BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026919
         (580 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus pe...    87   2e-15
ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13
ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ...    78   1e-12
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar...    78   2e-12
gb|EPS64672.1| hypothetical protein M569_10104 [Genlisea aurea]        77   3e-12
ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    77   3e-12
ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containi...    76   5e-12
ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citr...    76   5e-12
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein...    76   5e-12
ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutr...    74   2e-11
ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, part...    72   1e-10
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,...    70   5e-10
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    70   5e-10
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus...    69   9e-10

>gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus persica]
          Length = 714

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 37/92 (40%), Positives = 61/92 (66%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP V  ++ + DP++ L +FY+  ++G+KH +P+Y  ++ KL R+  F  VE I+ H+R
Sbjct: 57  PIPFVSDVKEVEDPEEGLSLFYEYHQMGFKHDYPSYSALLYKLARSRNFEAVETILGHVR 116

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFH 12
             ++H K+ L  ALI  Y  A +VE+AIE+F+
Sbjct: 117 DRNIHCKDTLFIALIQHYGKANLVEKAIELFN 148


>ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 492

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 34/92 (36%), Positives = 61/92 (66%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP++  L+ I DP +A+ +F+D +++G+KH +PTY  +V KL ++  F  VE ++ +++
Sbjct: 62  PIPLLADLKQIQDPDEAISLFHDYQQMGFKHDYPTYSCLVYKLAKSRNFEAVESLLGYLQ 121

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFH 12
            + +  KE L   LI  Y  A +V++A+E+FH
Sbjct: 122 THYIRCKETLFIGLIQHYGKAQLVDKAVELFH 153


>ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 506

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 34/92 (36%), Positives = 61/92 (66%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP++  L+ I DP +A+ +F+D +++G+KH +PTY  +V KL ++  F  VE ++ +++
Sbjct: 62  PIPLLADLKQIQDPDEAISLFHDYQQMGFKHDYPTYSCLVYKLAKSRNFEAVESLLGYLQ 121

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFH 12
            + +  KE L   LI  Y  A +V++A+E+FH
Sbjct: 122 THYIRCKETLFIGLIQHYGKAQLVDKAVELFH 153


>ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 468

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 33/95 (34%), Positives = 58/95 (61%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP V  ++    P+ AL +F +  ++G+KH +P+Y  ++ KL R   F  +E I+ H+R
Sbjct: 58  PIPFVSDVKQTHGPEDALSLFREYHEMGFKHDYPSYSALIYKLARNRNFEAIETILGHVR 117

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             ++H K+ L  AL   YA A ++ +AI++FH ++
Sbjct: 118 DRNIHCKDTLFIALFQHYAKANLINKAIQLFHEMN 152


>ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Solanum lycopersicum]
          Length = 473

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 34/94 (36%), Positives = 61/94 (64%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP++  L+ I DP +A+ +F+  +++G+KH +PTY  +V KL ++  F  VE ++ +++
Sbjct: 65  PIPLLADLKQIQDPDEAISLFHYYQQMGFKHDYPTYSCLVYKLAKSQNFEVVETLLGYLQ 124

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFHAI 6
            + +  KE L   LI  Y  A +V++A+E+FH I
Sbjct: 125 THHIRCKETLFIGLIQHYGRAQLVDKAVELFHKI 158


>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338258|gb|EFH68675.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 32/99 (32%), Positives = 66/99 (66%)
 Frame = -3

Query: 299 QPPGPIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIV 120
           +P   +P +  L+ I DP++AL +F+  +++G++H +P+Y +++ KL ++  F  V++I+
Sbjct: 45  KPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL 104

Query: 119 SHIRANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             +R  +V  +E+L  ALI  Y  AG V++A+++FH ++
Sbjct: 105 RLVRYRNVRCRESLFMALIQHYGKAGWVDKAVDVFHKLT 143


>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g07740, mitochondrial; Flags: Precursor
           gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
           repeats PF|01535 [Arabidopsis thaliana]
           gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
           thaliana] gi|31376389|gb|AAP49521.1| At1g07730
           [Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190050|gb|AEE28171.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 33/99 (33%), Positives = 65/99 (65%)
 Frame = -3

Query: 299 QPPGPIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIV 120
           +P   +P +  L+ I DP++AL +F+  +++G++H +P+Y +++ KL ++  F  V++I+
Sbjct: 45  KPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL 104

Query: 119 SHIRANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             +R  +V  +E+L   LI  Y  AG V++AI++FH I+
Sbjct: 105 RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143


>gb|EPS64672.1| hypothetical protein M569_10104 [Genlisea aurea]
          Length = 752

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP +  L+   +P   L +  D  + GYKH +P Y ++V +L RAG F +VE ++ +++
Sbjct: 339 PIPFLDQLKICRNPDDYLSLLRDFSEQGYKHHYPCYASLVYRLARAGRFDDVELVLDYLK 398

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIF 15
           + DV  +E L   LI  Y  AG++ERA+E+F
Sbjct: 399 SRDVRCREALFIGLIRRYGKAGLIERAVEVF 429


>ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g07740, mitochondrial-like [Cucumis sativus]
          Length = 460

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = -3

Query: 284 IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIRA 105
           IP V  ++ + DP +AL +F +  + G+KH +P+Y +++ KL R+  F  VE I+ H+R 
Sbjct: 50  IPFVTDVKEVKDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRN 109

Query: 104 NDVHIKENLLCALILFYADAGMVERAIEIFH 12
            ++   E L  ALI  Y  A +VE+ IE+FH
Sbjct: 110 RNIRCNETLFVALIQHYGKAHLVEKGIELFH 140


>ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cucumis sativus]
          Length = 460

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = -3

Query: 284 IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIRA 105
           IP V  ++ + DP +AL +F +  + G+KH +P+Y +++ KL R+  F  VE I+ H+R 
Sbjct: 50  IPFVTDVKEVKDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRN 109

Query: 104 NDVHIKENLLCALILFYADAGMVERAIEIFH 12
            ++   E L  ALI  Y  A +VE+ IE+FH
Sbjct: 110 RNIRCNETLFVALIQHYGKAHLVEKGIELFH 140


>ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Citrus sinensis]
          Length = 477

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/95 (37%), Positives = 61/95 (64%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP V  L+ I DP +AL +F+   ++G KH +P+Y +++ KL RA  F  VE ++ +I+
Sbjct: 67  PIPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQ 126

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             ++  KE L  +LI  Y  A +V++AIE+F+ ++
Sbjct: 127 DFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMT 161


>ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citrus clementina]
           gi|557526673|gb|ESR37979.1| hypothetical protein
           CICLE_v10030177mg [Citrus clementina]
          Length = 797

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/95 (37%), Positives = 61/95 (64%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           PIP V  L+ I DP +AL +F+   ++G KH +P+Y +++ KL RA  F  VE ++ +I+
Sbjct: 65  PIPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQ 124

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             ++  KE L  +LI  Y  A +V++AIE+F+ ++
Sbjct: 125 DFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMT 159


>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 951

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 33/92 (35%), Positives = 60/92 (65%)
 Frame = -3

Query: 287 PIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIR 108
           P P V  L+ I +P +AL +F++  ++GYKH +P+Y +++ KL ++  F  VE ++ +++
Sbjct: 540 PNPFVTNLKEIQEPDEALSLFHEYYQMGYKHDYPSYSSLIYKLAKSRNFEAVETLLGYLQ 599

Query: 107 ANDVHIKENLLCALILFYADAGMVERAIEIFH 12
             ++H +E L  AL   Y  A ++E+AIE+FH
Sbjct: 600 NLNIHCQETLFNALFESYGKARLIEKAIELFH 631


>ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutrema salsugineum]
           gi|557095543|gb|ESQ36125.1| hypothetical protein
           EUTSA_v10009298mg [Eutrema salsugineum]
          Length = 460

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 30/99 (30%), Positives = 66/99 (66%)
 Frame = -3

Query: 299 QPPGPIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIV 120
           +P   +P +  L++I DP+++L +F+  +++G++H +P+Y +++ KL R+  F  V++++
Sbjct: 46  KPWEEVPFLTDLKDIEDPEESLSLFHHYQQMGFRHDYPSYSSLIYKLARSRNFDAVDQVL 105

Query: 119 SHIRANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             +R  +V  +E+L  ALI  Y  AG V++A+++F  ++
Sbjct: 106 RLVRYRNVRCRESLFMALIQHYGKAGSVDKAVDVFRKMT 144


>ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, partial [Capsella rubella]
           gi|482548139|gb|EOA12336.1| hypothetical protein
           CARUB_v10007904mg, partial [Capsella rubella]
          Length = 551

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 31/99 (31%), Positives = 64/99 (64%)
 Frame = -3

Query: 299 QPPGPIPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIV 120
           +P   +  +  L+ I +P++AL +F   +++G++H +P+Y +++ KL ++  F  V++I+
Sbjct: 46  KPWEEVSFLTDLKEIEEPEEALALFNQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL 105

Query: 119 SHIRANDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
             IR  +V  +E+L  ALI  Y  AG V++A+++FH ++
Sbjct: 106 RLIRYRNVRCRESLFIALIQHYGKAGSVDKAVDVFHKMT 144


>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 31/94 (32%), Positives = 57/94 (60%)
 Frame = -3

Query: 284 IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIRA 105
           IP V  ++ + DP KAL +F+D  + G++H +P+Y  +V KL R+  F  VE ++ +++ 
Sbjct: 49  IPFVNNVKEVEDPDKALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVETVLGYLQD 108

Query: 104 NDVHIKENLLCALILFYADAGMVERAIEIFHAIS 3
            +V  ++ L  AL   Y   G+V +AI +F+ ++
Sbjct: 109 FNVRCRDTLFIALFEHYGKVGLVAKAIRLFNEMT 142


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 32/90 (35%), Positives = 56/90 (62%)
 Frame = -3

Query: 284 IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIRA 105
           IP +  L+++ DP  AL +F   +++G+KH +P+Y  +V KL R+  F  VE ++ +++ 
Sbjct: 382 IPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQN 441

Query: 104 NDVHIKENLLCALILFYADAGMVERAIEIF 15
            ++  +E L  ALI  Y  + M E+AIE+F
Sbjct: 442 INIRCRETLFIALIQHYGKSQMPEKAIELF 471


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 31/90 (34%), Positives = 56/90 (62%)
 Frame = -3

Query: 284 IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIRA 105
           IP +  L+++ DP  AL +F   +++G+KH +P+Y  +V KL R+  F  VE ++ +++ 
Sbjct: 453 IPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQN 512

Query: 104 NDVHIKENLLCALILFYADAGMVERAIEIF 15
            ++  +E L  ALI  Y  + M E+A+E+F
Sbjct: 513 INIRCRETLFIALIQHYGKSQMPEKAVELF 542


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 31/90 (34%), Positives = 56/90 (62%)
 Frame = -3

Query: 284 IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFSEVEKIVSHIRA 105
           IP +  L+++ DP  AL +F   +++G+KH +P+Y  +V KL R+  F  VE ++ +++ 
Sbjct: 91  IPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQN 150

Query: 104 NDVHIKENLLCALILFYADAGMVERAIEIF 15
            ++  +E L  ALI  Y  + M E+A+E+F
Sbjct: 151 INIRCRETLFIALIQHYGKSQMPEKAVELF 180


>gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus vulgaris]
          Length = 447

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 31/102 (30%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = -3

Query: 302 HQPPGP-----IPMVKTLENISDPKKALKVFYDVEKLGYKHFHPTYFTIVCKLCRAGLFS 138
           H+ P P     IP V  ++ + DP++AL +F+  ++ G++H +P+Y  ++ KL R+ +F 
Sbjct: 32  HERPTPKFRRRIPFVTEVKTVEDPEEALSLFHRYKEQGFRHHYPSYAALLYKLARSRMFE 91

Query: 137 EVEKIVSHIRANDVHIKENLLCALILFYADAGMVERAIEIFH 12
            VE I++H++  D+  +E++  AL  +Y      ++A+E+F+
Sbjct: 92  AVETILAHMKDTDMQCRESVFIALFQYYGP----QKAVELFN 129