BLASTX nr result
ID: Ephedra28_contig00026942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00026942
(629 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006829234.1| hypothetical protein AMTR_s00001p00272430 [A... 99 8e-19
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 99 1e-18
gb|EPS73575.1| hypothetical protein M569_01175 [Genlisea aurea] 95 1e-17
ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily p... 91 2e-16
ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containi... 90 5e-16
ref|XP_006453335.1| hypothetical protein CICLE_v10007460mg [Citr... 89 1e-15
ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-15
gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis] 87 3e-15
ref|XP_006658757.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 86 7e-15
pdb|4M59|A Chain A, Crystal Structure Of The Pentatricopeptide R... 86 7e-15
ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays] gi|218... 86 7e-15
ref|XP_004487947.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [S... 86 1e-14
ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutr... 85 2e-14
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
gb|ESW10803.1| hypothetical protein PHAVU_009G239200g [Phaseolus... 84 3e-14
gb|ESW10802.1| hypothetical protein PHAVU_009G239200g [Phaseolus... 84 3e-14
ref|XP_004965679.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
>ref|XP_006829234.1| hypothetical protein AMTR_s00001p00272430 [Amborella trichopoda]
gi|548834213|gb|ERM96650.1| hypothetical protein
AMTR_s00001p00272430 [Amborella trichopoda]
Length = 811
Score = 99.4 bits (246), Expect = 8e-19
Identities = 42/97 (43%), Positives = 67/97 (69%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
RI E+ SG+ PC +T+NT VAGYS+L +FE+ D++ YM +H C P+E TY+ +++ Y
Sbjct: 711 RIISEMTASGMCPCTVTYNTFVAGYSSLGLFEEVRDVIKYMVEHNCRPNELTYNTVIDAY 770
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKK 334
C + F+DA F+ NIRE D +L+D +++L V++
Sbjct: 771 CRARKFRDAMDFVSNIRELDPLLEDQSVRKLATRVRE 807
>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
protein product [Vitis vinifera]
Length = 821
Score = 98.6 bits (244), Expect = 1e-18
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R E+ SGI PCI+T+NT VAGYS MF + +++ YM QH C P+E TY +V+ Y
Sbjct: 721 RTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGY 780
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKH 331
C +++A F+ NI E DK D L+RL + +++H
Sbjct: 781 CKGKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRIREH 818
>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 98.6 bits (244), Expect = 1e-18
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R E+ SGI PCI+T+NT VAGYS MF + +++ YM QH C P+E TY +V+ Y
Sbjct: 721 RTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGY 780
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKH 331
C +++A F+ NI E DK D L+RL + +++H
Sbjct: 781 CKGKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRIREH 818
>gb|EPS73575.1| hypothetical protein M569_01175 [Genlisea aurea]
Length = 760
Score = 95.1 bits (235), Expect = 1e-17
Identities = 41/94 (43%), Positives = 64/94 (68%)
Frame = -3
Query: 612 ELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSG 433
E+ + GI PCI+T+NTLV G+S MF + +++DYM ++GC P+E TY+ +V+ YC +
Sbjct: 663 EMTERGIRPCIVTYNTLVGGFSGRGMFNEVDELIDYMVENGCRPNELTYNKVVDGYCKAR 722
Query: 432 SFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKH 331
+DA F+G IRE D + GL+RL Y V+++
Sbjct: 723 RSKDAMDFVGRIRERDGGYGEEGLQRLVYRVREN 756
>ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Solanum tuberosum]
Length = 842
Score = 91.3 bits (225), Expect = 2e-16
Identities = 39/98 (39%), Positives = 62/98 (63%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
RIF ++ + GI PCI+T+NT +AG++ MF + +++ YM QH C P+E TY IV+ Y
Sbjct: 742 RIFSQMTEKGIRPCIVTYNTFIAGFAARGMFSEVNELISYMIQHECRPNELTYKTIVDGY 801
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKH 331
C + +QDA F+ NI+E D + L+R V+++
Sbjct: 802 CKAKRYQDAMDFVLNIKEKDNTFDEESLQRFASRVREN 839
>gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 845
Score = 91.3 bits (225), Expect = 2e-16
Identities = 39/98 (39%), Positives = 61/98 (62%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
RIF E+ GI PCI T+NT VAGY++ MF + D++ YM QH C P+E TY +V+ Y
Sbjct: 745 RIFSEMTTRGIRPCIFTYNTFVAGYASQGMFTEIDDVIGYMIQHNCKPNELTYKIVVDGY 804
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKH 331
C + +++A F+ I+E D + + RL + V+++
Sbjct: 805 CKARRYKEAMDFVSKIKEIDDSFDEQSIDRLAFRVREN 842
>ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Solanum lycopersicum]
Length = 842
Score = 90.1 bits (222), Expect = 5e-16
Identities = 38/98 (38%), Positives = 62/98 (63%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+F ++ + GI PCI+T+NT +AG++ MF + +++ YM QH C P+E TY IV+ Y
Sbjct: 742 RVFSQMTEKGIRPCIVTYNTFMAGFAARGMFSEVNELISYMIQHKCRPNELTYKTIVDGY 801
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKH 331
C + +QDA F+ NI+E D + L+R V+++
Sbjct: 802 CKAKRYQDAMDFVLNIKEKDNTFDEESLQRFASRVREN 839
>ref|XP_006453335.1| hypothetical protein CICLE_v10007460mg [Citrus clementina]
gi|567922660|ref|XP_006453336.1| hypothetical protein
CICLE_v10007460mg [Citrus clementina]
gi|568840495|ref|XP_006474202.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Citrus sinensis]
gi|557556561|gb|ESR66575.1| hypothetical protein
CICLE_v10007460mg [Citrus clementina]
gi|557556562|gb|ESR66576.1| hypothetical protein
CICLE_v10007460mg [Citrus clementina]
Length = 824
Score = 88.6 bits (218), Expect = 1e-15
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+ E+ + GI PCI T+NT V+GY+ MF + +++ +M QH C P+E TY +V+ Y
Sbjct: 724 RMLYEMTNRGIRPCIFTYNTFVSGYAGQGMFTEIDEVIKHMFQHNCKPNELTYKIVVDGY 783
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKK 334
C + +++A FL I+E D D +KRL + V++
Sbjct: 784 CKARKYKEAMDFLSKIKERDDSFNDESVKRLTFRVRE 820
>ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Fragaria vesca subsp. vesca]
Length = 846
Score = 87.8 bits (216), Expect = 2e-15
Identities = 38/91 (41%), Positives = 54/91 (59%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
RI E+ GI PCI T+NT V GYS MF + +++ YM Q+ C P+E TY +V+ Y
Sbjct: 737 RILSEMTTRGIRPCIFTYNTFVTGYSGRGMFSEVDEVISYMTQNNCKPNELTYKIVVDGY 796
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRL 352
C + F++A FL I+E D D ++RL
Sbjct: 797 CKARKFEEAMDFLSKIKEIDNSFDDGYVERL 827
>gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis]
Length = 807
Score = 87.4 bits (215), Expect = 3e-15
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+ E+ SGI PCI T+NT V GY MF + +++ YM ++ C P+E TY +V+ Y
Sbjct: 707 RVLSEMTTSGIRPCIFTYNTFVTGYVGRGMFSEVDEVIRYMIENNCRPNELTYKIVVDGY 766
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRL 352
C +G +++A F+ NI+E D D ++RL
Sbjct: 767 CKAGRYKEAMDFVSNIKEVDNSFDDHSVQRL 797
>ref|XP_006658757.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02860-like [Oryza brachyantha]
Length = 677
Score = 86.3 bits (212), Expect = 7e-15
Identities = 38/100 (38%), Positives = 64/100 (64%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+F E+ SG+ P ++T+N V Y + +MFE+AID+V YM GC P+E+TY+ I++ Y
Sbjct: 577 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIDLVRYMVTQGCKPNERTYNTILQGY 636
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKHQR 325
CT+G DA +F+ N+ + + ++L+ ++ KH R
Sbjct: 637 CTNGRLVDAKRFVSNLPQLHPGISKQEQQKLFEVLAKHTR 676
>pdb|4M59|A Chain A, Crystal Structure Of The Pentatricopeptide Repeat Protein
Ppr10 In Complex With An 18-nt Psaj Rna Element
gi|554793797|pdb|4M59|B Chain B, Crystal Structure Of
The Pentatricopeptide Repeat Protein Ppr10 In Complex
With An 18-nt Psaj Rna Element
Length = 718
Score = 86.3 bits (212), Expect = 7e-15
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -3
Query: 627 ERIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVEN 448
+R+ E++ G+ PC +T++TLV GYS+L MF +A +++ YM QHG P E TY +VE+
Sbjct: 619 QRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVES 678
Query: 447 YCTSGSFQDAYKFLGNIRETD 385
YC + F++A FL + ETD
Sbjct: 679 YCRAKRFEEARGFLSEVSETD 699
>ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays] gi|218684531|gb|ACL01094.1|
chloroplast pentatricopeptide repeat protein 10 [Zea
mays] gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10
[Zea mays]
Length = 786
Score = 86.3 bits (212), Expect = 7e-15
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -3
Query: 627 ERIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVEN 448
+R+ E++ G+ PC +T++TLV GYS+L MF +A +++ YM QHG P E TY +VE+
Sbjct: 687 QRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVES 746
Query: 447 YCTSGSFQDAYKFLGNIRETD 385
YC + F++A FL + ETD
Sbjct: 747 YCRAKRFEEARGFLSEVSETD 767
>ref|XP_004487947.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Cicer arietinum]
Length = 840
Score = 85.5 bits (210), Expect = 1e-14
Identities = 38/100 (38%), Positives = 60/100 (60%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
RI E+ GI PC ITFNT ++ Y+ +F +A +++ YM +HGCMP+E TY +++ Y
Sbjct: 740 RILSEMTGYGIQPCPITFNTFLSCYAGKGLFAEAGEVIRYMIEHGCMPNELTYKIVIDGY 799
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKHQR 325
C + ++A F+ I+E D D +KRL +K+ R
Sbjct: 800 CKAKKHKEALDFVSKIKEVDISFDDQSVKRLASCIKESLR 839
>ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein
SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 85.5 bits (210), Expect = 1e-14
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = -3
Query: 627 ERIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVEN 448
+RI E+I G+ PC++T++TLV GY++L MF +A ++++YM QH P E TY +V++
Sbjct: 684 QRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDS 743
Query: 447 YCTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKHQRGQ 319
YC + F++A FL + ETD L L ++ Q G+
Sbjct: 744 YCKAKRFEEARSFLSEVSETDPNFDKKVLHTLAAYIEDAQFGR 786
>ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutrema salsugineum]
gi|557110259|gb|ESQ50550.1| hypothetical protein
EUTSA_v10022551mg [Eutrema salsugineum]
Length = 838
Score = 84.7 bits (208), Expect = 2e-14
Identities = 35/96 (36%), Positives = 59/96 (61%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+ E+ + GI PCI T+NT V+GY+ + MFE+ D+++ M ++ C P+E TY +V+ Y
Sbjct: 738 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFEEIEDVIECMAKNECRPNELTYKMVVDGY 797
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVK 337
C +G + +A F+ I+ D D ++RL V+
Sbjct: 798 CRAGRYSEAMDFVSKIKTLDAYFDDQSIQRLAQRVR 833
>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Glycine max]
Length = 829
Score = 84.7 bits (208), Expect = 2e-14
Identities = 33/90 (36%), Positives = 58/90 (64%)
Frame = -3
Query: 621 IFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYC 442
+ E+ GI P I+T+NT ++GY+ + +F++A +++ +M +H C PSE TY +V+ YC
Sbjct: 728 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 787
Query: 441 TSGSFQDAYKFLGNIRETDKVLKDAGLKRL 352
+G +++A F+ I+E D D +KRL
Sbjct: 788 KAGKYEEAMDFVSKIKELDISFDDQSVKRL 817
>gb|ESW10803.1| hypothetical protein PHAVU_009G239200g [Phaseolus vulgaris]
Length = 831
Score = 84.3 bits (207), Expect = 3e-14
Identities = 32/91 (35%), Positives = 58/91 (63%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+ E+ GI P ++++NT ++GY+ + +F++AI+++ +M +H C P+E TY +V+ Y
Sbjct: 729 RVLSEMTTKGIQPTVVSYNTFLSGYAGMQLFDEAIEVIRFMIEHNCRPNELTYKIVVDGY 788
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRL 352
C +G + A F+ I+E D D +KRL
Sbjct: 789 CKAGKHEQAMDFVSKIKEIDISFDDRSVKRL 819
>gb|ESW10802.1| hypothetical protein PHAVU_009G239200g [Phaseolus vulgaris]
Length = 644
Score = 84.3 bits (207), Expect = 3e-14
Identities = 32/91 (35%), Positives = 58/91 (63%)
Frame = -3
Query: 624 RIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENY 445
R+ E+ GI P ++++NT ++GY+ + +F++AI+++ +M +H C P+E TY +V+ Y
Sbjct: 542 RVLSEMTTKGIQPTVVSYNTFLSGYAGMQLFDEAIEVIRFMIEHNCRPNELTYKIVVDGY 601
Query: 444 CTSGSFQDAYKFLGNIRETDKVLKDAGLKRL 352
C +G + A F+ I+E D D +KRL
Sbjct: 602 CKAGKHEQAMDFVSKIKEIDISFDDRSVKRL 632
>ref|XP_004965679.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Setaria italica]
Length = 788
Score = 84.3 bits (207), Expect = 3e-14
Identities = 38/103 (36%), Positives = 63/103 (61%)
Frame = -3
Query: 627 ERIFMELIDSGINPCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVEN 448
+RI E+I G+ PC++T++TLV GY++L MF +A +++ YM QH P E TY +V++
Sbjct: 686 QRILSEMIADGMPPCVVTYHTLVGGYASLEMFSEAREVISYMIQHNLRPMELTYRRVVDS 745
Query: 447 YCTSGSFQDAYKFLGNIRETDKVLKDAGLKRLYYLVKKHQRGQ 319
YC + +++A FL + ETD L+ L ++ Q G+
Sbjct: 746 YCKAKRYEEARDFLSGVSETDPNFDKKVLRTLVDRIEDAQFGR 788