BLASTX nr result
ID: Ephedra28_contig00025906
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00025906 (362 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an... 57 2e-06 emb|CBI15364.3| unnamed protein product [Vitis vinifera] 57 2e-06 ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi... 57 3e-06 >ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1-like [Vitis vinifera] Length = 965 Score = 57.4 bits (137), Expect = 2e-06 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Frame = -2 Query: 295 MKGRTIPLQDAHKTXXXXXXXXXXXXSPVIIWDWQAKHLITGGP-DKTILIHKYXXXXXX 119 MKGR++ L++AHK+ I+WD +A+HL+T D +I IH Sbjct: 1 MKGRSLKLREAHKSSGAASFCS-------ILWDLRAQHLLTSSSNDLSICIHD----PLL 49 Query: 118 XXXXXXXXXXHKNSVTALAINPNAKTLASASADHSVKLY 2 H++ VTALA++PN+ LAS S DHSVKLY Sbjct: 50 PSNSPQILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88 >emb|CBI15364.3| unnamed protein product [Vitis vinifera] Length = 1427 Score = 57.4 bits (137), Expect = 2e-06 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Frame = -2 Query: 295 MKGRTIPLQDAHKTXXXXXXXXXXXXSPVIIWDWQAKHLITGGP-DKTILIHKYXXXXXX 119 MKGR++ L++AHK+ I+WD +A+HL+T D +I IH Sbjct: 1 MKGRSLKLREAHKSSGAASFCS-------ILWDLRAQHLLTSSSNDLSICIHD----PLL 49 Query: 118 XXXXXXXXXXHKNSVTALAINPNAKTLASASADHSVKLY 2 H++ VTALA++PN+ LAS S DHSVKLY Sbjct: 50 PSNSPQILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88 >ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis] gi|223543104|gb|EEF44638.1| WD-repeat protein, putative [Ricinus communis] Length = 775 Score = 56.6 bits (135), Expect = 3e-06 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Frame = -2 Query: 295 MKGRTIPLQDAHKTXXXXXXXXXXXXSPVIIWDWQAKHLITGGP-DKTILIHKYXXXXXX 119 MK RT+ L++AHK+ I+WD Q +HL+T D TI IH Sbjct: 1 MKIRTLKLREAHKSNGGHGPSFCS-----ILWDHQTRHLVTASSSDPTICIHD----PLL 51 Query: 118 XXXXXXXXXXHKNSVTALAINPNAKTLASASADHSVKLY 2 H++ VTAL+++PN+ LAS S DHSVKLY Sbjct: 52 LSNGPRILRHHRDGVTALSLSPNSTCLASGSIDHSVKLY 90