BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026415
         (742 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836833.1| hypothetical protein AMTR_s00099p00062060 [A...   129   1e-27
ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210...   125   2e-26
gb|EMJ27565.1| hypothetical protein PRUPE_ppa022484mg [Prunus pe...   124   2e-26
ref|XP_004291837.1| PREDICTED: uncharacterized protein LOC101312...   123   6e-26
ref|XP_002890605.1| RNase H domain-containing protein [Arabidops...   122   9e-26
ref|XP_003532034.1| PREDICTED: uncharacterized protein LOC100779...   122   1e-25
ref|XP_006602372.1| PREDICTED: uncharacterized protein LOC100809...   122   2e-25
ref|XP_006844813.1| hypothetical protein AMTR_s00058p00043110 [A...   122   2e-25
ref|XP_003573224.1| PREDICTED: uncharacterized protein LOC100841...   122   2e-25
ref|XP_006484311.1| PREDICTED: uncharacterized protein LOC102614...   121   2e-25
ref|XP_006384344.1| hypothetical protein POPTR_0004s13455g [Popu...   121   3e-25
ref|XP_002305325.1| RNase H domain-containing family protein [Po...   121   3e-25
ref|XP_006305014.1| hypothetical protein CARUB_v10009379mg, part...   120   4e-25
ref|XP_003563302.1| PREDICTED: uncharacterized protein LOC100831...   120   6e-25
ref|XP_006585969.1| PREDICTED: uncharacterized protein LOC100779...   119   1e-24
ref|XP_002312512.2| RNase H domain-containing family protein [Po...   119   1e-24
ref|XP_004509868.1| PREDICTED: uncharacterized protein LOC101503...   119   1e-24
gb|AFW61655.1| putative rnase H family protein [Zea mays]             118   2e-24
ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis ...   118   2e-24
ref|XP_006298236.1| hypothetical protein CARUB_v10014297mg [Caps...   117   4e-24

>ref|XP_006836833.1| hypothetical protein AMTR_s00099p00062060 [Amborella trichopoda]
           gi|548839397|gb|ERM99686.1| hypothetical protein
           AMTR_s00099p00062060 [Amborella trichopoda]
          Length = 415

 Score =  129 bits (323), Expect = 1e-27
 Identities = 87/251 (34%), Positives = 121/251 (48%), Gaps = 52/251 (20%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSASVKGFPGNEYKSFSTLTEAQEYL----------------- 504
           Y VRKG   G+++T D+C + V     N +K F    E ++YL                 
Sbjct: 90  YVVRKGNITGIYKTLDDCRSLVYDPSCNVFKGFCLQKEVEDYLTARGLKSPSFSVSSTDV 149

Query: 503 -----------------QGSQPFQNVQDNQGATS-------------KATNHTIHSVSSK 414
                            Q   P QN + N+  +S             KAT  +I+ + S 
Sbjct: 150 TDDFLGTLVPLGTAIPCQNQVPCQNQESNEQFSSTKVRSKKSKLKTLKATIASINDMESN 209

Query: 413 GEKRPSEKPVEYQPAHKEKK--VAAINDSDGCFG---HGKQRQPNVAHEGPYFLEFDGAS 249
            E+  S K    +   K  K  +A+IND++         KQ+   +  + P  LEFDG+S
Sbjct: 210 -EQFSSTKVRSKKSKLKTSKATIASINDTEAVDSPPVQKKQKLKKMKIKEPVLLEFDGSS 268

Query: 248 KGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQG 69
           KGNPGR GAG ++R  DG + C ++EG+GI TNNVAEYR++I G+K  L  G+  V VQG
Sbjct: 269 KGNPGRGGAGAILRTDDGRVICRMREGLGIVTNNVAEYRAVILGMKCALRKGVTQVQVQG 328

Query: 68  DSNLVCMQEYN 36
           DS LVCMQ  N
Sbjct: 329 DSKLVCMQIQN 339


>ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210930 [Cucumis sativus]
          Length = 373

 Score =  125 bits (313), Expect = 2e-26
 Identities = 85/219 (38%), Positives = 116/219 (52%), Gaps = 23/219 (10%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNV---- 477
           + VRKG  VGV++++ +C A    S+   P + +K  S   + +EYL  S   +N     
Sbjct: 94  FVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYL-ASVGLKNALYTI 152

Query: 476 ------QDNQGATSKATNH---TIHSVSSKGEKRPSEKPVE-YQPAHKEKKVAAINDSDG 327
                  D  G+ +  T H   T  +  + G+    ++  E   P +    V      D 
Sbjct: 153 KAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENVGSTVLTPTLKDP 212

Query: 326 CFGHGKQRQPNVAHE-----GPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVG 162
              H K     V+H         FLEFDGASKGNPG+AGAG V+R  DGS+ C L+EG+G
Sbjct: 213 TRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLG 272

Query: 161 IATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           IATNNVAEYR+++ GLK  L+ G   +HVQGDS LVCMQ
Sbjct: 273 IATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQ 311


>gb|EMJ27565.1| hypothetical protein PRUPE_ppa022484mg [Prunus persica]
          Length = 521

 Score =  124 bits (312), Expect = 2e-26
 Identities = 81/200 (40%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDEC----SASVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQDNQ 465
           Y VRKG  VGV++++ +C    S+S+   P + YK +S   E +EYL GS    N     
Sbjct: 92  YVVRKGDIVGVYKSFSDCQAQLSSSIFDPPVSVYKGYSLPKETEEYL-GSCGLTNAIYTI 150

Query: 464 GATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHGKQRQPNVAH 285
            A     +     +    ++      +   P  K  K+           H  Q  P    
Sbjct: 151 AAADLKDDIFGKLMHCPFQEVIGSPSIADDPLRKHVKI----------DHSTQSLP--LD 198

Query: 284 EGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSLIRGLKFC 105
            G   LEFDGASKGNPG AGAG V+R  DGSL C L EG+G+ TNNVAEYR+LI GLK+ 
Sbjct: 199 SGFCTLEFDGASKGNPGLAGAGAVLRADDGSLICKLHEGLGVRTNNVAEYRALILGLKYA 258

Query: 104 LENGIHTVHVQGDSNLVCMQ 45
           L+ G   + V+GDS LVCMQ
Sbjct: 259 LKKGFTKIRVKGDSKLVCMQ 278


>ref|XP_004291837.1| PREDICTED: uncharacterized protein LOC101312118 [Fragaria vesca
           subsp. vesca]
          Length = 356

 Score =  123 bits (309), Expect = 6e-26
 Identities = 84/215 (39%), Positives = 114/215 (53%), Gaps = 19/215 (8%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQDNQ 465
           Y VRKG  VGV+++  +C A    S+   P + YK +S   + ++YL  S   QN     
Sbjct: 80  YVVRKGNVVGVYKSLADCQAQQGSSICDPPVSVYKGYSMPKKDEQYL-ASCGLQNALYTI 138

Query: 464 GATSKATNHTIHSVSSKG------EKRPSEKPVEYQPAHKEKK--------VAAINDSDG 327
            A           V   G      E   S K    + +H+E +         A+++D+  
Sbjct: 139 SAADMKDELFGKLVDCPGLDPAAAEGETSGKTAAKKRSHQEVESENVEVIGAASVSDTPS 198

Query: 326 CFGHGKQRQPNVAHEGP-YFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATN 150
                K+ +  V   G    L+FDGASKGNPG AGAG V+R  DG+L C L+EG+G+ATN
Sbjct: 199 RKQAKKKAEVEVPPLGRGCTLQFDGASKGNPGTAGAGAVLRADDGTLICKLREGLGVATN 258

Query: 149 NVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           NVAEYR++I GLK+ LE G   + VQGDS LVCMQ
Sbjct: 259 NVAEYRAVILGLKYALEKGFSRIFVQGDSKLVCMQ 293


>ref|XP_002890605.1| RNase H domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336447|gb|EFH66864.1| RNase H
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 536

 Score =  122 bits (307), Expect = 9e-26
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 13/210 (6%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQG---SQPFQNVQ 474
           + VRKG  +G+++   +C A    SV   P + YK +S   + +EYL      +P  +++
Sbjct: 86  FVVRKGDVIGIYKDLSDCQAQVGSSVFDLPVSVYKGYSLPKDTEEYLSAVGLKKPLYSLR 145

Query: 473 ------DNQGATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHG 312
                 D  GA +        S + K  +  +    + +   K++  +A    D      
Sbjct: 146 ASDLKDDMFGALTPCLFQEPASCTVKVSEEEATSETKSKDNQKDQLPSASMSYDPLEKLA 205

Query: 311 KQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYR 132
           K  Q     +   F+EFDGASKGNPG +GA  V++  DGSL C L++G+GIATNN AEY 
Sbjct: 206 KLEQSADTSDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRLRQGLGIATNNAAEYH 265

Query: 131 SLIRGLKFCLENGIHTVHVQGDSNLVCMQE 42
           +LI GLK+ +E G   + V+GDS LVCMQ+
Sbjct: 266 ALILGLKYAIEKGYKKIKVKGDSKLVCMQK 295


>ref|XP_003532034.1| PREDICTED: uncharacterized protein LOC100779114 isoform X1 [Glycine
           max]
          Length = 356

 Score =  122 bits (306), Expect = 1e-25
 Identities = 80/224 (35%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQ--------- 492
           Y VRKG  VG++ +  +  A    SV   P + YK +S   + +EYL             
Sbjct: 85  YVVRKGDVVGIYNSLADSQAQVGSSVCNPPVSVYKGYSLSKDTEEYLVSHGLKNALYTIR 144

Query: 491 ---------------PFQNVQDNQGATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEK 357
                          PFQ     +G ++K     +    S G     EK +   P  K+ 
Sbjct: 145 ATDLKEDLFGMLVPCPFQEPSTKEGTSNK----DVSKQRSLGVLAQDEKVISEDPFRKQV 200

Query: 356 KVAAINDSDGCFGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNL 177
           K+     ++          P+ A     F+EFDGASKGNPG+AGAG ++R  DGSL C +
Sbjct: 201 KLEYAEVAEA---------PSHATR-TCFVEFDGASKGNPGKAGAGAILRANDGSLICRV 250

Query: 176 KEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           +EGVGIATNN AEYR++I G+K+ L+ G   + +QGDS LVCMQ
Sbjct: 251 REGVGIATNNAAEYRAMILGMKYALKKGFTGICIQGDSKLVCMQ 294


>ref|XP_006602372.1| PREDICTED: uncharacterized protein LOC100809644 isoform X2 [Glycine
           max]
          Length = 351

 Score =  122 bits (305), Expect = 2e-25
 Identities = 79/221 (35%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQDNQ 465
           Y VRKG  VG++ +  +  A    SV   P + +K +S   + +EYL  S   +N     
Sbjct: 80  YVVRKGDVVGIYNSLADSQAQVGSSVCNPPVSVFKGYSLSKDTEEYLV-SHGLKNALYTI 138

Query: 464 GATS---------------------KATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVA 348
            AT                        +N  +    S G     EK +   P  K+ K+ 
Sbjct: 139 RATDLKEDLFGMLVPCPLQEPSTKESTSNKDVSKKRSLGVLGQDEKVISEDPLRKQVKL- 197

Query: 347 AINDSDGCFGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEG 168
                     H    +  +      F+EFDGASKGNPG+AGAG ++R  DGSL C L+EG
Sbjct: 198 ---------DHAAVAEAPLHATQTCFVEFDGASKGNPGKAGAGAILRANDGSLICRLREG 248

Query: 167 VGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           VGIATNN AEYR++I G+K+ L+ G   + +QGDS LVCMQ
Sbjct: 249 VGIATNNAAEYRAMILGMKYALKKGFTGIRIQGDSKLVCMQ 289


>ref|XP_006844813.1| hypothetical protein AMTR_s00058p00043110 [Amborella trichopoda]
           gi|548847304|gb|ERN06488.1| hypothetical protein
           AMTR_s00058p00043110 [Amborella trichopoda]
          Length = 261

 Score =  122 bits (305), Expect = 2e-25
 Identities = 87/253 (34%), Positives = 117/253 (46%), Gaps = 43/253 (16%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQDNQ 465
           Y VRKG  +GV+++ ++C +    SV+      YK  S   E + YL             
Sbjct: 15  YVVRKGDMIGVYRSLEDCRSLIPSSVRDPSVTVYKGQSLSKELEAYL------------- 61

Query: 464 GATSKATNHTIHSVSSKG---EKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHGKQRQPN 294
               +   + ++S+SSK    E   S  P  +Q A      ++      C    K     
Sbjct: 62  --LYRGLKNAVYSISSKDASDELLGSLMPCNFQEAAGCTSFSSEQPLK-CSKLRKIGDAV 118

Query: 293 VAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSLIRGL 114
            +    Y LEFDGASKGNPG+ GAG ++R  DG + C L+EG+G+ TNNVAEYR+LI G+
Sbjct: 119 SSRPVTYLLEFDGASKGNPGKGGAGAIIRTEDGRVVCQLREGLGVVTNNVAEYRALILGM 178

Query: 113 KFCLENGIHTVHVQGDSNLVCMQ------------------------------------E 42
           KF L+ G   + VQGDS LVCMQ                                    E
Sbjct: 179 KFALKKGFDRIRVQGDSMLVCMQIQDIWKTKNKNIMDLSMEAKELKKKFTSFQINHVGRE 238

Query: 41  YNSGADALANEAL 3
           YNS ADALAN A+
Sbjct: 239 YNSEADALANAAI 251


>ref|XP_003573224.1| PREDICTED: uncharacterized protein LOC100841248 [Brachypodium
           distachyon]
          Length = 352

 Score =  122 bits (305), Expect = 2e-25
 Identities = 77/209 (36%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSASVKGF----PGNEYKSFSTLTEAQEYL--QGSQPFQNVQD 471
           Y VRKG  +G+++   +C A V       P   YK +S   E +E+L  +G +      +
Sbjct: 94  YVVRKGDVIGIYKNLADCQAQVSNSVCDPPVTVYKGYSLRKETEEHLAARGLKHAMYSIN 153

Query: 470 NQGATSKATNHTI-------HSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHG 312
           +  A  +  +  +          +S   KRP E  +E  P+ K  KVA            
Sbjct: 154 SADARDELFDDLVPCPFQQPDGTASSTLKRPQE--METGPSKKHPKVA------------ 199

Query: 311 KQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYR 132
            +++P   +     LEFDGA KGNPG++GAGVVVR PDGS+  +L+EG+GIATNN AEYR
Sbjct: 200 -EQEPLPDNHLSCILEFDGACKGNPGKSGAGVVVRRPDGSVIAHLREGLGIATNNAAEYR 258

Query: 131 SLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           +L+ GL++  + G   +  QGDS LVC Q
Sbjct: 259 ALLLGLRYAAKKGFKYIRAQGDSKLVCYQ 287


>ref|XP_006484311.1| PREDICTED: uncharacterized protein LOC102614852 [Citrus sinensis]
          Length = 558

 Score =  121 bits (304), Expect = 2e-25
 Identities = 85/213 (39%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
 Frame = -3

Query: 638 KLYAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQD 471
           + + VRKG  VGV++++ EC A    S+   P + YK  +     +EYL  S   +N   
Sbjct: 86  EFFVVRKGDLVGVYKSFTECQAQLGSSICHPPVSVYKGNALPKGTEEYL-ASHGLKNALY 144

Query: 470 NQGATSKATNH-------TIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHG 312
              A     +        T+   +SK  KRP + P+E +  ++    + +  +D    H 
Sbjct: 145 TIRAADLTEDLFGTLMPCTLQDPTSK--KRPQD-PIEPEIGYELGSTSVL--ADPLRKHV 199

Query: 311 KQRQPNVAHEGPY----FLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNV 144
           K      +    Y     +EFDGASKGNPG AGA  V+R  DGSL C L+EGVGIAT+NV
Sbjct: 200 KLDLDAESKAASYHRSCIIEFDGASKGNPGPAGAAAVLRTDDGSLICKLREGVGIATSNV 259

Query: 143 AEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           AEYR LI GLK+ LE G   + VQGDS LVCMQ
Sbjct: 260 AEYRGLILGLKYALEKGFSNIRVQGDSKLVCMQ 292


>ref|XP_006384344.1| hypothetical protein POPTR_0004s13455g [Populus trichocarpa]
           gi|550340934|gb|ERP62141.1| hypothetical protein
           POPTR_0004s13455g [Populus trichocarpa]
          Length = 248

 Score =  121 bits (303), Expect = 3e-25
 Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDEC-----SASVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQDN 468
           Y VRKG  +GV+  + +C     S+SV     + +K +    EA+EYL            
Sbjct: 9   YVVRKGDIIGVYNNFSDCQLQAQSSSVCNPSVSVFKGYGLPKEAKEYL------------ 56

Query: 467 QGATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHGKQRQPNVA 288
              +S   N+  +S+ +   +      +   P  +        + D  F   +  QP + 
Sbjct: 57  ---SSHGLNNAAYSIQAPDVQNDLFGKLLPCPFQEPASSFRAKELDNNFPPKRLPQP-LE 112

Query: 287 HEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSLIRGLKF 108
                 LEFDGASKGNPG AGAG V+R  DGS+ C L+EG+GIATNNVAEYR+++ GLK 
Sbjct: 113 SIPSCILEFDGASKGNPGPAGAGAVLRAEDGSMVCRLREGLGIATNNVAEYRAVLLGLKH 172

Query: 107 CLENGIHTVHVQGDSNLVCMQ 45
            L+ G   + VQGDSNLVCMQ
Sbjct: 173 ALKKGFKYICVQGDSNLVCMQ 193


>ref|XP_002305325.1| RNase H domain-containing family protein [Populus trichocarpa]
           gi|222848289|gb|EEE85836.1| RNase H domain-containing
           family protein [Populus trichocarpa]
          Length = 257

 Score =  121 bits (303), Expect = 3e-25
 Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDEC-----SASVKGFPGNEYKSFSTLTEAQEYLQGSQPFQNVQDN 468
           Y VRKG  +GV+  + +C     S+SV     + +K +    EA+EYL            
Sbjct: 9   YVVRKGDIIGVYNNFSDCQLQAQSSSVCNPSVSVFKGYGLPKEAKEYL------------ 56

Query: 467 QGATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHGKQRQPNVA 288
              +S   N+  +S+ +   +      +   P  +        + D  F   +  QP + 
Sbjct: 57  ---SSHGLNNAAYSIQAPDVQNDLFGKLLPCPFQEPASSFRAKELDNNFPPKRLPQP-LE 112

Query: 287 HEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSLIRGLKF 108
                 LEFDGASKGNPG AGAG V+R  DGS+ C L+EG+GIATNNVAEYR+++ GLK 
Sbjct: 113 SIPSCILEFDGASKGNPGPAGAGAVLRAEDGSMVCRLREGLGIATNNVAEYRAVLLGLKH 172

Query: 107 CLENGIHTVHVQGDSNLVCMQ 45
            L+ G   + VQGDSNLVCMQ
Sbjct: 173 ALKKGFKYICVQGDSNLVCMQ 193


>ref|XP_006305014.1| hypothetical protein CARUB_v10009379mg, partial [Capsella rubella]
           gi|482573725|gb|EOA37912.1| hypothetical protein
           CARUB_v10009379mg, partial [Capsella rubella]
          Length = 393

 Score =  120 bits (302), Expect = 4e-25
 Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 20/226 (8%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSASVKGF----PGNEYKSFSTLTEAQEYLQG---SQPFQNVQ 474
           + VRKG  +G+++   +C A V       P + YK +S   EA+EYL      +P  +++
Sbjct: 130 FVVRKGDVIGIYKDLSDCQAQVGSSVFDPPVSVYKGYSLPKEAEEYLSSVGLKKPLYSIR 189

Query: 473 ------DNQGATS----KATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGC 324
                 D  GA +    +  N T+    +  E +  +K ++Y       K+  +  +   
Sbjct: 190 ASDLKDDMFGALTPCLFQEPNVTVSEERNTLEMKSKDKTIDY-------KIDPLPSAS-- 240

Query: 323 FGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNV 144
                +   N + E   F+EFDGASKGNPG +GA  V++  DGSL C L++G+GIATNN 
Sbjct: 241 MSGPLEMIGNNSPEETCFIEFDGASKGNPGLSGAAAVLKNEDGSLICKLRQGLGIATNNK 300

Query: 143 AEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ---EYNSGADALA 15
           AEY +LI GLK+ +E G   + V+GDS LVCMQ   ++N   + LA
Sbjct: 301 AEYHALILGLKYAVEKGYKKIKVKGDSKLVCMQIKGQWNVNNEVLA 346


>ref|XP_003563302.1| PREDICTED: uncharacterized protein LOC100831320 [Brachypodium
           distachyon]
          Length = 349

 Score =  120 bits (300), Expect = 6e-25
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSASVKGF----PGNEYKSFSTLTEAQEYLQGSQPFQNVQDNQ 465
           Y VRKG  +G+++   +C A V       P   YK +S   E +EYL             
Sbjct: 91  YVVRKGDVIGIYKNLADCQAQVSNSVCDPPVTVYKGYSLRKETEEYL------------- 137

Query: 464 GATSKATNHTIHSVSSKGEKR---------PSEKPVEYQPAHKEKKVAAINDSDGCFGHG 312
              ++   H ++S+++   +          P ++P     +  ++      +       G
Sbjct: 138 --AARGLKHALYSINAADARDELFDDLVPCPFQQPDGTTTSTLKRPQEMETEQPKKHPKG 195

Query: 311 KQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYR 132
            +++P         LEFDGA KGNPG++GAGVVVR PDGS+   L+EG+GIATNN AEYR
Sbjct: 196 AEQEPLPNSHLSCILEFDGACKGNPGKSGAGVVVRRPDGSVIAQLREGLGIATNNAAEYR 255

Query: 131 SLIRGLKFCLENGIHTVHVQGDSNLVCMQEYN 36
           +L+ GL++    G   +  QGDS LVC Q  N
Sbjct: 256 ALLLGLRYAANKGFKYIRAQGDSKLVCNQVQN 287


>ref|XP_006585969.1| PREDICTED: uncharacterized protein LOC100779114 isoform X2 [Glycine
           max]
          Length = 357

 Score =  119 bits (298), Expect = 1e-24
 Identities = 80/226 (35%), Positives = 113/226 (50%), Gaps = 30/226 (13%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQ--------- 492
           Y VRKG  VG++ +  +  A    SV   P + YK +S   + +EYL             
Sbjct: 85  YVVRKGDVVGIYNSLADSQAQVGSSVCNPPVSVYKGYSLSKDTEEYLVSHGLKNALYTIR 144

Query: 491 ---------------PFQNVQDNQGATSK--ATNHTIHSVSSKGEKRPSEKPVEYQPAHK 363
                          PFQ     +G ++K  +   ++  ++   +K  SE P   Q   +
Sbjct: 145 ATDLKEDLFGMLVPCPFQEPSTKEGTSNKDVSKQRSLGVLAQDEQKVISEDPFRKQVKLE 204

Query: 362 EKKVAAINDSDGCFGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFC 183
             +VA                P+ A     F+EFDGASKGNPG+AGAG ++R  DGSL C
Sbjct: 205 YAEVA--------------EAPSHATR-TCFVEFDGASKGNPGKAGAGAILRANDGSLIC 249

Query: 182 NLKEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
            ++EGVGIATNN AEYR++I G+K+ L+ G   + +QGDS LVCMQ
Sbjct: 250 RVREGVGIATNNAAEYRAMILGMKYALKKGFTGICIQGDSKLVCMQ 295


>ref|XP_002312512.2| RNase H domain-containing family protein [Populus trichocarpa]
           gi|550333081|gb|EEE89879.2| RNase H domain-containing
           family protein [Populus trichocarpa]
          Length = 317

 Score =  119 bits (298), Expect = 1e-24
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 51/247 (20%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYL--QGSQ------- 492
           + VRKG  VGV++ + +C A    S+   P + YKS+S   +++ YL   G Q       
Sbjct: 9   FVVRKGGVVGVYKNFADCEAQLGTSILDPPVSVYKSYSLSKDSEAYLVSHGLQNALYTIR 68

Query: 491 ---------------PFQNVQDNQGAT-----SKATNHTI-----------HSVSSKGEK 405
                          PFQ    +   T     +K  +  I            S++ K  K
Sbjct: 69  AADLKEDLFGTLIPCPFQQPASSNAETCPNDANKKRSQEILGSEIKGIDGSASITRKHTK 128

Query: 404 RPSEKPVEYQPAHKEKKVAAIND-----SDGCFG--HGKQRQPNVAHEGPYFLEFDGASK 246
              +   + Q ++  +    ++D     S   F   HG ++      +    LEFDGASK
Sbjct: 129 LDIQAECQAQSSNSVRGCKTMDDQLVKTSKYLFLCIHGAKKTLIFYSQKSCLLEFDGASK 188

Query: 245 GNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGD 66
           GNPG+AGAG V+R  DGSL C L+EG+GIATNN+AEYR+++ G+K+ LE G   +HV+GD
Sbjct: 189 GNPGQAGAGAVLRNDDGSLICRLREGLGIATNNMAEYRAILLGMKYALEKGYTKIHVKGD 248

Query: 65  SNLVCMQ 45
           S LVCMQ
Sbjct: 249 SKLVCMQ 255


>ref|XP_004509868.1| PREDICTED: uncharacterized protein LOC101503342 [Cicer arietinum]
          Length = 373

 Score =  119 bits (297), Expect = 1e-24
 Identities = 77/228 (33%), Positives = 109/228 (47%), Gaps = 32/228 (14%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSASVKGF----PGNEYKSFSTLTEAQEYLQGSQ--------- 492
           Y VRKG  VG++ +  +  A V       P + YK +S   E +EYL             
Sbjct: 93  YVVRKGDVVGIYNSLSDSQAQVGSSVCDPPVSVYKGYSLSKETEEYLLSHGLKDALYTIR 152

Query: 491 ---------------PFQNVQDNQGATSKATNHTIHSVSSKGE----KRPSEKPVEYQPA 369
                          PFQ+   ++GATS        ++    +    K      +   P 
Sbjct: 153 ASDLTEDLFGTLAPCPFQDPSSSKGATSNVDTSKKRALEVLEQDNVPKVTGSTSLSEDPL 212

Query: 368 HKEKKVAAINDSDGCFGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSL 189
            K+ K+           H    + +        +EFDGASKGNPGRAGAG ++R  DG+L
Sbjct: 213 RKQVKL----------DHAVVAKASSLANKTCIVEFDGASKGNPGRAGAGAILRSKDGNL 262

Query: 188 FCNLKEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
              ++EGVGIATNNVAEYR++I G+K+ L+ G  ++ +QGDS LVCMQ
Sbjct: 263 IYRVREGVGIATNNVAEYRAMILGMKYALKKGFTSISIQGDSKLVCMQ 310


>gb|AFW61655.1| putative rnase H family protein [Zea mays]
          Length = 262

 Score =  118 bits (295), Expect = 2e-24
 Identities = 73/207 (35%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
 Frame = -3

Query: 653 SRMAPKLYAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQGSQPF 486
           S +    Y VRKG  +G+++T  EC A    SV+      +K +S   + +EYL  ++  
Sbjct: 4   SSVGEPFYVVRKGDVIGIYKTLSECQAQVSNSVRDPSVTVFKGYSLRKDTEEYL-AARGL 62

Query: 485 QNVQDNQGATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEKKVAAINDSDGCFGHGKQ 306
           +N             + I +  ++ E      P  +Q              +   G  K 
Sbjct: 63  RNAL-----------YAIDATDARDELFDDLVPCPFQQPDGAASSTLKRSQEIEIGPSK- 110

Query: 305 RQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFCNLKEGVGIATNNVAEYRSL 126
           + P V  +    LEFDGASKGNPG+AGAG ++R  DGS+   L+EG+GIATNN AEYR+L
Sbjct: 111 KHPKVDEQLSCILEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRAL 170

Query: 125 IRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           I GL +  + G   +  QGDS LVC Q
Sbjct: 171 ILGLTYAAKKGFKYIRAQGDSKLVCNQ 197


>ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|332192355|gb|AEE30476.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 353

 Score =  118 bits (295), Expect = 2e-24
 Identities = 77/226 (34%), Positives = 112/226 (49%), Gaps = 30/226 (13%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECSA----SVKGFPGNEYKSFSTLTEAQEYLQG---SQPFQNVQ 474
           + VRKG  +G+++   +C A    SV   P + YK +S   + +EYL      +P  +++
Sbjct: 85  FVVRKGDVIGIYKDLSDCQAQVGSSVFDLPVSVYKGYSLPKDTEEYLSSVGLKKPLYSLR 144

Query: 473 ------DNQGATSK-------------ATNHTIHSVSSKGEKRPS--EKPVEYQPAHKEK 357
                 D  GA +              + + T     SK +K+       + Y P  K  
Sbjct: 145 ASDLKDDMFGALTPCLFQEPAPCTVKVSEDETTSETKSKDDKKDQLPSASISYDPLEKLS 204

Query: 356 KV--AAINDSDGCFGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGSLFC 183
           KV  +A    + CF                 +EFDGASKGNPG +GA  V++  DGSL C
Sbjct: 205 KVEPSAYISDETCF-----------------IEFDGASKGNPGLSGAAAVLKTEDGSLIC 247

Query: 182 NLKEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
            +++G+GIATNN AEY +LI GLK+ +E G   + V+GDS LVCMQ
Sbjct: 248 RVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQ 293


>ref|XP_006298236.1| hypothetical protein CARUB_v10014297mg [Capsella rubella]
           gi|482566945|gb|EOA31134.1| hypothetical protein
           CARUB_v10014297mg [Capsella rubella]
          Length = 292

 Score =  117 bits (293), Expect = 4e-24
 Identities = 85/229 (37%), Positives = 117/229 (51%), Gaps = 33/229 (14%)
 Frame = -3

Query: 632 YAVRKGRSVGVFQTWDECS----ASVKGFPGNEYKSFSTLTEAQE--------------- 510
           Y VRKG  +GV+++  EC     +SV   P + YK +S    A++               
Sbjct: 9   YIVRKGDIIGVYRSLSECQEQAGSSVSDPPMSVYKGYSWPKGAEDLFSSFGIKNALFSVN 68

Query: 509 --YLQGSQ-------PFQNVQDNQGATSKATNHTIHSVSSKGEKRPSEKPVEYQPAHKEK 357
             Y++          P Q     QG TS  ++      + + +   S++   + P+  +K
Sbjct: 69  ASYVKDDAFGKLIPCPVQQPSSCQGGTSNKSS----PAAKRLQGMRSDESGSFSPSPPQK 124

Query: 356 KVAAINDS-----DGCFGHGKQRQPNVAHEGPYFLEFDGASKGNPGRAGAGVVVRYPDGS 192
            +   ND         F     RQP + ++    +EFDGASKGNPG+AGAG V+R  D S
Sbjct: 125 HLKIENDIVYRTIPSSF---LTRQPILENDS-CTIEFDGASKGNPGKAGAGAVLRASDKS 180

Query: 191 LFCNLKEGVGIATNNVAEYRSLIRGLKFCLENGIHTVHVQGDSNLVCMQ 45
           +   L+EGVGIATNNVAEYR+LI GLK  L+ G   VHVQGDS LVCMQ
Sbjct: 181 VLFYLREGVGIATNNVAEYRALILGLKSALDKGFKNVHVQGDSMLVCMQ 229