BLASTX nr result
ID: Ephedra28_contig00025921
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00025921 (589 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07 ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07 ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 58 2e-06 gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 57 4e-06 gb|EEE61501.1| hypothetical protein OsJ_15790 [Oryza sativa Japo... 57 5e-06 gb|EEE57924.1| hypothetical protein OsJ_08622 [Oryza sativa Japo... 56 8e-06 >ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum tuberosum] Length = 450 Score = 62.0 bits (149), Expect = 1e-07 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 17/139 (12%) Frame = +1 Query: 163 KRIWKNLALPH-VKISLWLLHYHALATTECLEHRGIMIPPGCALCQVALES*QHMFFECE 339 K++WK +PH V +WLL A T + + RGI + C LC LE+ H+F C+ Sbjct: 289 KQVWK-CRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHCK 347 Query: 340 YLKE--------------VPARAKGHVGSL-SMNFLALRQCDLSVI-ADVWWSVWEERRC 471 Y ++ +P R + S LA + +I A +WW++W+ER Sbjct: 348 YTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNS 407 Query: 472 RCFGGASVSASNLSWEVLL 528 RCF G S ++ +L Sbjct: 408 RCFEGIENSVQDVKLNCIL 426 >ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum tuberosum] Length = 556 Score = 62.0 bits (149), Expect = 1e-07 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 17/139 (12%) Frame = +1 Query: 163 KRIWKNLALPH-VKISLWLLHYHALATTECLEHRGIMIPPGCALCQVALES*QHMFFECE 339 K++WK +PH V +WLL A T + + RGI + C LC LE+ H+F C+ Sbjct: 395 KQVWK-CRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHCK 453 Query: 340 YLKE--------------VPARAKGHVGSL-SMNFLALRQCDLSVI-ADVWWSVWEERRC 471 Y ++ +P R + S LA + +I A +WW++W+ER Sbjct: 454 YTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNS 513 Query: 472 RCFGGASVSASNLSWEVLL 528 RCF G S ++ +L Sbjct: 514 RCFEGIENSVQDVKLNCIL 532 >ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum] Length = 305 Score = 57.8 bits (138), Expect = 2e-06 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 16/128 (12%) Frame = +1 Query: 163 KRIWKNLALPHVKISLWLLHYHALATTECLEHRGIMIPPGCALCQVALES*QHMFFECEY 342 K IW+ P V W+ Y A T + ++ R I P C +C+ E+ +H+ CE Sbjct: 141 KLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQFPNRCYMCKKEAETPRHLLLHCEV 200 Query: 343 LKEV--------------PARAKGHVGSLSMNFL--ALRQCDLSVIADVWWSVWEERRCR 474 E+ P K S S+ + A+++ + + A ++WS+W ER R Sbjct: 201 ASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDKAIKKIWIMIPACIFWSIWLERNKR 260 Query: 475 CFGGASVS 498 CF G S + Sbjct: 261 CFDGESTA 268 >gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1319 Score = 57.0 bits (136), Expect = 4e-06 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 16/134 (11%) Frame = +1 Query: 157 LVKRIWKNLALPHVKISLWLLHYHALATTECLEHRGIMIPPGCALCQVALES*QHMFFEC 336 L ++W +P +K+ +W ALA + L RGI GC C+ +E+ H+ F+C Sbjct: 994 LFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHLLFQC 1053 Query: 337 EYLKEV--------PARAKG--------HVGSLSMNFLALRQCDLSVIADVWWSVWEERR 468 + ++V PA G HV S NF R +V + W +W+ R Sbjct: 1054 PFARQVWALSLIQAPATGFGTSIFSNINHVIQNSQNFGIPRHM-RTVSPWLLWEIWKNRN 1112 Query: 469 CRCFGGASVSASNL 510 F G +++S + Sbjct: 1113 KTLFQGTGLTSSEI 1126 >gb|EEE61501.1| hypothetical protein OsJ_15790 [Oryza sativa Japonica Group] Length = 285 Score = 56.6 bits (135), Expect = 5e-06 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 24/149 (16%) Frame = +1 Query: 154 CLV-KRIWKNLALPHVKISLWLLHYHALATTECLEHRGIMIPPGCALCQVALES*QHMFF 330 CL+ K IWK+ A K ++ +A T + L+ RG + P C LC +ES H+F Sbjct: 130 CLLGKIIWKSRAPERCKFFMFCAMKNACLTADNLQRRGWHLAPICHLCSKDIESCTHIFL 189 Query: 331 ECEYLKEVPARAKGHVG--------SLSMNFLALRQC---------DLSVIADVWWSVWE 459 C + +EV +G +G L + A R+ D VI V W +W+ Sbjct: 190 NCAFSREVWGLVRGRIGFLHAVPDDDLPTWWCAARKVVTKRERKTFDAGVIL-VTWLIWK 248 Query: 460 ERRCRCFGGASVSASNL------SWEVLL 528 ER R F G + S + L WE L Sbjct: 249 ERNARVFDGRASSPACLFATIKDEWETWL 277 >gb|EEE57924.1| hypothetical protein OsJ_08622 [Oryza sativa Japonica Group] Length = 390 Score = 55.8 bits (133), Expect = 8e-06 Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 24/161 (14%) Frame = +1 Query: 157 LVKRIWKNLALPHVKISLWLLHYHALATTECLEHRGIMIPPGCALCQVALES*QHMFFEC 336 L K IWK+ A K ++L +A T + L+ RG + P C LC ES QH+F C Sbjct: 223 LGKIIWKSRAPVRCKFFMFLAVRNACLTADNLQRRGWKLAPICHLCSKDGESCQHIFQAC 282 Query: 337 EYLKEVPARAKGHVGSLSMN---------FLALRQC---------DLSVIADVWWSVWEE 462 + ++V + + + SLS + +LA RQ D VI V W +W+E Sbjct: 283 TFSQQVWVKVQARL-SLSCSPPSSDFAGWWLAARQTVAKIDRKTFDAGVIL-VTWLIWKE 340 Query: 463 RRCRCFGGASVSASNL------SWEVLLGRKEGLESALRMS 567 R R F G + S + L WE + GL ++L ++ Sbjct: 341 RNARVFEGTASSVTQLCATMCEEWET--WKSAGLVTSLNVA 379