BLASTX nr result

ID: Ephedra28_contig00025906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025906
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...    57   2e-06
emb|CBI15364.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...    57   3e-06

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 MKGRTIPLQDAHKTXXXXXXXXXXXXSPVIIWDWQAKHLITGGP-DKTILIHKYXXXXXX 119
           MKGR++ L++AHK+               I+WD +A+HL+T    D +I IH        
Sbjct: 1   MKGRSLKLREAHKSSGAASFCS-------ILWDLRAQHLLTSSSNDLSICIHD----PLL 49

Query: 118 XXXXXXXXXXHKNSVTALAINPNAKTLASASADHSVKLY 2
                     H++ VTALA++PN+  LAS S DHSVKLY
Sbjct: 50  PSNSPQILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 MKGRTIPLQDAHKTXXXXXXXXXXXXSPVIIWDWQAKHLITGGP-DKTILIHKYXXXXXX 119
           MKGR++ L++AHK+               I+WD +A+HL+T    D +I IH        
Sbjct: 1   MKGRSLKLREAHKSSGAASFCS-------ILWDLRAQHLLTSSSNDLSICIHD----PLL 49

Query: 118 XXXXXXXXXXHKNSVTALAINPNAKTLASASADHSVKLY 2
                     H++ VTALA++PN+  LAS S DHSVKLY
Sbjct: 50  PSNSPQILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 MKGRTIPLQDAHKTXXXXXXXXXXXXSPVIIWDWQAKHLITGGP-DKTILIHKYXXXXXX 119
           MK RT+ L++AHK+               I+WD Q +HL+T    D TI IH        
Sbjct: 1   MKIRTLKLREAHKSNGGHGPSFCS-----ILWDHQTRHLVTASSSDPTICIHD----PLL 51

Query: 118 XXXXXXXXXXHKNSVTALAINPNAKTLASASADHSVKLY 2
                     H++ VTAL+++PN+  LAS S DHSVKLY
Sbjct: 52  LSNGPRILRHHRDGVTALSLSPNSTCLASGSIDHSVKLY 90


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