BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00026017
         (489 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis]      86   4e-15
ref|XP_006357376.1| PREDICTED: putative pentatricopeptide repeat...    86   7e-15
ref|XP_006368339.1| pentatricopeptide repeat-containing family p...    84   1e-14
ref|XP_004295549.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
gb|EMJ12073.1| hypothetical protein PRUPE_ppa003110mg [Prunus pe...    84   3e-14
ref|XP_004242268.1| PREDICTED: putative pentatricopeptide repeat...    83   4e-14
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...    83   4e-14
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    83   4e-14
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi...    82   7e-14
emb|CBI35966.3| unnamed protein product [Vitis vinifera]               82   7e-14
ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [A...    81   1e-13
ref|XP_004233728.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat...    80   3e-13
ref|XP_006828847.1| hypothetical protein AMTR_s00001p00155170 [A...    80   3e-13
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr...    80   4e-13
ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus...    79   5e-13
ref|XP_004300183.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_006485864.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13

>gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis]
          Length = 605

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = +2

Query: 5   LQMRLPSNLNLVQRCANIQQLQQIHARLC---INGEDKVVGPRLATRYV-DFGDIDXXXX 172
           L ++    L+L++RC ++++L+QIH ++    + G+    G  +AT  + D+G +D    
Sbjct: 27  LSLKEQECLSLLKRCKSVRELKQIHVQILKIGLLGDSFCAGNLVATCALSDWGSMDYACS 86

Query: 173 XXXXXXXXXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLD 349
                       +NT++R +   GN   A+ LY +M +SG  PD+F +  LLK    L  
Sbjct: 87  IFRHVKEPQTFLFNTMMRGHVKDGNWGQALILYFDMLKSGVEPDNFTYPVLLKACARLSA 146

Query: 350 LKLGQCIHLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
            + G  IH    K GL   LFV N L++MY KC +IE+AC VFD+M
Sbjct: 147 TEEGMQIHGHTSKLGLQGDLFVQNSLINMYGKCGKIELACAVFDQM 192


>ref|XP_006357376.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like isoform X1 [Solanum tuberosum]
           gi|565382079|ref|XP_006357377.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like isoform X2 [Solanum tuberosum]
           gi|565382081|ref|XP_006357378.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like isoform X3 [Solanum tuberosum]
          Length = 727

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
 Frame = +2

Query: 32  NLVQRCA-NIQQLQQIHARLCI--NGEDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXX 202
           +L+Q+C  N+QQL+QIH ++ I  +     +  RL + Y  FG I+              
Sbjct: 55  HLLQQCGLNLQQLKQIHEKIIITSSSNSSFIAARLISAYSKFGLINEAQKVFETCPTDCF 114

Query: 203 X----WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCI 370
                WN+I+R N   G  E A++LY +M+  G   D F F  +++   M  D  L   +
Sbjct: 115 SNLLLWNSILRANLSHGKCEEAVKLYVKMREYGNLADGFGFPLIIRACGMFGDHNLCSVV 174

Query: 371 HLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           H  AI+ G   HL+V N L++MY K  ++++A QVFD+M
Sbjct: 175 HSHAIQMGFRDHLYVGNELMNMYGKIGRMDIASQVFDRM 213


>ref|XP_006368339.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550346246|gb|ERP64908.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 602

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
 Frame = +2

Query: 5   LQMRLPSNLNLVQRCANIQQLQQIHARLCINGEDKVVGPRLATRYV--DFGDIDXXXXXX 178
           L+++    L+L++RC N+++ +Q+HA++ +  E+      L       D+G +D      
Sbjct: 27  LKLKEQECLSLMKRCKNMEEFKQVHAQV-LKWENSFCASNLVATCALSDWGSMDYACSIF 85

Query: 179 XXXXXXXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLK 355
                     +NT+IR    V N ENA+ LY EM   G   D+F + +L K    L  ++
Sbjct: 86  RQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIE 145

Query: 356 LGQCIHLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
            G  IH    K GL   LFV N L++MY KC +IE++C VF+ M
Sbjct: 146 EGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHM 189


>ref|XP_004295549.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 499

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
 Frame = +2

Query: 32  NLVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDI---DXXXXXXXXXXXX 196
           +L+Q+C N   ++++HA++  +G  ++  V  +L  +YV+  D    D            
Sbjct: 19  DLLQQCTNTNSIKKLHAQIIFSGLHQNPFVASKLVAKYVEQSDSSMEDARKVFDELTERD 78

Query: 197 XXXWNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHL 376
              WN +I+    VG    AI++ N M+ SG  P+ + +  +LK    + D K G+ +H 
Sbjct: 79  EFVWNVVIQGYANVGPFAEAIKMSNAMRVSGLPPNRYTYPFVLKACGAMRDGKQGKVVHG 138

Query: 377 QAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           Q +K+GL   +FV N L+++Y KC ++E++ +VF+++
Sbjct: 139 QIVKAGLELQVFVGNALVALYSKCGEVEVSRRVFEEL 175


>gb|EMJ12073.1| hypothetical protein PRUPE_ppa003110mg [Prunus persica]
          Length = 602

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
 Frame = +2

Query: 26  NLNLVQRCANIQQLQQIHARLCING---EDKVVGPRLATRYVD-FGDIDXXXXXXXXXXX 193
           +L+L++RC N+++L+Q+HA +   G   +    G  +AT  +  +G +D           
Sbjct: 34  SLSLLKRCRNMEELKQVHAHILKLGHFCDSFCAGNLVATSALSAWGSMDHACSIFQQINE 93

Query: 194 XXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCI 370
                 NT+I+ +    N + A+ LY EM  +G  PD+F +  LLK    LL ++ G  I
Sbjct: 94  PGTFVCNTMIKGHVKAMNWDKALLLYCEMLETGVEPDNFTYPVLLKACAWLLAIEEGMQI 153

Query: 371 HLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           H   +K GL   +FV N L+SMY KC ++E +C VF++M
Sbjct: 154 HGHILKLGLENDVFVQNSLISMYGKCGELERSCTVFEQM 192


>ref|XP_004242268.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Solanum lycopersicum]
          Length = 730

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
 Frame = +2

Query: 32  NLVQRCA-NIQQLQQIHARLCINGEDK--VVGPRLATRYVDFGDIDXXXXXXXXXXXXXX 202
           +L+Q+C  N+QQL+QIH  + I G      +  RL + Y  FG ++              
Sbjct: 55  HLLQQCGLNLQQLKQIHENIIITGSSNSSFIAARLISVYSKFGLVNEAQKVFETCPTDCF 114

Query: 203 X----WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCI 370
                WN+I+R N   G  E A++LY +M+  G   D F F  +++   M  D  L   +
Sbjct: 115 SNLLLWNSILRANVSHGKCEEAVKLYVKMREYGNLADGFGFPLIIRACGMFGDHNLCSVV 174

Query: 371 HLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           H  AI+ G   HL+V N L++MY K  ++++A +VFD M
Sbjct: 175 HCHAIQMGFRDHLYVGNELMNMYGKIGRMDIASKVFDGM 213


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
 Frame = +2

Query: 11  MRLPSNLNLVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDIDXXXXXXXX 184
           +R    L L+Q C N + L+QIHA++  +G   D+++  +L   Y   G I         
Sbjct: 25  IRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQ 84

Query: 185 XXXXXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLG 361
                   WN IIR N I G  E A+ LY  M   G   D F F  ++K     L + LG
Sbjct: 85  IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG 144

Query: 362 QCIHLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           + +H   IK G    +FV N L+  Y KC     A +VF+KM
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 206  WNTIIRTNNIVGNHENAIELYNEMQRS-GTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQA 382
            WN++I      G    A+E+++ M R  G R ++   +++L        L+ G+CIH Q 
Sbjct: 1320 WNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV 1379

Query: 383  IKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
            IK  L  ++ V   ++ MYCKC ++EMA + FD+M
Sbjct: 1380 IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/94 (31%), Positives = 49/94 (52%)
 Frame = +2

Query: 206  WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
            WN++I      G+   A+  ++ +++ G  P    F   +K    L DL  G+  H QA 
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169

Query: 386  KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
              G  T LFV++ L+ MY KC Q++ A  +FD++
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 1203


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
 Frame = +2

Query: 11  MRLPSNLNLVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDIDXXXXXXXX 184
           +R    L L+Q C N + L+QIHA++  +G   D+++  +L   Y   G I         
Sbjct: 25  IRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQ 84

Query: 185 XXXXXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLG 361
                   WN IIR N I G  E A+ LY  M   G   D F F  ++K     L + LG
Sbjct: 85  IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG 144

Query: 362 QCIHLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           + +H   IK G    +FV N L+  Y KC     A +VF+KM
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 206  WNTIIRTNNIVGNHENAIELYNEMQRS-GTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQA 382
            WN++I      G    A+E+++ M R  G R ++   +++L        L+ G+CIH Q 
Sbjct: 2193 WNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV 2252

Query: 383  IKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
            IK  L  ++ V   ++ MYCKC ++EMA + FD+M
Sbjct: 2253 IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/94 (31%), Positives = 49/94 (52%)
 Frame = +2

Query: 206  WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
            WN++I      G+   A+  ++ +++ G  P    F   +K    L DL  G+  H QA 
Sbjct: 1983 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 2042

Query: 386  KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
              G  T LFV++ L+ MY KC Q++ A  +FD++
Sbjct: 2043 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 2076


>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568829286|ref|XP_006468954.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568829288|ref|XP_006468955.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 435

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
 Frame = +2

Query: 29  LNLVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXX 202
           L L+++C N  QL+ IHA++  +G   D+++  +L      +G  D              
Sbjct: 34  LVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHV 93

Query: 203 X-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQ 379
             WN +IR   I G+ + A+ LYN M  +G RPD F F  ++K  V  L ++ G+ +H  
Sbjct: 94  FTWNLMIRALTINGSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKEVHGL 153

Query: 380 AIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           A+K+G    +FV N L+ +Y KC  ++    VFDKM
Sbjct: 154 AVKAGFSRDMFVQNTLMDLYFKCGDVDGGRMVFDKM 189



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/94 (36%), Positives = 47/94 (50%)
 Frame = +2

Query: 206 WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
           W  +I         + A EL+  M     RP+ F   SLL+    L  LKLG  IH  A+
Sbjct: 228 WTAMINAYVRNERAQEAFELFQRMLLDNVRPNEFTLVSLLQACTELRSLKLGNWIHDFAL 287

Query: 386 KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           K+G    +++   L+ MY KC  +E A +VFDKM
Sbjct: 288 KNGFVLGVYLGTALIDMYSKCGSLEDARKVFDKM 321


>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
 Frame = +2

Query: 29  LNLVQRCANIQQLQQIHARLCINGEDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXXX- 205
           L+L++   ++ Q+ QIHA+  I+G    +   L  + +D   ID                
Sbjct: 3   LSLLRTATSLTQIHQIHAQTLIHGLP--LQTHLIPKLIDLHSIDYARFVLDQTPSPTDFS 60

Query: 206 WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
           WN++IR   + G+ +N++ LY +M RS T+P +F F  +LK    L  +  G+ IH   +
Sbjct: 61  WNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVL 120

Query: 386 KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           + G  + LFV N L+ MYCKC +++ A   +D M
Sbjct: 121 RLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDM 154



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/93 (34%), Positives = 50/93 (53%)
 Frame = +2

Query: 206 WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
           WN II      G  E AI+LY  M+    +P+     ++L     L  L+LG+ +HL   
Sbjct: 297 WNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLG 356

Query: 386 KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDK 484
           ++GL  ++ +A  L+ MY KC +I+ AC +F K
Sbjct: 357 RNGLDLNVILATALVDMYAKCGKIDDACLIFVK 389


>ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [Amborella trichopoda]
           gi|548837647|gb|ERM98332.1| hypothetical protein
           AMTR_s00170p00032020 [Amborella trichopoda]
          Length = 752

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
 Frame = +2

Query: 74  IHARLCING--EDKVVGPRLATRY-VDFGDIDXXXXXXXXXXXXXXXWNTIIRTNNIVGN 244
           IHA++ I G  +D  +  +L T Y      I                WN++IR   + G 
Sbjct: 67  IHAKILITGLGQDPFLACKLITFYSASKNVILSRLVFNGILEHNVFLWNSMIRGYVVNGF 126

Query: 245 HENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAIKSGLHTHLFVANV 424
           HE A+ L+   + +G +PDS+ F+ +LK   +L D   G+ +H    +SGL   LFV+N 
Sbjct: 127 HEQALALFYNKRAAGMKPDSYTFSCVLKACALLSDRNQGKVLHDLVRESGLEEDLFVSNS 186

Query: 425 LLSMYCKCHQIEMACQVFDKM 487
           LLSM+C+C + E A Q+F+KM
Sbjct: 187 LLSMFCRCGRFEHAIQLFNKM 207



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/94 (34%), Positives = 52/94 (55%)
 Frame = +2

Query: 206 WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
           W+T+I      G+H  AI  + +M  + T P+     S+L        LK G+ +HL A+
Sbjct: 448 WSTMIAGYAQNGHHNEAINTFRDMCNTKTTPNPITITSVLSAFAQTSSLKPGKELHLHAL 507

Query: 386 KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           K GL  H +V + L+ MY KC +IE + ++FD++
Sbjct: 508 KHGLSDHTYVGSALIDMYSKCGKIEESRRIFDRI 541


>ref|XP_004233728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Solanum lycopersicum]
          Length = 651

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
 Frame = +2

Query: 29  LNLVQRCANIQQLQQIHARLCINGEDKVVGP-----RLATRYVDFGDIDXXXXXXXXXXX 193
           ++L+  C+++ Q++Q+HA +   G D+         RL T+     D             
Sbjct: 46  VSLLDNCSSLNQIKQVHAHVIRRGLDQCCYVLAKLIRLLTKINVPMDPYPRLVFHQVEYR 105

Query: 194 XXXXWNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIH 373
               W  +IR  +I G  + A+ LYN M+R    P SF F +LLK     L+L LG+ IH
Sbjct: 106 NPFLWTALIRGYSIQGPLKEAVSLYNAMRRESISPVSFTFTALLKGSSDELELNLGRQIH 165

Query: 374 LQAIK-SGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
            Q+IK  G    LFV N+L+ MY KC  ++   +VFD+M
Sbjct: 166 CQSIKLGGFCEDLFVHNILIDMYVKCGWLDYGRKVFDEM 204


>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Citrus sinensis]
          Length = 741

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
 Frame = +2

Query: 29  LNLVQRCANIQQLQQIHARLCINGEDKVVGPRLATRYVDF-----GDIDXXXXXXXXXXX 193
           ++L++ C ++ QL+QIH++    G   +  P +  + V F     GD+            
Sbjct: 41  ISLIETCESMHQLKQIHSQTIKLG--LLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPR 98

Query: 194 XXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCI 370
                WNT+I+  + + +H+N + +Y +M +S  RPD++ F  LLK     + ++ G+ +
Sbjct: 99  PSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKEL 158

Query: 371 HLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFD 481
           H   +K G  + +FV N L+S YC C +++MA  +FD
Sbjct: 159 HCHVVKFGFDSSVFVQNALISTYCLCGEVDMARGIFD 195



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
 Frame = +2

Query: 92  INGEDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXXX-WNTIIRTNNIVGNHENAIELY 268
           I  +D +    + T Y++ G +D                W  +I     V     A+ L+
Sbjct: 298 IKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLF 357

Query: 269 NEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAIKSGLHTHLFVANVLLSMYCKC 448
            EMQ S  RPD F   S+L     L  L+LG+ +     K+ +   +FV N L+ MYCKC
Sbjct: 358 REMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKC 417

Query: 449 HQIEMACQVFDKM 487
             +E A +VF +M
Sbjct: 418 GDVEKAQRVFREM 430


>ref|XP_006828847.1| hypothetical protein AMTR_s00001p00155170 [Amborella trichopoda]
           gi|548833826|gb|ERM96263.1| hypothetical protein
           AMTR_s00001p00155170 [Amborella trichopoda]
          Length = 454

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
 Frame = +2

Query: 35  LVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDI--DXXXXXXXXXXXXXX 202
           L+Q C +I+ L+ +HA++   G   +  +  +L   Y DF     D              
Sbjct: 42  LLQSCRDIESLKAVHAQVVTAGYQSNMYLAAKLIEIYRDFSGSMEDGRKVFNNTTERDSQ 101

Query: 203 XWNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQA 382
            +N +IR     G++  AI  Y+EMQ  G +P+ F F  +LK    + DL+ G+ IH  +
Sbjct: 102 LYNVLIRGYTTHGSYMEAIRAYDEMQMQGLKPNHFSFPFVLKACSAMGDLEKGKEIHRDS 161

Query: 383 IKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           + +G++ H +V N L++MY +C  +  A QVFD+M
Sbjct: 162 MMAGMNGHTYVCNGLIAMYARCGDLTNARQVFDEM 196


>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
           gi|557549465|gb|ESR60094.1| hypothetical protein
           CICLE_v10018065mg [Citrus clementina]
          Length = 438

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
 Frame = +2

Query: 29  LNLVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXX 202
           L L+++C N  QL+ IHA++  +G   D+++  +L      +G  D              
Sbjct: 34  LVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHV 93

Query: 203 X-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQ 379
             WN +IR   I G+   A+ LYN M  +G RPD F F  + K  +  L ++ G+ +H  
Sbjct: 94  FTWNLMIRALTINGSSRQALLLYNLMICNGFRPDKFTFPFVFKACITSLAIEKGKEVHGL 153

Query: 380 AIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           A+K+G    +FV N L+ +Y KC  +    +VFDKM
Sbjct: 154 AVKAGFSRDMFVQNTLMDLYFKCGDVNGGRKVFDKM 189



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/81 (41%), Positives = 45/81 (55%)
 Frame = +2

Query: 245 HENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAIKSGLHTHLFVANV 424
           HE A EL+  M     RP+ F   SLL+    L  LKLG  IH  A+K+G    +++   
Sbjct: 242 HE-AFELFQRMLLDNVRPNEFTLVSLLQACTELGSLKLGNWIHDFALKNGFVLGVYLGTA 300

Query: 425 LLSMYCKCHQIEMACQVFDKM 487
           L+ MY KC  +E A +VFDKM
Sbjct: 301 LIDMYSKCGSLEDARKVFDKM 321


>ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            isoform X1 [Glycine max] gi|571439084|ref|XP_006574753.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g13650-like isoform X2 [Glycine max]
            gi|571439086|ref|XP_006574754.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g13650-like isoform X3 [Glycine max]
            gi|571439088|ref|XP_006574755.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g13650-like isoform X4 [Glycine max]
            gi|571439090|ref|XP_006574756.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g13650-like isoform X5 [Glycine max]
          Length = 1082

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
 Frame = +2

Query: 38   VQRCANIQQL---QQIHARLCING--EDKVVGPRLATRYVDFGDI-DXXXXXXXXXXXXX 199
            +  CA IQ L   QQIHA+ C++G  +D  VG  L + Y   G + D             
Sbjct: 616  ISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN 675

Query: 200  XXWNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQ 379
              WN++I      G+ E A+ L+++M ++G   +SF F   +     + ++KLG+ IH  
Sbjct: 676  ISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAM 735

Query: 380  AIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
             IK+G  +   V+NVL+++Y KC  I+ A + F +M
Sbjct: 736  IIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEM 771



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 26/94 (27%), Positives = 56/94 (59%)
 Frame = +2

Query: 206 WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
           WN ++    ++ N   + +++ +MQ  G  P+ F + S+L+    L  + LG+ IH Q +
Sbjct: 476 WNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVL 535

Query: 386 KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           K+G   +++V++VL+ MY K  +++ A ++F ++
Sbjct: 536 KTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRL 569


>gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus vulgaris]
          Length = 482

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
 Frame = +2

Query: 35  LVQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXXX- 205
           ++Q+C+N +QL+Q+H R+   G   D+++   L      +G ++                
Sbjct: 30  ILQKCSNFKQLKQVHGRIIRFGLIYDQLLMRNLIQLSSSYGKLNYATLVFDQLNAPDTFT 89

Query: 206 WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAI 385
           WN +IR N I G+ + A+ L+  M   G  PD F +  ++   V    L LG+  H  AI
Sbjct: 90  WNVMIRANTIGGSPKMALLLFKAMLSQGFAPDKFTYPFVISACVASNALDLGRLTHALAI 149

Query: 386 KSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           K G  + L+V   ++++Y KCH+++   +VFDKM
Sbjct: 150 KMGFWSDLYVQTNVMNLYFKCHEVDDGWKVFDKM 183


>ref|XP_004300183.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Fragaria vesca subsp. vesca]
          Length = 606

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
 Frame = +2

Query: 8   QMRLPSNLNLVQRCANIQQLQQIHA---RLCINGEDKVVGPRLATRYVD-FGDIDXXXXX 175
           +++   +L+L++RC N+++ +Q+H+   +L ++ +  V G  +AT  +  +G +D     
Sbjct: 29  RLKEQESLSLLKRCKNLEEFKQVHSHILKLGVSCDSFVAGNLVATNVLSAWGSMDYACSI 88

Query: 176 XXXXXXXXXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDL 352
                       NT+I+ +    N + A+ +Y EM  SG RPD+F +  +LK    L+ +
Sbjct: 89  FEQIEEPGSFVCNTMIKGHVKALNWDQALLVYCEMLESGVRPDNFTYPIVLKACAWLVAI 148

Query: 353 KLGQCIHLQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
           + G+ IH    K GL   +FV N L+SMY KC +++++  VF+++
Sbjct: 149 EEGKQIHGHVFKLGLENDVFVQNSLISMYGKCGKVQLSRSVFEQL 193


>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
           protein product [Vitis vinifera]
          Length = 605

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
 Frame = +2

Query: 29  LNLVQRCANIQQLQQIHARLC---INGEDKVVGPRLATRYV-DFGDIDXXXXXXXXXXXX 196
           ++L+++C+N+++ +Q HAR+    + G+       +AT  + D+G +D            
Sbjct: 35  VSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL 94

Query: 197 XXX-WNTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIH 373
               +NT++R +    N E A+  Y EM   G +PD+F + +LLK    L  ++ G  +H
Sbjct: 95  GSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154

Query: 374 LQAIKSGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
              +K GL   +FV N L+SMY KC +I + C VF++M
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQM 192


>ref|XP_006485864.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Citrus sinensis]
          Length = 583

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
 Frame = +2

Query: 38  VQRCANIQQLQQIHARLCING--EDKVVGPRLATRYVDFGDIDXXXXXXXXXXXXXXX-W 208
           +Q+C+++  +++ HA++ + G   D  +  ++A  YV F  +D                W
Sbjct: 20  LQKCSSLNTVKKSHAKIFVCGLQNDNNILNQIAIFYVQFKKLDTARLVFEYISNPSSYLW 79

Query: 209 NTIIRTNNIVGNHENAIELYNEMQRSGTRPDSFIFNSLLKIPVMLLDLKLGQCIHLQAIK 388
           N +IR     GN   ++ LY +M ++G +PD F F   LK    L +L++G+ +H   + 
Sbjct: 80  NILIREYATQGNFRQSLALYAKMMQNGFKPDKFAFPFALKSCAGLANLQIGKLVHQHLVC 139

Query: 389 SGLHTHLFVANVLLSMYCKCHQIEMACQVFDKM 487
            G    +FV   L++MY KC  +E A  VFDKM
Sbjct: 140 CGCDYDVFVNAALVNMYAKCGNVEDARVVFDKM 172