILYPIPESAARAMKELDNSIFQGRLL 372

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           H++PAK   ++ +       +    TFK KRE+
Sbjct: 373 HILPAKHRETSDKLVNETSNLP--KTFKQKREE 403



 Score = 21.6 bits (44), Expect(2) = 6e-18
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 182 MQVENSNSQMVGHENLHEDDSTNPKRIFVWNLTFT 286
           M+VE +++++        DD  +  R+FV NL +T
Sbjct: 278 MEVE-ADAKLAQESKADSDDVLDTGRLFVRNLPYT 311


>ref|XP_006283107.1| hypothetical protein CARUB_v10004134mg [Capsella rubella]
           gi|482551812|gb|EOA16005.1| hypothetical protein
           CARUB_v10004134mg [Capsella rubella]
          Length = 827

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 49/93 (52%), Positives = 66/93 (70%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EEDL + F+    ISEVH+VLDK T+RSKG AY+LY +PE A RA+ ELD+SIFQGRLL
Sbjct: 315 TEEDLMEHFSKFGDISEVHLVLDKETKRSKGIAYILYPIPECAARAMEELDNSIFQGRLL 374

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           H++PAK   ++ ++      +    TFK KRE+
Sbjct: 375 HILPAKHRETSDKQVNETSNLP--KTFKQKREE 405


>ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
           gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid
           binding protein [Arabidopsis thaliana]
          Length = 816

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F+   KISEVH+VLDK T+RS+G AY+LYL+PE A RA+ ELD+S FQGRLL
Sbjct: 306 TEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAARAMEELDNSSFQGRLL 365

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           H++PAK   ++ ++      +    TFK KRE+
Sbjct: 366 HILPAKHRETSDKQVNDTSNLP--KTFKQKREE 396


>ref|XP_006446262.1| hypothetical protein CICLE_v10017571mg [Citrus clementina]
           gi|557548873|gb|ESR59502.1| hypothetical protein
           CICLE_v10017571mg [Citrus clementina]
          Length = 706

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 47/93 (50%), Positives = 66/93 (70%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+    +SEVH+V+DK T+RSKG AYVLY +PESA RAI  LD+SIFQGRLL
Sbjct: 175 TEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 234

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA+   S+ +++      +G    K +RE+
Sbjct: 235 HVMPARHKKSSDKQELHNSTSQGTKMLKQRREE 267


>gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA binding [Theobroma
           cacao]
          Length = 971

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/93 (52%), Positives = 64/93 (68%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L +FFN    +S+VH+V+DK T+RSKG AYVLY +PE + RA+ ELD S FQGRLL
Sbjct: 442 TEDELTEFFNKFGDVSQVHLVIDKDTKRSKGIAYVLYKVPECSVRALEELDKSSFQGRLL 501

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVM AK     P  +Q     +G  TFK KRE+
Sbjct: 502 HVMAAKL--KKPTGKQETDASQGSKTFKQKREE 532


>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+    +S+VH+V++K T+RSKG AYVL+ LPESA RA+ ELD+SIFQGRLL
Sbjct: 457 TEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLL 516

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA++   + +++ +    +   T K KRE+
Sbjct: 517 HVMPAREKKPSEKQEANASASQSSKTLKQKREE 549


>emb|CBI27238.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+    +S+VH+V++K T+RSKG AYVL+ LPESA RA+ ELD+SIFQGRLL
Sbjct: 241 TEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLL 300

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA++   + +++ +    +   T K KRE+
Sbjct: 301 HVMPAREKKPSEKQEANASASQSSKTLKQKREE 333


>ref|XP_002303703.2| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|550343191|gb|EEE78682.2| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 841

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 48/92 (52%), Positives = 67/92 (72%)
 Frame = +3

Query: 390 EEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLLH 569
           E++L + F+    IS+VH+V+DK T+RSKG AY+ Y LPESA RA+ ELD+SIFQGRLLH
Sbjct: 313 EDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTLPESAARALEELDNSIFQGRLLH 372

Query: 570 VMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           VMPAKQ   + ++   +   +G NT K +R++
Sbjct: 373 VMPAKQKILSNKQDDLLS--QGSNTLKQRRQE 402


>gb|EXB75133.1| Multiple RNA-binding domain-containing protein 1 [Morus notabilis]
          Length = 839

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F     IS+VH+ +DK T+RSKG AY+LY LPE A RA+ ELD+S FQGRLL
Sbjct: 353 TEEELEEVFGKFGSISQVHIPIDKDTKRSKGIAYILYTLPECAARALEELDNSSFQGRLL 412

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKR 659
           HVM AKQ   + + + +    +G+ TFK +R
Sbjct: 413 HVMLAKQKNPSEKLETAAATSQGLKTFKQRR 443


>gb|EMJ12551.1| hypothetical protein PRUPE_ppa001609mg [Prunus persica]
          Length = 793

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 48/93 (51%), Positives = 64/93 (68%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +E++L + F+     ++VH+++DK T RSKGF+YVLY LPESA+RA+ ELD SIFQGRLL
Sbjct: 270 TEDELEEVFSKFGD-AQVHLIIDKETNRSKGFSYVLYTLPESAERALEELDGSIFQGRLL 328

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPAKQ     +        +G  T K +RED
Sbjct: 329 HVMPAKQKNPTEKLGADNSASQGSKTLKQRRED 361


>ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Cucumis sativus]
          Length = 826

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 48/93 (51%), Positives = 64/93 (68%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F     +SEVH+V+DK TRRSKG AY+ Y LPESA+RA+ ELD+SIFQGRLL
Sbjct: 303 TEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEELDNSIFQGRLL 362

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA+   +      S+       +F+ KRE+
Sbjct: 363 HVMPAELKNTRETGVSSIAVCSLSKSFQKKREE 395


>ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
           domain-containing protein 1-like [Cucumis sativus]
          Length = 823

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 50/93 (53%), Positives = 67/93 (72%)
 Frame = +3

Query: 387 SEEDLADFFNGCVKISEVHVVLDKMTRRSKGFAYVLYLLPESAQRAIAELDSSIFQGRLL 566
           +EE+L + F     +SEVH+V+DK TRRSKG AY+ Y LPESA+RA+ ELD+SIFQGRLL
Sbjct: 303 TEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEELDNSIFQGRLL 362

Query: 567 HVMPAKQLPSAPERQQSVGKIEGMNTFKLKRED 665
           HVMPA +L    E+ + V  +    +F+ KRE+
Sbjct: 363 HVMPA-ELKKTLEKPEXVPLLS--KSFQKKREE 392