BLASTX nr result

ID: Ephedra28_contig00025976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025976
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi...    74   2e-11
ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi...    61   1e-07

>ref|XP_001775171.1| predicted protein [Physcomitrella patens]
           gi|162673510|gb|EDQ60032.1| predicted protein
           [Physcomitrella patens]
          Length = 1110

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
 Frame = -2

Query: 385 SARAVFEPFPPFLLKEKEIRKRSGFFSEAVKINKNEAISDSYNATRR--------NKDSK 230
           SAR VFEPFP FLL++KEIR RSG+FS        E+ S   N T++        ++   
Sbjct: 447 SARDVFEPFPAFLLQDKEIRGRSGWFSND---TVRESASKLTNLTQKMWDDLEDMDESEP 503

Query: 229 VNNNKDMELLKKIIVSFPPIEEMQKCSSEIELICKMSKPW 110
           + +NK+ ELL++I+ S PPI+++QKC+ E  L   +++ W
Sbjct: 504 LKSNKNSELLREILASIPPIDKIQKCADERSLKKVLTRSW 543


>ref|XP_001782576.1| predicted protein [Physcomitrella patens]
           gi|162665896|gb|EDQ52565.1| predicted protein
           [Physcomitrella patens]
          Length = 939

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
 Frame = -2

Query: 385 SARAVFEPFPPFLLKEKEIRKRSGFFSEAVKINKNEAISDSYNATR-----------RNK 239
           S R VFEPFP F L++ E+R RSG+FS     N +E  S S N  +            ++
Sbjct: 446 SKRDVFEPFPAFSLQKDELRLRSGWFSNN---NMSETASRSKNRIKTAYQMPILGAVEDE 502

Query: 238 DSKVNNNKDMELLKKIIVSFPPIEEMQKCSSEIELICKMSKPW 110
            S V +NK+ + L + + S PPI  +QKC+ E  L   +++ W
Sbjct: 503 KSAVQSNKNTKQLSEALASIPPINVLQKCADERSLKRVLARAW 545


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