BLASTX nr result
ID: Ephedra28_contig00025924
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00025924 (1257 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 261 4e-67 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 259 2e-66 gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 258 5e-66 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 256 1e-65 gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 256 1e-65 emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 256 2e-65 gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 253 1e-64 gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 250 2e-64 gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza... 249 3e-64 emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 247 2e-63 gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 243 2e-62 emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 244 5e-62 emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 243 1e-61 emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera] 241 6e-61 emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera] 233 2e-58 emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 229 2e-57 emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] 229 2e-57 gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 224 8e-56 gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group] 224 8e-56 emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 223 1e-55 >emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1272 Score = 261 bits (667), Expect = 4e-67 Identities = 157/416 (37%), Positives = 222/416 (53%), Gaps = 23/416 (5%) Frame = +3 Query: 75 INKKNMFLNLVYLGNNTNYLF-QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFID 251 IN N LGN F + SRA K L+LIH+D+CGP K+ YF+ FID Sbjct: 495 INHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFID 554 Query: 252 DFSRFCWIYLLRNKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKG 431 DFSR W+Y L+ K E + F KF +V+ E I +RSD G E+ S F + CE G Sbjct: 555 DFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNG 614 Query: 432 IKRKITIPYNPQ*NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKG 611 I+R++T+P +PQ NGV ER NRT++E R +L L K W EAV Y+ N P K Sbjct: 615 IRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKS 674 Query: 612 LNIKSPMEV*YGVKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKL 791 ++ K+P E G KP +SH FG ++P EKR KLD+K++K IF+GY + +KGYKL Sbjct: 675 VSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKL 734 Query: 792 MDLD*KKIIISREVK-------DTKSNPCKDNYLTVSAISAPD-TKE---NHIPNGLRKQ 938 + D KK IISR + D SN N+ P+ T+E + P Sbjct: 735 YNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTS 794 Query: 939 PLWYKLMMEEAERFVKGKNIE-----------VNLCCPIDLEIPKSPTEAIKK*HWKKAM 1085 P ++ +ER + ++I+ + L C P EAI+K W+ AM Sbjct: 795 PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAM 854 Query: 1086 DEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 DEE+ +++ + W L +P G K IG +W+Y K G +++YKARLV +G+SQ+ Sbjct: 855 DEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQR 910 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 259 bits (661), Expect = 2e-66 Identities = 152/401 (37%), Positives = 212/401 (52%), Gaps = 8/401 (1%) Frame = +3 Query: 75 INKKNMFLNLVYLGNNTNYLF-QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFID 251 IN N LG F + SRA K L+LIH+D+CGP K+ YF+ FID Sbjct: 495 INHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFID 554 Query: 252 DFSRFCWIYLLRNKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKG 431 DFSR W+Y L+ K E + F KF +V+ E I +RSD G E+ S F + CE G Sbjct: 555 DFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNG 614 Query: 432 IKRKITIPYNPQ*NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKG 611 I+R++T+P +PQ NGV ER NRT++E R +L L K W EAV Y+ N P K Sbjct: 615 IRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKS 674 Query: 612 LNIKSPMEV*YGVKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKL 791 ++ K+P E G KP +SH FG ++P EKR KLD+K++K IF+GY + +KGYKL Sbjct: 675 VSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKL 734 Query: 792 MDLD*KKIIISREVK-------DTKSNPCKDNYLTVSAISAPDTKENHIPNGLRKQPLWY 950 + D KK IISR + D SN N+ P+ P+ P Sbjct: 735 YNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTS 794 Query: 951 KLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANMESKNVWRL 1130 + E+ C P+D + EAI+K W+ AMDEE+ +++ + W L Sbjct: 795 PTSSQIEEK-----------CEPMDFQ------EAIEKKTWRNAMDEEIKSIQKNDTWEL 837 Query: 1131 EEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 +P G K IG +W+Y K G +++YKARLV +G+SQ+ Sbjct: 838 TSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQR 878 >gb|AGW47867.1| polyprotein [Phaseolus vulgaris] Length = 1471 Score = 258 bits (658), Expect = 5e-66 Identities = 134/363 (36%), Positives = 208/363 (57%) Frame = +3 Query: 168 LDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KYVQNEK 347 L+LIH+D+CGP ++ + YFITFIDDFSR W+Y L+ K E + F KF V+ Sbjct: 548 LELIHTDICGPITPESFSGKRYFITFIDDFSRKTWVYFLKEKSEAFEVFKKFKVMVERTT 607 Query: 348 SEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEATRCLL 527 ++I +RSD G EY S F E CE++GI+R +T PY PQ NGV ER NRT+++ R +L Sbjct: 608 DKQIKAVRSDRGGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSML 667 Query: 528 HDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETYLYYIP 707 + K +W EAV Y+ N P+ L+ ++P E G KP +SH FG ++P Sbjct: 668 KSKKMPKEFWAEAVQCAIYVQNRCPHVKLDDQTPQEAWSGQKPTVSHLKVFGSVAYAHVP 727 Query: 708 KEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVKDTKSNPCKDNYLTVSAI 887 ++R KL++K+K+ +F+GY TKGYKL+D KK+ +SR+V+ +++ N + I Sbjct: 728 DQRRTKLEDKSKRYVFIGYDEKTKGYKLLDPISKKVTVSRDVQINEASEWDWNNSSEVMI 787 Query: 888 SAPDTKENHIPNGLRKQPLWYKLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK* 1067 ++ I + + + + EV+L C + S EA++ Sbjct: 788 EVGESSPTSINSETTDDEDEPRQPKIRSLHDLYDSTNEVHLVCLLADAENISFEEAVRDK 847 Query: 1068 HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFS 1247 W+ AMDEE+ ++ N W L E+P+G + IG +W++ K+ G +++YKARLV +G+ Sbjct: 848 KWQTAMDEEIKAIDRNNTWELTELPEGSQPIGVKWIFKKKMNAQGEIERYKARLVAKGYK 907 Query: 1248 QKE 1256 QKE Sbjct: 908 QKE 910 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 256 bits (655), Expect = 1e-65 Identities = 155/416 (37%), Positives = 221/416 (53%), Gaps = 23/416 (5%) Frame = +3 Query: 75 INKKNMFLNLVYLGNNTNYLF-QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFID 251 IN N LG F + SRA K L+LIH+D+CGP K+ YF+ FID Sbjct: 495 INHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFID 554 Query: 252 DFSRFCWIYLLRNKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKG 431 DFSR W+Y L+ K E + F KF +V+ E I +RSD G E+ S F + CE G Sbjct: 555 DFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNG 614 Query: 432 IKRKITIPYNPQ*NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKG 611 I+R++T+P +PQ NGV ER NRT++E R +L L K W EAV Y+ N P K Sbjct: 615 IRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKS 674 Query: 612 LNIKSPMEV*YGVKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKL 791 ++ K+P E G KP +SH FG ++P EKR KLD+K++K IF+GY + +KGYKL Sbjct: 675 VSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKL 734 Query: 792 MDLD*KKIIISREVK-------DTKSNPCKDNYLTVSAISAPD-TKE---NHIPNGLRKQ 938 + D KK IISR + D SN N+ P+ T+E + P Sbjct: 735 YNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTS 794 Query: 939 PLWYKLMMEEAERFVKGKNIE-----------VNLCCPIDLEIPKSPTEAIKK*HWKKAM 1085 P ++ +ER + ++I+ + L C P +AI+K W+ AM Sbjct: 795 PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAM 854 Query: 1086 DEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 DEE+ +++ + W L +P G K IG +W+Y K G +++YKARLV +G+SQ+ Sbjct: 855 DEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQR 910 >gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 256 bits (655), Expect = 1e-65 Identities = 155/416 (37%), Positives = 221/416 (53%), Gaps = 23/416 (5%) Frame = +3 Query: 75 INKKNMFLNLVYLGNNTNYLF-QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFID 251 IN N LG F + SRA K L+LIH+D+CGP K+ YF+ FID Sbjct: 495 INHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFID 554 Query: 252 DFSRFCWIYLLRNKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKG 431 DFSR W+Y L+ K E + F KF +V+ E I +RSD G E+ S F + CE G Sbjct: 555 DFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNG 614 Query: 432 IKRKITIPYNPQ*NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKG 611 I+R++T+P +PQ NGV ER NRT++E R +L L K W EAV Y+ N P K Sbjct: 615 IRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKS 674 Query: 612 LNIKSPMEV*YGVKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKL 791 ++ K+P E G KP +SH FG ++P EKR KLD+K++K IF+GY + +KGYKL Sbjct: 675 VSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKL 734 Query: 792 MDLD*KKIIISREVK-------DTKSNPCKDNYLTVSAISAPD-TKE---NHIPNGLRKQ 938 + D KK IISR + D SN N+ P+ T+E + P Sbjct: 735 YNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTS 794 Query: 939 PLWYKLMMEEAERFVKGKNIE-----------VNLCCPIDLEIPKSPTEAIKK*HWKKAM 1085 P ++ +ER + ++I+ + L C P +AI+K W+ AM Sbjct: 795 PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAM 854 Query: 1086 DEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 DEE+ +++ + W L +P G K IG +W+Y K G +++YKARLV +G+SQ+ Sbjct: 855 DEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQR 910 >emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] Length = 623 Score = 256 bits (653), Expect = 2e-65 Identities = 147/389 (37%), Positives = 214/389 (55%), Gaps = 22/389 (5%) Frame = +3 Query: 153 RATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KY 332 ++TK ++LIH+D+CGP K+ YF+ FIDDFSR W+Y L+ K E + F KF + Sbjct: 19 KSTKTVELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAH 78 Query: 333 VQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEA 512 V+ E I +RSD G E+ S F + CE GI+R++T+P +PQ NGV ER NRT++E Sbjct: 79 VEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEM 138 Query: 513 TRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETY 692 R +L L K W EAV Y+ N P K ++ K+P E G KP +SH FG Sbjct: 139 ARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIA 198 Query: 693 LYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVK-------DTKSN 851 ++P EKR KLD+K++K IF+GY + +KGYKL + D KK IISR + D SN Sbjct: 199 HAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSN 258 Query: 852 PCKDNYLTVSAISAPD-TKE---NHIPNGLRKQPLWYKLMMEEAERFVKGKNIE------ 1001 N+ P+ T+E + P P ++ +ER + ++I+ Sbjct: 259 EEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVT 318 Query: 1002 -----VNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGC 1166 + L C P EAI+K W+ AMDEE+ +++ + W L +P G K IG Sbjct: 319 ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGV 378 Query: 1167 RWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 +W+Y K G +++YKARLV +G+SQ+ Sbjct: 379 KWVYKAKKNSKGEVERYKARLVAKGYSQR 407 >gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1352 Score = 253 bits (646), Expect = 1e-64 Identities = 154/416 (37%), Positives = 219/416 (52%), Gaps = 23/416 (5%) Frame = +3 Query: 75 INKKNMFLNLVYLGNNTNYLF-QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFID 251 IN N LG F + SRA K L+LIH+D+CGP K+ YF+ FID Sbjct: 495 INHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFID 554 Query: 252 DFSRFCWIYLLRNKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKG 431 DFSR W+Y L+ K E + F KF +V+ E I +RSD G E+ S F + CE G Sbjct: 555 DFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNG 614 Query: 432 IKRKITIPYNPQ*NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKG 611 I+R++T+P +PQ NGV ER NRT++E R +L L K W EAV Y+ N P K Sbjct: 615 IRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKS 674 Query: 612 LNIKSPMEV*YGVKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKL 791 ++ K+P E G K +SH FG ++P EKR KLD+K++K IF+GY + +KGYKL Sbjct: 675 VSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKL 734 Query: 792 MDLD*KKIIISREVK-------DTKSNPCKDNYLTVSAISAPD-TKE---NHIPNGLRKQ 938 + D KK IISR + D SN N+ P+ T+E + P Sbjct: 735 YNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTS 794 Query: 939 PLWYKLMMEEAERFVKGKNIE-----------VNLCCPIDLEIPKSPTEAIKK*HWKKAM 1085 P ++ +ER + ++I+ + L C P EAI+K W+ AM Sbjct: 795 PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAM 854 Query: 1086 DEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 DEE+ +++ + W L +P G K IG +W+Y K G +++YKARLV +G+ Q+ Sbjct: 855 DEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQR 910 >gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group] gi|108711922|gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1335 Score = 250 bits (638), Expect(2) = 2e-64 Identities = 150/408 (36%), Positives = 214/408 (52%), Gaps = 41/408 (10%) Frame = +3 Query: 153 RATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KY 332 RA+ L+L+H+D+ G + YFITFIDD++R W+Y L+ K L+ F KF Sbjct: 512 RASAPLELVHADIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAM 571 Query: 333 VQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEA 512 V+N+ + KI LRSD G EY S F++ CE GI+R++T Y+ Q NGV ER NRT+ + Sbjct: 572 VENQSNRKIKVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDM 631 Query: 513 TRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETY 692 +L D + KS+W EAV T YI N P K + ++P E YG KP I H FG Sbjct: 632 ANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCIC 691 Query: 693 LYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISR--------------- 827 +P +KR K D K+ + IF+GY G KGY+L +L+ KKIIISR Sbjct: 692 YAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFDESATWNWKSP 751 Query: 828 ------------------------EVKDTKSNPCKDNYLTVSAISAPD--TKENHIPNGL 929 EV+D +P + ++ S+ S+ + E I Sbjct: 752 EASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTP- 810 Query: 930 RKQPLWYKLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANME 1109 P + M+E E + + E + C + P+S EA K +W KAM++E+ +E Sbjct: 811 ESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIE 870 Query: 1110 SKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 N W L + P+ ++ IG +W+Y KL PDGS+ KYKARLV +GF QK Sbjct: 871 KNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQK 918 Score = 24.3 bits (51), Expect(2) = 2e-64 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 98 ESCVFGKQHKLPFPN 142 E CVFGKQ + FP+ Sbjct: 493 EGCVFGKQIRASFPH 507 >gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group] gi|31429795|gb|AAP51797.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1350 Score = 249 bits (637), Expect(2) = 3e-64 Identities = 151/408 (37%), Positives = 214/408 (52%), Gaps = 41/408 (10%) Frame = +3 Query: 153 RATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KY 332 RA+ L+L+H+D+ G + YFITFIDD++R W+Y L+ K L+ F KF Sbjct: 435 RASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAM 494 Query: 333 VQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEA 512 V+N+ + KI LRSD G EY S F++ CE GI+R++T Y+ Q NGV ER NRT+ + Sbjct: 495 VENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDM 554 Query: 513 TRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETY 692 +L D + KS+W EAV T YI N P K + ++P E YG KP I H FG Sbjct: 555 ANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCIC 614 Query: 693 LYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISRE-------------- 830 +P +KR K D K+ IF+GY G KGY+L +L+ KKIIISR+ Sbjct: 615 YAQVPAQKRVKFDNKSDWCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDESATWNWKSP 674 Query: 831 -------------------------VKDTKSNPCKDNYLTVSAISAPD--TKENHIPNGL 929 V+D S+P + ++ S+ S+ + E I Sbjct: 675 EASSTPLLPTTTITLGQPHMHGTHGVEDHTSSPQSSSPMSSSSASSDSSPSSEEQISTP- 733 Query: 930 RKQPLWYKLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANME 1109 P + M+E E + + E + C + P+S EA K +W KAM++E+ +E Sbjct: 734 ESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIE 793 Query: 1110 SKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 N W L + P+ +K IG +W+Y KL PDGS+ KYKARLV +GF QK Sbjct: 794 KNNTWELVDRPRDRKVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQK 841 Score = 24.3 bits (51), Expect(2) = 3e-64 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 98 ESCVFGKQHKLPFPN 142 E CVFGKQ + FP+ Sbjct: 416 EGCVFGKQIRASFPH 430 >emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] Length = 1314 Score = 247 bits (630), Expect(2) = 2e-63 Identities = 149/409 (36%), Positives = 212/409 (51%), Gaps = 42/409 (10%) Frame = +3 Query: 153 RATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KY 332 RA+ +L+H+D+ G + YFITFIDD++R W+Y L+ K L+TF KF Sbjct: 519 RASAPFELVHTDIVGKVPTMSEGGNWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVM 578 Query: 333 VQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEA 512 V+N+ + KI LRSD G EY S F++ CE GI+R++T Y+ Q NGV ER NRT+ + Sbjct: 579 VENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDM 638 Query: 513 TRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETY 692 +L D + KS+W EAV T YI N P K + ++P E YG KP I H F Sbjct: 639 ANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACIC 698 Query: 693 LYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVKDTKSNPCKDNYL 872 +P +KR K D K+ + IF+GY G KGY+L +L+ KKIIISR+V +S N+ Sbjct: 699 YAQVPAQKRVKFDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFFDES--ATWNWK 756 Query: 873 TVSAISAP-----------------DTKENHIPNGLRKQPL------------------- 944 + A S P E+H P+ P+ Sbjct: 757 SPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQIST 816 Query: 945 ------WYKLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANM 1106 + M+E E + + E + C + P+S EA K +W KAM++E+ + Sbjct: 817 PESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMI 876 Query: 1107 ESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 E N W + P+ ++ IG +W+Y KL PDGS+ KYKARLV +GF QK Sbjct: 877 EKNNTWEFVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQK 925 Score = 23.9 bits (50), Expect(2) = 2e-63 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 98 ESCVFGKQHKLPFPN 142 E CVFGKQ + FP+ Sbjct: 500 EGCVFGKQIQASFPH 514 >gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1142 Score = 243 bits (620), Expect(2) = 2e-62 Identities = 149/409 (36%), Positives = 212/409 (51%), Gaps = 42/409 (10%) Frame = +3 Query: 153 RATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KY 332 RA+ L+L+H+D+ G + YFITFIDD++R W+Y L+ K L+ F KF Sbjct: 302 RASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAM 361 Query: 333 VQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEA 512 V+N+ + KI LRSD G EY S F++ CE GI+R++T Y+ Q NGV ER NRT+ + Sbjct: 362 VENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSTQQNGVAERKNRTINDM 421 Query: 513 TRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETY 692 +L D + KS+W EAV T YI N P K + ++P E YG KP I H FG Sbjct: 422 ANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCIC 481 Query: 693 LYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVKDTKSNPCKDNYL 872 +P +KR K D K+ + IF+GY G KGY+L +L+ KKIII R+V +S N+ Sbjct: 482 YAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIIIRDVIFDES--ATWNWK 539 Query: 873 TVSAISAP-----------------DTKENHIPNGLRKQPL------------------- 944 + A S P E+H P+ P+ Sbjct: 540 SPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQIST 599 Query: 945 ------WYKLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANM 1106 + M+E E + + E + C + P+S EA K +W KAM++E+ + Sbjct: 600 PESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMI 659 Query: 1107 ESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 E N W L + P+ ++ IG +W+Y KL DGS+ KYKARLV +GF QK Sbjct: 660 EKNNTWELVDRPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQK 708 Score = 24.3 bits (51), Expect(2) = 2e-62 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 98 ESCVFGKQHKLPFPN 142 E CVFGKQ + FP+ Sbjct: 283 EGCVFGKQIRASFPH 297 >emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] Length = 1283 Score = 244 bits (623), Expect = 5e-62 Identities = 149/393 (37%), Positives = 212/393 (53%), Gaps = 12/393 (3%) Frame = +3 Query: 111 LGNNTNYLF-QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLR 287 +G Y F + K R K L+L+HSD+CGP ++ YFITFI D+S W+Y L+ Sbjct: 465 VGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITFIXDYSXKTWVYFLQ 524 Query: 288 NKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ 467 K E TF F V+ E + I RSD G EY S F CE GI++++T Y+PQ Sbjct: 525 EKSEAFSTFKSFKMLVEKEAXKPIKIFRSDXGGEYTSQEFVNFCENHGIQKQLTAAYSPQ 584 Query: 468 *NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YG 647 NG R NRT++ R +L ++ +S+W EAVI + +I N P + +P E G Sbjct: 585 QNGXSXRKNRTILNMVRTILSKGHIPRSFWPEAVIWSIHILNRSPTLVVQNVTPXEAWNG 644 Query: 648 VKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISR 827 KP ++HF FG +IP +KR+KLD+K +K IFLG +K YKL + KKI ISR Sbjct: 645 RKPSVNHFRIFGCIAYAHIPXQKRKKLDDKGEKCIFLGVSEXSKAYKLYNPITKKIXISR 704 Query: 828 EVKDTKSNPCK-DNYLTVSAISAPDTKENHIPNGLRKQPLWYKLMMEEAERFVKGKNIEV 1004 ++ + + K D+ T I A EN R+QPL ++ E E Sbjct: 705 DIIFDEGSFWKWDDNTTKQQIQABFDGENEEE---RQQPLQQQIPXAEIPPNEAPTTAET 761 Query: 1005 NLCCP-IDLEI---------PKSPTEAIKK*HWKKAMDEEMANMESKNVWRLEEIPKGKK 1154 + P D ++ P + A+K+ W+KAMD E+A +E + W L E+PKG K Sbjct: 762 SPTTPEFDEQVEAXVGXNCDPTTFESAVKESKWRKAMDAEIAAIERNDTWELSELPKGHK 821 Query: 1155 EIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 IG +W+Y KLK +G +DKYKARLV +G+ Q+ Sbjct: 822 TIGVKWVYKTKLKENGEVDKYKARLVAKGYKQE 854 >emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] Length = 1041 Score = 243 bits (620), Expect = 1e-61 Identities = 154/407 (37%), Positives = 213/407 (52%), Gaps = 31/407 (7%) Frame = +3 Query: 126 NYLFQIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEEL 305 N Q+K RA K L+L+HSD+CGP + ++ S Y ITFIDD+SR W+Y L+ K E Sbjct: 285 NQFPQVKSWRAKKALELVHSDICGPIIPNSNGSKRYIITFIDDYSRKIWVYFLQEKSEAF 344 Query: 306 QTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFE 485 F + V+ E I R D G EYNS F CE GI+R++T Y PQ NGV E Sbjct: 345 VAFKSYKALVEKEVGNPIKFFRMDRGGEYNSHEFANFCENHGIRRQLTATYIPQQNGVCE 404 Query: 486 RGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDIS 665 R N T++ R LL S + KS+W EAV + +I N P + +P E G K ++ Sbjct: 405 RKNSTIMNMVRSLLTTSGIPKSFWLEAVNWSIHILNRSPTLVVQNMTPKEAWSGRKLVVN 464 Query: 666 HFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREV---- 833 HF FG YIP EKRRKLD K +K IFLG K YKL + KI++SR+V Sbjct: 465 HFRIFGCIAYAYIPDEKRRKLDNKGEKCIFLGVSDKLKAYKLYNPSTMKIVLSRDVVFDE 524 Query: 834 KDT---KSNPCKDNY-----------------------LTVSAI-SAPDTKENHIPNGLR 932 KDT K N K+N V + +P E+ P +R Sbjct: 525 KDTWSWKQNGVKENIPVDFDDDEKWQQPMENEQEEEVTQNVPIVDQSPLATESQRPQRVR 584 Query: 933 KQPLWYKLMMEEAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANMES 1112 K+P W + E +G++ D ++ T A+K+ W+KAMD E+A +E Sbjct: 585 KRPAW--MTNHEVTGVDQGEDPLTYFAMFSDCDLIIFET-AVKEPKWRKAMDAEIAAIER 641 Query: 1113 KNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 + W L ++PKG+K IG +W+Y KLK +G +DK+KA LV +G+ Q+ Sbjct: 642 NDTWELCDLPKGQKTIGVKWVYKTKLKENGEVDKHKACLVAKGYKQE 688 >emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera] Length = 894 Score = 241 bits (614), Expect = 6e-61 Identities = 138/396 (34%), Positives = 208/396 (52%), Gaps = 11/396 (2%) Frame = +3 Query: 99 NLVYLGN--NTNYLFQIKDSRATKFLDLIHSDLCGPKLVKTHT-------SYIYFITFID 251 NL+ +G Y Q KD++ F LC K+ Y Y + Sbjct: 58 NLLSVGQMLEKQYFLQFKDNQCVIFDPYGEKLLCMKMKSKSFAINWENAAEYAYAGVTQN 117 Query: 252 DFSRFCWIYLLRNKKEELQTFIKF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKG 431 D++R CW+Y ++ K E F +F V+N+ + I LRSD GTEY S F E C G Sbjct: 118 DYTRMCWVYFIKLKNEVFSVFKQFKALVENQSNLSIKILRSDNGTEYTSSQFVEFCSTAG 177 Query: 432 IKRKITIPYNPQ*NGVFERGNRTLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKG 611 I+ ++T PY PQ NGV ER NRT++E RCLL + + ++W EAV T+ Y+ N P K Sbjct: 178 IECQLTTPYTPQQNGVSERKNRTVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKS 237 Query: 612 LNIKSPMEV*YGVKPDISHFLEFGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKL 791 L K+P E YGVKP ++H FG Y++P+ KR KLD +A+KGI +GY + TKGY++ Sbjct: 238 LKNKTPYEEWYGVKPFVNHLKIFGSICYYHVPEPKRSKLDSRAQKGILIGYGTSTKGYRI 297 Query: 792 MDLD*KKIIISREVK--DTKSNPCKDNYLTVSAISAPDTKENHIPNGLRKQPLWYKLMME 965 L K+++SR VK + + CK+ S + + ++ + P+ +E Sbjct: 298 FCLQTNKVVLSRNVKVDEMATWDCKNKKYAQSDVDFNNHEDFQTSKSVDDFPVRGIRSLE 357 Query: 966 EAERFVKGKNIEVNLCCPIDLEIPKSPTEAIKK*HWKKAMDEEMANMESKNVWRLEEIPK 1145 ++ C + + P S EA W++AM EE+ + W+L E PK Sbjct: 358 -----------DIYQRCSLAITEPTSYVEAKDSEAWRRAMQEELKMINKNETWQLVERPK 406 Query: 1146 GKKEIGCRWLYTIKLKPDGSLDKYKARLVVQGFSQK 1253 K IG +W++ KL DGS+ K+KA+LVV+G++Q+ Sbjct: 407 NHKVIGVKWVFKTKLNSDGSICKHKAKLVVKGYAQQ 442 >emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera] Length = 1220 Score = 233 bits (593), Expect = 2e-58 Identities = 134/373 (35%), Positives = 201/373 (53%), Gaps = 2/373 (0%) Frame = +3 Query: 138 QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFI 317 Q RAT L+LIHS +CGP + + ++ +YF FIDD SR W+Y L+ K + L F Sbjct: 485 QNMSKRATHELELIHSYICGPMSIASLSNNVYFALFIDDLSRMTWVYFLKTKSQVLSMFK 544 Query: 318 KF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNR 497 F K V+ + + + L D G EY S F +T PY PQ N V ER N+ Sbjct: 545 SFKKMVETQSGQNVKVLIIDNGGEYISKEFN-----------LTAPYLPQQNEVSERKNK 593 Query: 498 TLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLE 677 T++E RC+L + L K W EAV T+ Y+ N P K + K+P+E +GVKP + H Sbjct: 594 TVMEMARCMLFEKRLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEAWFGVKPSVKHLKV 653 Query: 678 FGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVKDTKSNPC 857 FG ++P KR KLDE+A+KG+F+GY + +KGY++ L KI+ISR+V +++ Sbjct: 654 FGSLCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVHFDENSYW 713 Query: 858 KDNYLTVSAI--SAPDTKENHIPNGLRKQPLWYKLMMEEAERFVKGKNIEVNLCCPIDLE 1031 + V + P E I + + + PL + + ++ + C + E Sbjct: 714 NWDLKKVHKCDQNTPSILEPAIESIIIEGPLDVEATSDTPMLKMRPLSDVYERCNLVHAE 773 Query: 1032 IPKSPTEAIKK*HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLD 1211 P TEA + W KAM E+ +E W+L E+P+ K IG +W++ K DGS+ Sbjct: 774 -PTCYTEAARFLEWIKAMKAEIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIF 832 Query: 1212 KYKARLVVQGFSQ 1250 ++KARLVV+GF+Q Sbjct: 833 RHKARLVVKGFAQ 845 >emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] Length = 1291 Score = 229 bits (584), Expect = 2e-57 Identities = 132/373 (35%), Positives = 201/373 (53%), Gaps = 2/373 (0%) Frame = +3 Query: 138 QIKDSRATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFI 317 Q RAT L+LIHSD+CGP + ++ +YF FIDDFSR W+Y L+ K + L F Sbjct: 509 QNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFK 568 Query: 318 KF*KYVQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNR 497 F K V+ + + + G +E + ++T PY+PQ NGV ER NR Sbjct: 569 SFKKMVETQSGQNV-----KGASE--------------LIMELTTPYSPQQNGVSERKNR 609 Query: 498 TLVEATRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLE 677 T++E RC+L + L K W EAV T+ Y+ N P K + K+P+E GVKP + H Sbjct: 610 TVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKV 669 Query: 678 FGETYLYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVKDTKSNPC 857 FG ++P KR KLDE+A+KG+F+GY + +KGY++ L KI+ISR+V +++ Sbjct: 670 FGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVHFDENSYW 729 Query: 858 KDNYLTVSAI--SAPDTKENHIPNGLRKQPLWYKLMMEEAERFVKGKNIEVNLCCPIDLE 1031 + V + P E I + + + PL + + ++ + C + E Sbjct: 730 NWDLKKVHKCDQTTPSILEPAIESTIIEGPLDVEATSDTPVLKMRPLSDVYERCNLVHAE 789 Query: 1032 IPKSPTEAIKK*HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYTIKLKPDGSLD 1211 P TEA + W +AM E+ +E W+L E+P+ K IG +W++ K DGS+ Sbjct: 790 -PTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIF 848 Query: 1212 KYKARLVVQGFSQ 1250 ++KARLVV+GF+Q Sbjct: 849 RHKARLVVKGFAQ 861 >emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] Length = 1358 Score = 229 bits (583), Expect = 2e-57 Identities = 140/385 (36%), Positives = 216/385 (56%), Gaps = 17/385 (4%) Frame = +3 Query: 153 RATKFLDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KY 332 R T L+LIHSD+C V T YFI+F DD SR+ ++YLL +K E + F + Sbjct: 545 RNTSLLELIHSDICELNGVLTRGGKRYFISFCDDSSRYLYVYLLHSKDEAFEAFKIYKAE 604 Query: 333 VQNEKSEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEA 512 V+ +K ++I LRSD G EY + F CE++GI + T PY PQ NG+ ER NRTLVE Sbjct: 605 VEKQKEKRIKILRSDRGGEYFNRRFDAFCEEEGIIHERTAPYTPQQNGLAERKNRTLVEM 664 Query: 513 TRCLLHDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETY 692 C+L+ S L ++ W EAV+T Y+ N ++ + SP E+ G KP++ H +G Sbjct: 665 ANCMLNQSGLPRNMWGEAVLTACYVHNRITSRVIP-TSPYELWKGRKPNLEHLRVWGCLA 723 Query: 693 LYYIPKEKRRKLDEKAKKGIFLGYPSGTKGYKLMDLD*KKIIISREVKDTKSNPCKD--- 863 Y +P K KL E+A K +F+GY S +K Y+L+D + ++ SR+V+ ++ +D Sbjct: 724 YYRVPDPKTLKLGERAFKSVFIGYASHSKSYRLLDDESGIVVESRDVEFFENKFSRDDEN 783 Query: 864 -NYLTVSAIS------APDTKENHIPNGLRKQPLW----YKLMMEEAERFVKGKNIEVNL 1010 N T S+ S +P +E +RK+ + + ++E ++ V EV Sbjct: 784 SNGTTTSSTSEKRVQPSPIVEEPRKSTRVRKEKSYGDDFFSYLVEGTQKKVMR---EVIF 840 Query: 1011 CCPIDLEIPKSPTEAIKK*H---WKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYT 1181 +D + PK+ EA+ WK+A+++EM ++ W L ++PKGKK IG +W++ Sbjct: 841 AVNLD-DDPKTFNEAMSSRDAPLWKEAVNDEMDSIMGNGTWELADLPKGKKPIGSKWIFK 899 Query: 1182 IKLKPDGSLDKYKARLVVQGFSQKE 1256 K PDGS+ YKARLV +G+ Q+E Sbjct: 900 RKYHPDGSISAYKARLVAKGYRQRE 924 >gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1287 Score = 224 bits (570), Expect = 8e-56 Identities = 138/384 (35%), Positives = 215/384 (55%), Gaps = 21/384 (5%) Frame = +3 Query: 168 LDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KYVQNEK 347 L+L+HSDLC V T YF+TFIDD +RFC++YLL+ K E L F + V+N+ Sbjct: 451 LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 510 Query: 348 SEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEATRCLL 527 KI LRSD G E+ S F CE+ GI ++T PY+P+ NG+ ER NRTL + +L Sbjct: 511 DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAML 570 Query: 528 HDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETYLYYIP 707 + L K+WW EA++T+N++ N PN+ + K+P E+ G KP +S+ +G +P Sbjct: 571 DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLAKVNVP 629 Query: 708 KEKRRKLDEKAKKGIFLGYPSGTKGYKLM-------DLD*KKIIISRE---------VKD 839 K+RKL K +FLGY + Y+ + D+ I+ SR+ +KD Sbjct: 630 ITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDAIFFESFFPMKD 689 Query: 840 TKSNPCKDNYLTVSAISAPDTKENHIPNGLRKQPLWYKLMMEEAERFVK--GKNIEVNLC 1013 T S + + + S+I+ P+ E H + ++ + + +R K G + V L Sbjct: 690 THSGSNQPSEIIPSSITPPEQTE-HTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYL- 747 Query: 1014 CPIDLEIPKSPTEAIKK---*HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYTI 1184 +D + PKS +EA +WK+A+ EM ++ + W + E P G K +GC+W++ Sbjct: 748 --VD-DTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 804 Query: 1185 KLKPDGSLDKYKARLVVQGFSQKE 1256 KL+PDG+++KYKARLV +G++QKE Sbjct: 805 KLRPDGTIEKYKARLVAKGYTQKE 828 >gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1433 Score = 224 bits (570), Expect = 8e-56 Identities = 135/384 (35%), Positives = 214/384 (55%), Gaps = 21/384 (5%) Frame = +3 Query: 168 LDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KYVQNEK 347 L+L+HSDLC V T YF+T IDD +RFC++YLL+ K E L F + V+N+ Sbjct: 490 LELLHSDLCEMNGVLTKGEKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 549 Query: 348 SEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEATRCLL 527 KI LRSD G E+ S F CE+ GI + T PY+P+ NG+ ER NRTL + +L Sbjct: 550 DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAML 609 Query: 528 HDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETYLYYIP 707 + L K+WW EA++T+N++ N PN+ + K+P E+ G KP +S+ +G +P Sbjct: 610 DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668 Query: 708 KEKRRKLDEKAKKGIFLGYPSGTKGYK-------LMDLD*KKIIISRE---------VKD 839 K+RKL K +FLGY + Y+ ++D+ I+ SR+ +KD Sbjct: 669 ITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIMESRDATFFESFFPMKD 728 Query: 840 TKSNPCKDNYLTVSAISAPDTKENHIPNGLRKQPLWYKLMMEE--AERFVKGKNIEVNLC 1013 T S + + + +S+I+ P+ E+ ++L+ EE +E + K + + Sbjct: 729 THSGSNQPSEIILSSITPPEQTEH-----------THELVSEEDVSEALRRSKRLGDDFT 777 Query: 1014 CPIDLEIPKSPTEAIKK---*HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYTI 1184 + + PKS +EA +WK+A+ EM ++ + W + E P G K +GC+W++ Sbjct: 778 VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 837 Query: 1185 KLKPDGSLDKYKARLVVQGFSQKE 1256 KL+PDG+++KYKARLV +G++QKE Sbjct: 838 KLRPDGTIEKYKARLVAKGYTQKE 861 >emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] Length = 1320 Score = 223 bits (568), Expect = 1e-55 Identities = 139/384 (36%), Positives = 215/384 (55%), Gaps = 21/384 (5%) Frame = +3 Query: 168 LDLIHSDLCGPKLVKTHTSYIYFITFIDDFSRFCWIYLLRNKKEELQTFIKF*KYVQNEK 347 L+L+HSDLC V T YF+TFIDD +RFC++YLL+ K E L F + V+N+ Sbjct: 490 LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 549 Query: 348 SEKIGCLRSDGGTEYNSIIFKEICEKKGIKRKITIPYNPQ*NGVFERGNRTLVEATRCLL 527 KI LRSD G E+ S F CE+ GI + T PY+P+ NG+ ER NRTL + +L Sbjct: 550 DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAML 609 Query: 528 HDSNLEKSWWREAVITTNYITNHWPNKGLNIKSPMEV*YGVKPDISHFLEFGETYLYYIP 707 + L K+WW EA++T+N++ N PN+ + K+P E+ G KP +S+ +G +P Sbjct: 610 DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRIWGCLAKVNVP 668 Query: 708 KEKRRKLDEKAKKGIFLGYPSGTKGYK-------LMDLD*KKIIISRE---------VKD 839 K+RKL K +FLGY + Y+ ++D+ II SR+ +KD Sbjct: 669 ITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIIESRDATFFESFFPMKD 728 Query: 840 TKSNPCKDNYLTVSAISAPDTKENHIPNGLRKQPLWYKLMMEEAERFVK--GKNIEVNLC 1013 T S + + + S+I+ P+ E H + ++ + + +R K G + V L Sbjct: 729 THSGSNQPSEIIPSSITPPEQTE-HTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYL- 786 Query: 1014 CPIDLEIPKSPTEAIKK---*HWKKAMDEEMANMESKNVWRLEEIPKGKKEIGCRWLYTI 1184 +D + PKS +EA +WK+A+ EM ++ + W + E P G K +GC+W++ Sbjct: 787 --VD-DTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843 Query: 1185 KLKPDGSLDKYKARLVVQGFSQKE 1256 KL+PDG+++KYKARLV +G++QKE Sbjct: 844 KLRPDGTIEKYKARLVAKGYTQKE 867