BLASTX nr result

ID: Ephedra28_contig00026374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026374
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18035.1| unknown [Picea sitchensis]                             133   3e-29
ref|XP_001781331.1| predicted protein [Physcomitrella patens] gi...    65   7e-09

>gb|ABR18035.1| unknown [Picea sitchensis]
          Length = 466

 Score =  133 bits (334), Expect = 3e-29
 Identities = 65/131 (49%), Positives = 91/131 (69%)
 Frame = +3

Query: 15  MGKGRNQKNRSNDKKHANMHQEESFLTEARKLKQQAERKANGPERIPALERCCHLYNQSL 194
           MG+GRN+K  S+ +        ES LTEA KLKQQAERK+NGPER+P LE+C  L+  +L
Sbjct: 1   MGRGRNRKGNSSSR-------HESILTEASKLKQQAERKSNGPERVPLLEKCSQLFQNAL 53

Query: 195 TMPLPPSEKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTAKKNPVVESKLETLISAA 374
             PL   +KE+ LFDLGE ++LWS+AV+KG  + +  AFK   KK+  ++ +LE  + AA
Sbjct: 54  QFPLSLRDKEEALFDLGEAFLLWSSAVRKGPCLGNHSAFKGNIKKHHAIQLQLEASLYAA 113

Query: 375 DLCRKSTEAYK 407
           +LCR+S E+Y+
Sbjct: 114 NLCRQSVESYR 124


>ref|XP_001781331.1| predicted protein [Physcomitrella patens]
           gi|162667224|gb|EDQ53859.1| predicted protein
           [Physcomitrella patens]
          Length = 221

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 40/131 (30%), Positives = 66/131 (50%)
 Frame = +3

Query: 15  MGKGRNQKNRSNDKKHANMHQEESFLTEARKLKQQAERKANGPERIPALERCCHLYNQSL 194
           M   R    RS+          ES L EAR++KQ AERK +G  ++ +LE+   L+  +L
Sbjct: 1   MAPKRRPSARSSRNAPPPATSAESLLAEARRVKQAAERKLDGAAKVGSLEQAVLLFQNAL 60

Query: 195 TMPLPPSEKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTAKKNPVVESKLETLISAA 374
           +M L    +E+ LFDLGE ++  + A++          F+   KK   +E + +  + A+
Sbjct: 61  SMRLSLPVQEEALFDLGETFLEMAGALQTRGLHLAGSPFRNEKKKAQALEIQSQASVDAS 120

Query: 375 DLCRKSTEAYK 407
              R+S E Y+
Sbjct: 121 SATRQSFEMYE 131


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