BLASTX nr result
ID: Ephedra28_contig00026517
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00026517
(442 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26314.1| unknown [Picea sitchensis] 52 2e-13
ref|XP_006848617.1| hypothetical protein AMTR_s00171p00029550 [A... 50 1e-08
ref|XP_001761350.1| predicted protein [Physcomitrella patens] gi... 46 2e-08
ref|XP_001772018.1| predicted protein [Physcomitrella patens] gi... 46 3e-08
ref|XP_001758013.1| predicted protein [Physcomitrella patens] gi... 45 3e-08
ref|XP_006855090.1| hypothetical protein AMTR_s00031p00169100 [A... 48 2e-07
>gb|ABK26314.1| unknown [Picea sitchensis]
Length = 252
Score = 51.6 bits (122), Expect(2) = 2e-13
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Frame = +2
Query: 65 VSVEKLESLLFDSIAEIVKSIRDAPFVRYVYE------XXXXXXXXXXXXXSESSWPVIK 226
V+ EKLE + DS+ EIVK I++APF+ YV++ SW I+
Sbjct: 90 VTSEKLEEWMKDSVMEIVKHIQEAPFLHYVFDRKSPSASLKKRRDYADMFGKVDSWAKIR 149
Query: 227 DVLNESSPDCVILVQKV 277
+ L + SPD VILVQK+
Sbjct: 150 NSLRDISPDAVILVQKL 166
Score = 49.3 bits (116), Expect(2) = 2e-13
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3
Query: 342 VVEGKSAGVSACYILKTTQVPSAGGRCTHFYIS 440
V++G+S GVSACYILKTTQ+ SA G CT F ++
Sbjct: 201 VIQGRSVGVSACYILKTTQIVSANGYCTSFCLT 233
>ref|XP_006848617.1| hypothetical protein AMTR_s00171p00029550 [Amborella trichopoda]
gi|548851968|gb|ERN10198.1| hypothetical protein
AMTR_s00171p00029550 [Amborella trichopoda]
Length = 262
Score = 49.7 bits (117), Expect(2) = 1e-08
Identities = 30/87 (34%), Positives = 42/87 (48%)
Frame = +2
Query: 17 LTTALSWPDSESSYSAVSVEKLESLLFDSIAEIVKSIRDAPFVRYVYEXXXXXXXXXXXX 196
LTT + + VS E L+ + DSI EIV++I PF+ YVY
Sbjct: 92 LTTNTTDNRKHKNQVPVSYEDLDQWMVDSIPEIVRNIGKVPFLIYVYSPMDGEGRRWQEI 151
Query: 197 XSESSWPVIKDVLNESSPDCVILVQKV 277
SW I+ LNE PD +ILV+++
Sbjct: 152 VGVDSWNEIRRSLNERGPDGIILVEEL 178
Score = 35.0 bits (79), Expect(2) = 1e-08
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 357 SAGVSACYILKTTQVPSAGGRCTHFYIS 440
S S CYILKTT++ S G CTHF ++
Sbjct: 214 SCSSSCCYILKTTRICSTVGFCTHFCLA 241
>ref|XP_001761350.1| predicted protein [Physcomitrella patens]
gi|162687356|gb|EDQ73739.1| predicted protein
[Physcomitrella patens]
Length = 419
Score = 46.2 bits (108), Expect(2) = 2e-08
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Frame = +2
Query: 2 TASSPLTTALSWPDSESSYSAVSVEKLESLLFDSIAEIVKSIRDAPFVRYVYEXXXXXXX 181
TAS + A++ P + + + VE+ I EIVK+I++APF++YV++
Sbjct: 199 TASCGMPCAINCPINRDTNIQLWVEEF-------IPEIVKNIQEAPFLQYVFDSKGRPGR 251
Query: 182 XXXXXX------SESSWPVIKDVLNESSPDCVILVQKVE 280
+ WP I++ L+ ++PD V+LVQK+E
Sbjct: 252 SQRQKIPRDLGKNPDFWPPIREFLSRAAPDGVLLVQKME 290
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 342 VVEGKSAGVSACYILKTTQVPSAGGRCT 425
+V+ + +ACY+LKTTQVPS+ G CT
Sbjct: 330 LVQARGVHANACYLLKTTQVPSSAGICT 357
>ref|XP_001772018.1| predicted protein [Physcomitrella patens]
gi|162676619|gb|EDQ63099.1| predicted protein
[Physcomitrella patens]
Length = 464
Score = 46.2 bits (108), Expect(2) = 3e-08
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Frame = +2
Query: 101 SIAEIVKSIRDAPFVRYVYEXXXXXXXXXXXXXSESS------WPVIKDVLNESSPDCVI 262
SI +IVK+I++APF++YV++ S+ WP I + L++++PD VI
Sbjct: 219 SIVQIVKNIQEAPFLQYVFDSKGRLGTSQRQKISQDVFDNAEYWPPILESLSKAAPDGVI 278
Query: 263 LVQKVE 280
LVQK+E
Sbjct: 279 LVQKLE 284
Score = 37.0 bits (84), Expect(2) = 3e-08
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 342 VVEGKSAGVSACYILKTTQVPSAGGRCT 425
+V+ ++ +ACY+LKTT+VPS+ G CT
Sbjct: 324 LVQARAVHANACYLLKTTRVPSSAGICT 351
>ref|XP_001758013.1| predicted protein [Physcomitrella patens]
gi|162690890|gb|EDQ77255.1| predicted protein
[Physcomitrella patens]
Length = 217
Score = 44.7 bits (104), Expect(2) = 3e-08
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +2
Query: 80 LESLLFDSIAEIVKSIRDAPFVRYVYEXXXXXXXXXXXXXSE------SSWPVIKDVLNE 241
+E + DS+ EIVK+I++APF++YVY S+ + W ++ L+
Sbjct: 60 VERWVEDSVDEIVKNIQEAPFLQYVYNSKGRFGRSQRQKVSQDLLQNPNHWQSVRKSLST 119
Query: 242 SSPDCVILVQKVE 280
+PD VILVQK++
Sbjct: 120 HNPDGVILVQKLD 132
Score = 38.5 bits (88), Expect(2) = 3e-08
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +3
Query: 342 VVEGKSAGVSACYILKTTQVPSAGGRCTHFYIS 440
+V+ + A +ACY+LKTT VPS+ G CT + ++
Sbjct: 166 LVQARGARENACYLLKTTSVPSSAGICTRYCLT 198
>ref|XP_006855090.1| hypothetical protein AMTR_s00031p00169100 [Amborella trichopoda]
gi|548858819|gb|ERN16557.1| hypothetical protein
AMTR_s00031p00169100 [Amborella trichopoda]
Length = 265
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = +2
Query: 65 VSVEKLESLLFDSIAEIVKSIRDAPFVRYVYEXXXXXXXXXXXXXSESSWPVIKDVLNES 244
VS E L+ + DSI EIV++I APF+ YVY + SW I+ LNE
Sbjct: 112 VSCENLDQWMVDSIPEIVRNIGKAPFLIYVYSPMDEEGRWQEIVGID-SWNEIRRSLNER 170
Query: 245 SPDCVILVQKV 277
PD VILV+++
Sbjct: 171 GPDGVILVEEL 181
Score = 33.1 bits (74), Expect(2) = 2e-07
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 357 SAGVSACYILKTTQVPSAGGRCTHFYIS 440
S S CYIL+TT++ S G CTHF ++
Sbjct: 217 SCSSSRCYILETTRICSTVGFCTHFCLA 244