BLASTX nr result

ID: Ephedra28_contig00026891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026891
         (693 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006373661.1| hypothetical protein POPTR_0016s02520g [Popu...    61   4e-07
gb|EXC30767.1| hypothetical protein L484_027942 [Morus notabilis]      60   5e-07
ref|XP_006832891.1| hypothetical protein AMTR_s00095p00112100 [A...    60   9e-07
ref|XP_002278583.1| PREDICTED: uncharacterized protein LOC100249...    57   6e-06

>ref|XP_006373661.1| hypothetical protein POPTR_0016s02520g [Populus trichocarpa]
           gi|550320658|gb|ERP51458.1| hypothetical protein
           POPTR_0016s02520g [Populus trichocarpa]
          Length = 231

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +1

Query: 334 RDSPRFSCDGREISRSSS-PMDLNREHVLRCSSLKIRDSSPSRIDTPKRSPGLVARLMGL 510
           +DSPRFSCD   + RS + P ++ R   L         +SP R   P   P LVARLMGL
Sbjct: 93  KDSPRFSCD--IVPRSPTLPAEIRRSKSL---------NSPERFRAP---PALVARLMGL 138

Query: 511 DDIPGSSSLQETTNLQDEEESFNEKSPYLATVQTLEKRQRLISELESCDRDLQALKRIVE 690
            DIP  ++ +                     +   EKR+RL+  LE CD DL+ALK+I++
Sbjct: 139 SDIPPLTTSE---------------------LAVAEKRRRLLGALEKCDEDLKALKKIID 177


>gb|EXC30767.1| hypothetical protein L484_027942 [Morus notabilis]
          Length = 413

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
 Frame = +1

Query: 313 SSKISMLRDSPRFSCDGREISRSSSPMDLNREHVLRCS-------SLKIRDS----SPSR 459
           S+KI+   +SP  +  G   ++  +  + N      C          KIR S    SP  
Sbjct: 69  SNKINETNNSPPLTVKGESKAKDQAKCNTNNLQRFSCEVPRSPTLPAKIRRSNSVNSPEN 128

Query: 460 IDTPKRSPGLVARLMGLDDIPGSSSLQETTNLQDEEESFNEKSPYLATVQ--TLEKRQRL 633
              P   P L+ARLMGL++ P ++S           ++   +SP +   +  T EKR+RL
Sbjct: 129 FRAP---PALMARLMGLEEAPTATS-----------KALPPRSPLVVPSEYSTAEKRRRL 174

Query: 634 ISELESCDRDLQALKRIVEA 693
           +  LE CDRDL+ALK+I++A
Sbjct: 175 LGALEKCDRDLKALKKIIDA 194


>ref|XP_006832891.1| hypothetical protein AMTR_s00095p00112100 [Amborella trichopoda]
           gi|548837391|gb|ERM98169.1| hypothetical protein
           AMTR_s00095p00112100 [Amborella trichopoda]
          Length = 446

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
 Frame = +1

Query: 346 RFSCDGREISRSSS-PMDLNREHVLRCSSLKIRD-SSPSRIDTPKRSPGLVARLMGLDDI 519
           RFSCD   I RS +   D+         S   R   SP ++  P   PGLVARLMGL+++
Sbjct: 101 RFSCD---IPRSPTLSQDIRNNWRSNSVSSGFRQMGSPEKLQRP---PGLVARLMGLEEL 154

Query: 520 PGSSSLQETTNLQDEEESFNEKSPYLATVQTLEKRQRLISELESCDRDLQALKRIVEA 693
           P    L    NL ++ +  + +S         +KR+ ++  LE CD DL+AL++I+EA
Sbjct: 155 PSPRCLNLPENLPEKPQEISPESAE-------KKRRIILGALEKCDEDLRALRKIIEA 205


>ref|XP_002278583.1| PREDICTED: uncharacterized protein LOC100249911 [Vitis vinifera]
           gi|297741721|emb|CBI32853.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +1

Query: 346 RFSCDGREISRSSS-PMDLNREHVLRCSSLKIRDSSPSRIDTPKRSPGLVARLMGLDDIP 522
           RFSCD   + RS + P ++ R +           +SP+   TP   P LVARLMGL+ IP
Sbjct: 80  RFSCD---VQRSPTLPAEIRRSNSA---------NSPANFRTP---PALVARLMGLNVIP 124

Query: 523 GSSSLQETTNLQDEEESFNEKSPYLATVQTLEKRQRLISELESCDRDLQALKRIVEA 693
            + +  E+T                      EKRQ+L+  LE CD DL+ALK+I++A
Sbjct: 125 AAPASPEST---------------------AEKRQKLLGALEKCDEDLKALKKIIDA 160


Top