BLASTX nr result
ID: Ephedra28_contig00026409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00026409
(464 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus pe... 121 1e-25
ref|XP_006491705.1| PREDICTED: putative pentatricopeptide repeat... 120 1e-25
ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citr... 120 1e-25
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi... 120 1e-25
emb|CBI21484.3| unnamed protein product [Vitis vinifera] 120 1e-25
emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum] 120 2e-25
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S... 119 3e-25
ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [S... 119 3e-25
gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indi... 119 3e-25
ref|XP_002310592.2| pentatricopeptide repeat-containing family p... 119 4e-25
gb|EMJ17597.1| hypothetical protein PRUPE_ppa022530mg [Prunus pe... 119 4e-25
ref|XP_004981586.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25
dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare] 119 5e-25
gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indi... 119 5e-25
ref|XP_006651864.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_004959556.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_004508953.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea m... 118 7e-25
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr... 118 7e-25
>gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus persica]
Length = 689
Score = 121 bits (303), Expect = 1e-25
Identities = 53/71 (74%), Positives = 62/71 (87%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S HSE+LA+AFGL+ LPLGATIR+ KNLR+CGDCHTAIKF+S++V RDIIVRD RFHHF
Sbjct: 619 STHSEKLAVAFGLMKLPLGATIRVFKNLRICGDCHTAIKFMSRVVGRDIIVRDAKRFHHF 678
Query: 284 SNGLCSCQDYW 252
NG CSC +YW
Sbjct: 679 RNGECSCGNYW 689
>ref|XP_006491705.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like isoform X1 [Citrus sinensis]
gi|568877358|ref|XP_006491706.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g23330-like isoform X2 [Citrus sinensis]
Length = 783
Score = 120 bits (302), Expect = 1e-25
Identities = 55/70 (78%), Positives = 60/70 (85%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSERLAI FG+I P G TIRI+KNLRVCGDCHTAIKFISKIV+R+IIVRD RFHHF
Sbjct: 714 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 773
Query: 281 NGLCSCQDYW 252
+G CSC DYW
Sbjct: 774 DGKCSCGDYW 783
>ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citrus clementina]
gi|557530418|gb|ESR41601.1| hypothetical protein
CICLE_v10013800mg [Citrus clementina]
Length = 680
Score = 120 bits (302), Expect = 1e-25
Identities = 55/70 (78%), Positives = 60/70 (85%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSERLAI FG+I P G TIRI+KNLRVCGDCHTAIKFISKIV+R+IIVRD RFHHF
Sbjct: 611 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 670
Query: 281 NGLCSCQDYW 252
+G CSC DYW
Sbjct: 671 DGKCSCGDYW 680
>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 120 bits (302), Expect = 1e-25
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S+HSE+LAIAFGLI P T+RIMKNLRVC DCH+AIKFISK+V R+IIVRD RFHHF
Sbjct: 715 SHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHF 774
Query: 284 SNGLCSCQDYW 252
NGLCSC+DYW
Sbjct: 775 KNGLCSCRDYW 785
>emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 120 bits (302), Expect = 1e-25
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S+HSE+LAIAFGLI P T+RIMKNLRVC DCH+AIKFISK+V R+IIVRD RFHHF
Sbjct: 520 SHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHF 579
Query: 284 SNGLCSCQDYW 252
NGLCSC+DYW
Sbjct: 580 KNGLCSCRDYW 590
>emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 120 bits (301), Expect = 2e-25
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSE++A+AF LI +P GATIRIMKN+R+CGDCH+A K+ISK+ ER+I+VRD RFHHFS
Sbjct: 555 YHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFS 614
Query: 281 NGLCSCQDYW 252
NG CSC DYW
Sbjct: 615 NGSCSCGDYW 624
>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein
SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 119 bits (299), Expect = 3e-25
Identities = 51/70 (72%), Positives = 60/70 (85%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSERLA+AFG+I+ P GA I++ KNLR+CGDCHT IK ISKIV+R+IIVRD RFHHF
Sbjct: 566 YHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFK 625
Query: 281 NGLCSCQDYW 252
NG CSC+DYW
Sbjct: 626 NGSCSCRDYW 635
>ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein
SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 119 bits (299), Expect = 3e-25
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S HSE+LAIAFGLIS P T+RIMKNLRVC DCHTAIKFISK+V+R+IIVRD RFHHF
Sbjct: 733 SRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHF 792
Query: 284 SNGLCSCQDYW 252
+G CSC+DYW
Sbjct: 793 RDGYCSCKDYW 803
>gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 119 bits (299), Expect = 3e-25
Identities = 49/70 (70%), Positives = 63/70 (90%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSE++A+AF LI++PLGATIRIMKN+R+CGDCH+A ++ISK+ ER+I+VRD RFHHFS
Sbjct: 444 YHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHFS 503
Query: 281 NGLCSCQDYW 252
+G CSC DYW
Sbjct: 504 SGSCSCGDYW 513
>ref|XP_002310592.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334248|gb|EEE91042.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 119 bits (298), Expect = 4e-25
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSE+LAIAFG+IS P T+RIMKNLRVC DCH AIKFISK+V+R+IIVRD RFHHF
Sbjct: 716 YHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFK 775
Query: 281 NGLCSCQDYW 252
+G CSC+DYW
Sbjct: 776 DGSCSCKDYW 785
>gb|EMJ17597.1| hypothetical protein PRUPE_ppa022530mg [Prunus persica]
Length = 689
Score = 119 bits (298), Expect = 4e-25
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S HSE+LA+AFGL+ LPLGATIR+ KNLR CGDCHTAIKF+S++V RDIIVRD RFHHF
Sbjct: 619 STHSEKLAVAFGLMKLPLGATIRVFKNLRSCGDCHTAIKFMSRVVGRDIIVRDAKRFHHF 678
Query: 284 SNGLCSCQDYW 252
NG CSC +YW
Sbjct: 679 RNGECSCGNYW 689
>ref|XP_004981586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Setaria italica]
Length = 803
Score = 119 bits (297), Expect = 5e-25
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S HSE+LAIAFGLIS P T+RIMKNLRVC DCH AIKFISK+VER+IIVRD RFHHF
Sbjct: 733 SRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHMAIKFISKVVEREIIVRDATRFHHF 792
Query: 284 SNGLCSCQDYW 252
+G CSC+DYW
Sbjct: 793 RDGFCSCKDYW 803
>dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 119 bits (297), Expect = 5e-25
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSE+LA+AF LI +P GATIRIMKN+R+CGDCH+A K+ISK+ R+I+VRD RFHHFS
Sbjct: 555 YHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFS 614
Query: 281 NGLCSCQDYW 252
NG CSC DYW
Sbjct: 615 NGSCSCADYW 624
>gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 119 bits (297), Expect = 5e-25
Identities = 50/70 (71%), Positives = 62/70 (88%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSERLA+AFG+I+ P G+ I++ KNLR+CGDCHTAIK IS+IV+RDIIVRD RFHHF
Sbjct: 634 YHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHTAIKLISQIVQRDIIVRDSNRFHHFK 693
Query: 281 NGLCSCQDYW 252
+G+CSC+DYW
Sbjct: 694 DGICSCRDYW 703
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRD 306
YHSERLA+AFG+I+ P G+ I++ KNLR+CGDCH AIK IS+IV+RDIIVRD
Sbjct: 572 YHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRD 623
>ref|XP_006651864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like, partial [Oryza brachyantha]
Length = 761
Score = 118 bits (296), Expect = 7e-25
Identities = 52/71 (73%), Positives = 61/71 (85%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S HSE+LAIAFGLIS P T+RIMKNLRVC DCHTAIKF+S++ +R+IIVRD RFHHF
Sbjct: 691 SRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFVSRVTDREIIVRDATRFHHF 750
Query: 284 SNGLCSCQDYW 252
+GLCSC+DYW
Sbjct: 751 RDGLCSCKDYW 761
>ref|XP_004959556.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Setaria italica]
Length = 628
Score = 118 bits (296), Expect = 7e-25
Identities = 49/70 (70%), Positives = 61/70 (87%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
YHSE++A+AF LI++P GA IRIMKN+R+CGDCH+A K++SK+ ER+IIVRD RFHHFS
Sbjct: 559 YHSEKIALAFALINMPAGAMIRIMKNIRICGDCHSAFKYVSKVFEREIIVRDTNRFHHFS 618
Query: 281 NGLCSCQDYW 252
NG CSC DYW
Sbjct: 619 NGSCSCGDYW 628
>ref|XP_004508953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cicer arietinum]
Length = 637
Score = 118 bits (296), Expect = 7e-25
Identities = 51/70 (72%), Positives = 60/70 (85%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
+HSE+LAIAFGL+ +PLG IR+ KNLRVCGDCH+AIK+IS I ER+IIVRD RFHHF
Sbjct: 568 WHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSAIKYISAIEEREIIVRDTTRFHHFK 627
Query: 281 NGLCSCQDYW 252
+GLCSC DYW
Sbjct: 628 DGLCSCSDYW 637
>ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
[Fragaria vesca subsp. vesca]
Length = 1013
Score = 118 bits (296), Expect = 7e-25
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = -1
Query: 461 YHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHFS 282
+HSE+LAIAFGLI+ P +T+RIMKNLRVC DCHTAIKFISK+V R+II+RD RFHHF
Sbjct: 944 HHSEKLAIAFGLINTPDNSTLRIMKNLRVCNDCHTAIKFISKLVGREIILRDTTRFHHFK 1003
Query: 281 NGLCSCQDYW 252
NG CSC+DYW
Sbjct: 1004 NGTCSCRDYW 1013
>tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 118 bits (296), Expect = 7e-25
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
S HSE+LAIAFGLIS P T+RIMKNLRVC DCHTAIKFISK V+R+IIVRD RFHHF
Sbjct: 917 SRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHF 976
Query: 284 SNGLCSCQDYW 252
+G CSC+DYW
Sbjct: 977 RDGYCSCKDYW 987
>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 118 bits (296), Expect = 7e-25
Identities = 52/71 (73%), Positives = 60/71 (84%)
Frame = -1
Query: 464 SYHSERLAIAFGLISLPLGATIRIMKNLRVCGDCHTAIKFISKIVERDIIVRDPVRFHHF 285
SYHSE+LAIA+G++SLP GA IRI KNLRVCGDCH+A KFISK+ R+II RD RFHHF
Sbjct: 767 SYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHF 826
Query: 284 SNGLCSCQDYW 252
NG+CSC DYW
Sbjct: 827 KNGVCSCGDYW 837