BLASTX nr result

ID: Ephedra28_contig00026665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026665
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781581.1| predicted protein [Physcomitrella patens] gi...    60   4e-07
ref|XP_006844218.1| hypothetical protein AMTR_s00006p00266620 [A...    56   6e-06

>ref|XP_001781581.1| predicted protein [Physcomitrella patens]
           gi|162666991|gb|EDQ53632.1| predicted protein
           [Physcomitrella patens]
          Length = 662

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 17/88 (19%)
 Frame = -2

Query: 214 KRGFIDKKSSATFRLVYKEYDPTDPFNDNNTSGRVFTRVDGGGAHVSGFTDEDPQSS--- 44
           K+ FIDKK +ATF L++++ +  D    ++ S RVFTRVD G   V GF++EDP+++   
Sbjct: 87  KKKFIDKKKAATFVLMHRDTEDAD----DDVSARVFTRVDAGFGQVPGFSEEDPRTNPDY 142

Query: 43  --ECND------------SVFADADDEG 2
             E +D            SVFADA++EG
Sbjct: 143 GYETDDGEEDEGAAVEESSVFADAEEEG 170


>ref|XP_006844218.1| hypothetical protein AMTR_s00006p00266620 [Amborella trichopoda]
           gi|548846617|gb|ERN05893.1| hypothetical protein
           AMTR_s00006p00266620 [Amborella trichopoda]
          Length = 539

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = -2

Query: 226 MGKSKRGFIDKKSSATFRLVYKEYDPTDPFND-NNTSGRVFTRVDGGGAHVSGFTDEDPQ 50
           MG+ K+ F+DKK SATF L+ +  D ++P ++   +S RVF RVD     V GF++ED  
Sbjct: 1   MGRKKKSFVDKKKSATFCLLAR--DSSEPASEAQASSDRVFVRVDNNPYCVDGFSEEDCF 58

Query: 49  SSE------CNDSVFADADDE 5
           +S        ++S+FADAD++
Sbjct: 59  ASNNQNQEPVDESIFADADED 79


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